RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 SAR1AQ9NR31 198 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 RPRMQ9NS64 109 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 V9GYV3 84 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 ITPR1Q14643 2758 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 OVOS2A0A0J9YW53 1432 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 PTPRGP23470 1445 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 OVOS2Q6IE36 1432 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 ALPK3Q96L96 1907 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 COL7A1Q02388 2944 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 FER1L6Q2WGJ9 1857 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 MAP1AP78559 2803 aaPredicted RBP0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 HMGXB3Q12766 1538 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 PDE4DIPQ5VU43 2346 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 RREB1Q92766 1687 aa0.18□□□□□ -2.38
TGFBR1-210ENST00000552573 TNRC6AQ8NDV7 1962 aaKnown RBP0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 KIAA1549Q9HCM3 1950 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 COL12A1Q99715 3063 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 POLEQ07864 2286 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 PTPRMP28827 1452 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 LOC285556D6RIA3 1793 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 PTPRFP10586 1907 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 NCOA6Q14686 2063 aaPredicted RBP0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 FAM186AA6NE01 2351 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 CFAP47Q6ZTR5 3102 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 A0A087WTM6 91 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 TRAV1-2A0A0B4J238 106 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 TEX49A0A1B0GTD5 131 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 LOC100130705A0A1B0GUX0 176 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 A0A1B0GV90 55 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 SPAARA0A1B0GVQ0 90 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 RBAKDNA6NC62 111 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 MIF4GDA9UHW6 222 aaKnown RBP0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 CCDC179H3BU77 68 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 CITO14578 2027 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 SNAPC5O75971 98 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 NDUFB6O95139 128 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 TSPAN19P0C672 248 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 CCL3L1P16619 93 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 GCHFRP30047 84 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 RP1P56715 2156 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 EDDM3BP56851 147 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 INSL4Q14641 139 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 ALPK2Q86TB3 2170 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 ATOH7Q8N100 152 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 TSLPQ969D9 159 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 ARL11Q969Q4 196 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 Q96NJ1 140 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 LINC00470Q9BZP3 86 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 C10orf95Q9H7T3 257 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 LINC00312Q9Y6C7 94 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 EML5Q05BV3 1969 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 APCP25054 2843 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 SPTBN2O15020 2390 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 OTOGQ6ZRI0 2925 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 PTPRDP23468 1912 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 MYCBP2O75592 4640 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 MUC12Q9UKN1 5478 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 UBR2Q8IWV8 1755 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 KIDINS220Q9ULH0 1771 aa0.17□□□□□ -2.38
TGFBR1-210ENST00000552573 ZCCHC11Q5TAX3 1644 aaKnown RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 BRWD1Q9NSI6 2320 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 PRRC2CQ9Y520 2896 aaKnown RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 MKI67P46013 3256 aaKnown RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 PLXNA4Q9HCM2 1894 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 BCORL1Q5H9F3 1711 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 UNC13AQ9UPW8 1703 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 TET1Q8NFU7 2136 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 RELNP78509 3460 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 PRG4Q92954 1404 aaPredicted RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 SRRM2Q9UQ35 2752 aaKnown RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 CSMD1Q96PZ7 3565 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 TRAV12-2A0A075B6T6 113 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 A0A096LNT2 108 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 GVQW2A0A096LPI5 108 aaPredicted RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 HCG22E2RYF7 251 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 PPP1R17O96001 155 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 HMGN1P05114 100 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 NMBP08949 121 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 CBLN1P23435 193 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 S100A12P80511 92 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 EMX2Q04743 252 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 CATR1Q13166 79 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 C10orf128Q5T292 105 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 C10orf99Q6UWK7 81 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 Q6ZRX8 168 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 DEFB132Q7Z7B7 95 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 PPP1R1CQ8WVI7 109 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 LSM10Q969L4 123 aaKnown RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 PRR15LQ9BU68 103 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 TMEM191AQ9H0A3 160 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 AGPAT4-IT1Q9H0P7 198 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 PAIP2BQ9ULR5 123 aaKnown RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 MYLKQ15746 1914 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 INTS1Q8N201 2190 aaKnown RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 CASZ1Q86V15 1759 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 ROCK2O75116 1388 aaKnown RBP0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 ANK1P16157 1881 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 IQSEC2Q5JU85 1478 aa0.16□□□□□ -2.38
TGFBR1-210ENST00000552573 DSPP15924 2871 aaKnown RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms