RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 INO80EQ8NBZ0 244 aaPredicted RBP9.48□□□□□ -0.89
TMEM106C-216ENST00000551305 MAP1LC3B2A6NCE7 125 aa9.47□□□□□ -0.89
TMEM106C-216ENST00000551305 AKR1C3P42330 323 aa9.47□□□□□ -0.89
TMEM106C-216ENST00000551305 RBX1P62877 108 aa9.47□□□□□ -0.89
TMEM106C-216ENST00000551305 MAP1LC3BQ9GZQ8 125 aa9.47□□□□□ -0.89
TMEM106C-216ENST00000551305 PRR34Q9NV39 138 aa9.47□□□□□ -0.89
TMEM106C-216ENST00000551305 FXYD6-FXYD2A0A087WZ82 144 aa9.46□□□□□ -0.9
TMEM106C-216ENST00000551305 F5H697 171 aa9.46□□□□□ -0.9
TMEM106C-216ENST00000551305 ZNF471Q9BX82 626 aaPredicted RBP9.46□□□□□ -0.9
TMEM106C-216ENST00000551305 DERL1Q9BUN8 251 aa9.45□□□□□ -0.9
TMEM106C-216ENST00000551305 IGLV10-54A0A075B6I4 117 aa9.44□□□□□ -0.9
TMEM106C-216ENST00000551305 GIPP09681 153 aaPredicted RBP9.44□□□□□ -0.9
TMEM106C-216ENST00000551305 FHITP49789 147 aa9.44□□□□□ -0.9
TMEM106C-216ENST00000551305 PKIAP61925 76 aa9.44□□□□□ -0.9
TMEM106C-216ENST00000551305 SPANXN1Q5VSR9 72 aa9.44□□□□□ -0.9
TMEM106C-216ENST00000551305 Q6ZRU5 148 aa9.44□□□□□ -0.9
TMEM106C-216ENST00000551305 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.44□□□□□ -0.9
TMEM106C-216ENST00000551305 STOML3Q8TAV4 291 aa9.44□□□□□ -0.9
TMEM106C-216ENST00000551305 VAX2Q9UIW0 290 aa9.44□□□□□ -0.9
TMEM106C-216ENST00000551305 A0A0D9SG52 128 aa9.43□□□□□ -0.9
TMEM106C-216ENST00000551305 SNAI2O43623 268 aa9.43□□□□□ -0.9
TMEM106C-216ENST00000551305 PAGE4O60829 102 aa9.43□□□□□ -0.9
TMEM106C-216ENST00000551305 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
TMEM106C-216ENST00000551305 KIF25-AS1Q9Y6Z4 181 aa9.43□□□□□ -0.9
TMEM106C-216ENST00000551305 hDV102S1A0JD36 115 aa9.42□□□□□ -0.9
TMEM106C-216ENST00000551305 SLPIP03973 132 aa9.42□□□□□ -0.9
TMEM106C-216ENST00000551305 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
TMEM106C-216ENST00000551305 REG3AQ06141 175 aa9.42□□□□□ -0.9
TMEM106C-216ENST00000551305 TMEM97Q5BJF2 176 aa9.42□□□□□ -0.9
TMEM106C-216ENST00000551305 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
TMEM106C-216ENST00000551305 DPH3Q96FX2 82 aa9.42□□□□□ -0.9
TMEM106C-216ENST00000551305 CYTL1Q9NRR1 136 aa9.42□□□□□ -0.9
TMEM106C-216ENST00000551305 TRBV25-1A0A075B6N4 114 aa9.41□□□□□ -0.9
TMEM106C-216ENST00000551305 CXCL1P09341 107 aa9.41□□□□□ -0.9
TMEM106C-216ENST00000551305 OR5AL1P0C617 328 aa9.41□□□□□ -0.9
TMEM106C-216ENST00000551305 RAB5CP51148 216 aa9.41□□□□□ -0.9
TMEM106C-216ENST00000551305 CIRBPQ14011 172 aaKnown RBP9.41□□□□□ -0.9
TMEM106C-216ENST00000551305 C20orf203Q8NBC4 194 aa9.41□□□□□ -0.9
TMEM106C-216ENST00000551305 TCEAL7Q9BRU2 100 aa9.41□□□□□ -0.9
TMEM106C-216ENST00000551305 MLST8Q9BVC4 326 aa9.41□□□□□ -0.9
TMEM106C-216ENST00000551305 A0A087WYN8 130 aa9.4□□□□□ -0.9
TMEM106C-216ENST00000551305 A0A1B0GV50 99 aa9.4□□□□□ -0.9
TMEM106C-216ENST00000551305 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
TMEM106C-216ENST00000551305 CNBPP62633 177 aaKnown RBP9.4□□□□□ -0.9
TMEM106C-216ENST00000551305 IQCJQ1A5X6 159 aa9.4□□□□□ -0.9
TMEM106C-216ENST00000551305 BAGE2Q86Y30 109 aa9.4□□□□□ -0.9
TMEM106C-216ENST00000551305 GFRA4Q9GZZ7 299 aa9.4□□□□□ -0.9
TMEM106C-216ENST00000551305 IGLV4-60A0A075B6I1 120 aa9.39□□□□□ -0.91
TMEM106C-216ENST00000551305 IGHV1-24A0A0C4DH33 117 aa9.39□□□□□ -0.91
TMEM106C-216ENST00000551305 G3V3Q6 166 aa9.39□□□□□ -0.91
TMEM106C-216ENST00000551305 SMIM17P0DL12 118 aa9.39□□□□□ -0.91
TMEM106C-216ENST00000551305 IGHV3-64A0A075B6Q5 118 aa9.38□□□□□ -0.91
TMEM106C-216ENST00000551305 S100A9P06702 114 aaKnown RBP9.38□□□□□ -0.91
TMEM106C-216ENST00000551305 MGPP08493 103 aa9.38□□□□□ -0.91
TMEM106C-216ENST00000551305 M0QY20 66 aa9.37□□□□□ -0.91
TMEM106C-216ENST00000551305 ARPC5O15511 151 aa9.37□□□□□ -0.91
TMEM106C-216ENST00000551305 GZMBP10144 247 aa9.37□□□□□ -0.91
TMEM106C-216ENST00000551305 SFT2D1Q8WV19 159 aa9.37□□□□□ -0.91
TMEM106C-216ENST00000551305 ODF1Q14990 250 aa9.37□□□□□ -0.91
TMEM106C-216ENST00000551305 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
TMEM106C-216ENST00000551305 SPACA4Q8TDM5 124 aa9.37□□□□□ -0.91
TMEM106C-216ENST00000551305 AP1S3Q96PC3 154 aa9.37□□□□□ -0.91
TMEM106C-216ENST00000551305 AP5S1Q9NUS5 200 aa9.37□□□□□ -0.91
TMEM106C-216ENST00000551305 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
TMEM106C-216ENST00000551305 PHOX2AO14813 284 aa9.36□□□□□ -0.91
TMEM106C-216ENST00000551305 P01737 135 aa9.36□□□□□ -0.91
TMEM106C-216ENST00000551305 NKX2-5P52952 324 aaPredicted RBP9.36□□□□□ -0.91
TMEM106C-216ENST00000551305 TMUB2Q71RG4 321 aa9.36□□□□□ -0.91
TMEM106C-216ENST00000551305 FAM213BQ8TBF2 198 aa9.36□□□□□ -0.91
TMEM106C-216ENST00000551305 MBD3L1Q8WWY6 194 aa9.36□□□□□ -0.91
TMEM106C-216ENST00000551305 TPPP3Q9BW30 176 aa9.36□□□□□ -0.91
TMEM106C-216ENST00000551305 LRP2P98164 4655 aa9.35□□□□□ -0.91
TMEM106C-216ENST00000551305 RNF185Q96GF1 192 aa9.35□□□□□ -0.91
TMEM106C-216ENST00000551305 TMEM243Q9BU79 118 aa9.35□□□□□ -0.91
TMEM106C-216ENST00000551305 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
TMEM106C-216ENST00000551305 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
TMEM106C-216ENST00000551305 SMLR1H3BR10 107 aa9.34□□□□□ -0.91
TMEM106C-216ENST00000551305 PFDN1O60925 122 aa9.34□□□□□ -0.91
TMEM106C-216ENST00000551305 PLAC8Q9NZF1 115 aa9.34□□□□□ -0.91
TMEM106C-216ENST00000551305 RPL35P42766 123 aaKnown RBP9.33□□□□□ -0.92
TMEM106C-216ENST00000551305 COX6A2Q02221 97 aa9.33□□□□□ -0.92
TMEM106C-216ENST00000551305 C15orf56Q8N910 161 aa9.33□□□□□ -0.92
TMEM106C-216ENST00000551305 DPH3P1Q9H4G8 78 aa9.33□□□□□ -0.92
TMEM106C-216ENST00000551305 GAGE12HA6NDE8 117 aa9.32□□□□□ -0.92
TMEM106C-216ENST00000551305 H7C1H1 209 aa9.32□□□□□ -0.92
TMEM106C-216ENST00000551305 IGLC6P0CF74 106 aa9.32□□□□□ -0.92
TMEM106C-216ENST00000551305 KCNRGQ8N5I3 272 aa9.32□□□□□ -0.92
TMEM106C-216ENST00000551305 FER1L6-AS1Q8NA97 138 aa9.32□□□□□ -0.92
TMEM106C-216ENST00000551305 GTSF1Q8WW33 167 aa9.32□□□□□ -0.92
TMEM106C-216ENST00000551305 RNF213Q63HN8 5207 aa9.32□□□□□ -0.92
TMEM106C-216ENST00000551305 TNXBP22105 4242 aa9.31□□□□□ -0.92
TMEM106C-216ENST00000551305 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
TMEM106C-216ENST00000551305 MAJINQ3KP22 176 aa9.31□□□□□ -0.92
TMEM106C-216ENST00000551305 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
TMEM106C-216ENST00000551305 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
TMEM106C-216ENST00000551305 PRSS3P2Q8NHM4 247 aa9.31□□□□□ -0.92
TMEM106C-216ENST00000551305 C7orf33Q8WU49 177 aa9.31□□□□□ -0.92
TMEM106C-216ENST00000551305 IGKV2-24A0A0C4DH68 120 aa9.3□□□□□ -0.92
TMEM106C-216ENST00000551305 UBE2L6O14933 153 aa9.3□□□□□ -0.92
TMEM106C-216ENST00000551305 SULT1A2P50226 295 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms