RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 TMEM133Q9H2Q1 129 aa2.59□□□□□ -1.99
HCFC2-204ENST00000550335 CUBNO60494 3623 aa2.59□□□□□ -2
HCFC2-204ENST00000550335 DOCK11Q5JSL3 2073 aa2.59□□□□□ -2
HCFC2-204ENST00000550335 MAP1AP78559 2803 aaPredicted RBP2.59□□□□□ -2
HCFC2-204ENST00000550335 ODAMA1E959 279 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 M0QZK8 103 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 SDCBPO00560 298 aaPredicted RBP2.58□□□□□ -2
HCFC2-204ENST00000550335 CRYGAP11844 174 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 CCL3L1P16619 93 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 BRS3P32247 399 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 ATP5G3P48201 142 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 PIGPP57054 158 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 HSPE1P61604 102 aaKnown RBP2.58□□□□□ -2
HCFC2-204ENST00000550335 C7orf65Q6ZTY9 151 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 C12orf45Q8N5I9 185 aaPredicted RBP2.58□□□□□ -2
HCFC2-204ENST00000550335 OR13C6PQ8NH95 151 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 NEK7Q8TDX7 302 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 C2orf50Q96LR7 162 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 GPER1Q99527 375 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 CST11Q9H112 138 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 TAS2R4Q9NYW5 299 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 SS18L2Q9UHA2 77 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 LSM2Q9Y333 95 aaKnown RBP2.58□□□□□ -2
HCFC2-204ENST00000550335 AMMECR1Q9Y4X0 333 aaPredicted RBP2.58□□□□□ -2
HCFC2-204ENST00000550335 ATRQ13535 2644 aa2.58□□□□□ -2
HCFC2-204ENST00000550335 FBN1P35555 2871 aaKnown RBP2.58□□□□□ -2
HCFC2-204ENST00000550335 WNK2Q9Y3S1 2297 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 MEIKINA0A087WXM9 373 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 TMEM30CPA0ZSE6 113 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 MCRIP1C9JLW8 97 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 H3BSH0 61 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 H3BUX3 64 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 PIN1P1O15428 100 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 NAPSAO96009 420 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 PMP2P02689 132 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 TFF1P04155 84 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 G6PCP35575 357 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 ZNF137PP52743 207 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 YPEL3P61236 119 aaPredicted RBP2.57□□□□□ -2
HCFC2-204ENST00000550335 KLRD1Q13241 179 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 HSD17B12Q53GQ0 312 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 GLIPR1L1Q6UWM5 242 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 LCN15Q6UWW0 184 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 LCA10Q71F78 164 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 LINC00311Q8N616 119 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 Q9H521 79 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 SOX21Q9Y651 276 aaPredicted RBP2.57□□□□□ -2
HCFC2-204ENST00000550335 COL6A5A8TX70 2615 aa2.57□□□□□ -2
HCFC2-204ENST00000550335 ANK3Q12955 4377 aaKnown RBP2.56□□□□□ -2
HCFC2-204ENST00000550335 TRAV1-2A0A0B4J238 106 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 TRAV4A0A0B4J268 109 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 TRDV1A0A1B0GX56 115 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 TMEM14DPA8MWL7 114 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 AIPO00170 330 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 PDCD5O14737 125 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 OVOL1O14753 267 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 GEMIN2O14893 280 aaKnown RBP2.56□□□□□ -2
HCFC2-204ENST00000550335 YPEL1O60688 119 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 IFNA1P01562 189 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 IFNA7P01567 189 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 IGKV1-16P04430 117 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 METTL15P1P0C7V9 234 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 SRIP30626 198 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 QRFPP83859 136 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 PIGYQ3MUY2 71 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 LINC01554Q52M75 96 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 TRIQKQ629K1 86 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 IZUMO2Q6UXV1 221 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 PDZD9Q8IXQ8 264 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 SPACA4Q8TDM5 124 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 ZCCHC13Q8WW36 166 aaKnown RBP2.56□□□□□ -2
HCFC2-204ENST00000550335 YPEL2Q96QA6 119 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 HSPB9Q9BQS6 159 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 JPT1Q9UK76 154 aa2.56□□□□□ -2
HCFC2-204ENST00000550335 DNHD1Q96M86 4753 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 GNG5P63218 68 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 HMGN3Q15651 99 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 MORN2Q502X0 79 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 TMEM91Q6ZNR0 172 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 LYG2Q86SG7 212 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 NDUFA11Q86Y39 141 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 OR10K1Q8NGX5 313 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 ARL11Q969Q4 196 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 LPAR5Q9H1C0 372 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 MXRA5Q9NR99 2828 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 TRAPPC2LQ9UL33 140 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 HILPDAQ9Y5L2 63 aa2.55□□□□□ -2
HCFC2-204ENST00000550335 PNMA8CA0A1B0GUJ8 204 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 IFITM5A6NNB3 132 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 NDUFC2O95298 119 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 CRPP02741 224 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 NFYBP25208 207 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 RPS25P62851 125 aaKnown RBP2.54□□□□□ -2
HCFC2-204ENST00000550335 BLCAPP62952 87 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 PRB3Q04118 309 aaPredicted RBP2.54□□□□□ -2
HCFC2-204ENST00000550335 ZNF345Q14585 488 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 SMIM20Q8N5G0 67 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 Q8N6K4 173 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 C5orf56Q8N8D9 126 aa2.54□□□□□ -2
HCFC2-204ENST00000550335 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms