RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TRAV26-2A0A0B4J265 109 aa14.58□□□□□ -0.08
CACNB3-210ENST00000548874 RPL36AP83881 106 aaKnown RBP14.58□□□□□ -0.08
CACNB3-210ENST00000548874 RPL36ALQ969Q0 106 aaKnown RBP14.58□□□□□ -0.08
CACNB3-210ENST00000548874 TRBV7-3A0A075B6L6 115 aa14.57□□□□□ -0.08
CACNB3-210ENST00000548874 LGALS9CQ6DKI2 356 aa14.57□□□□□ -0.08
CACNB3-210ENST00000548874 ZNRF2Q8NHG8 242 aa14.57□□□□□ -0.08
CACNB3-210ENST00000548874 MRAP2Q96G30 205 aa14.57□□□□□ -0.08
CACNB3-210ENST00000548874 DNAJC30Q96LL9 226 aa14.57□□□□□ -0.08
CACNB3-210ENST00000548874 UBE2D3P61077 147 aa14.56□□□□□ -0.08
CACNB3-210ENST00000548874 UBE2D2P62837 147 aa14.56□□□□□ -0.08
CACNB3-210ENST00000548874 ELOBQ15370 118 aa14.56□□□□□ -0.08
CACNB3-210ENST00000548874 ESRGQ1W209 222 aa14.56□□□□□ -0.08
CACNB3-210ENST00000548874 NIT2Q9NQR4 276 aa14.56□□□□□ -0.08
CACNB3-210ENST00000548874 MRPL51Q4U2R6 128 aaKnown RBP14.55□□□□□ -0.08
CACNB3-210ENST00000548874 LYPD5Q6UWN5 251 aa14.55□□□□□ -0.08
CACNB3-210ENST00000548874 ATP6V0E2Q8NHE4 81 aa14.55□□□□□ -0.08
CACNB3-210ENST00000548874 LINC00476Q8WZB0 136 aa14.55□□□□□ -0.08
CACNB3-210ENST00000548874 GAS8-AS1O95177 125 aa14.54□□□□□ -0.08
CACNB3-210ENST00000548874 CCL18P55774 89 aa14.54□□□□□ -0.08
CACNB3-210ENST00000548874 TIRAPP58753 221 aa14.54□□□□□ -0.08
CACNB3-210ENST00000548874 YPEL4Q96NS1 127 aa14.54□□□□□ -0.08
CACNB3-210ENST00000548874 LINC00588Q9Y4M8 146 aa14.54□□□□□ -0.08
CACNB3-210ENST00000548874 TRBV24-1A0A075B6N3 115 aa14.53□□□□□ -0.08
CACNB3-210ENST00000548874 TMEM136Q6ZRR5 245 aa14.53□□□□□ -0.08
CACNB3-210ENST00000548874 RPL39LQ96EH5 51 aaKnown RBP14.53□□□□□ -0.08
CACNB3-210ENST00000548874 TGIF2-C20orf24A0A0A6YYL0 155 aa14.52□□□□□ -0.09
CACNB3-210ENST00000548874 CBLN2Q8IUK8 224 aa14.52□□□□□ -0.09
CACNB3-210ENST00000548874 GTSF1LQ9H1H1 148 aa14.52□□□□□ -0.09
CACNB3-210ENST00000548874 SMCO4Q9NRQ5 59 aa14.52□□□□□ -0.09
CACNB3-210ENST00000548874 TNFRSF18Q9Y5U5 241 aa14.52□□□□□ -0.09
CACNB3-210ENST00000548874 TRBV6-5A0A0K0K1A5 114 aa14.51□□□□□ -0.09
CACNB3-210ENST00000548874 SMKR1H3BMG3 65 aa14.51□□□□□ -0.09
CACNB3-210ENST00000548874 RPS10P46783 165 aaKnown RBP14.51□□□□□ -0.09
CACNB3-210ENST00000548874 COX19Q49B96 90 aa14.51□□□□□ -0.09
CACNB3-210ENST00000548874 MRPS16Q9Y3D3 137 aaKnown RBP14.51□□□□□ -0.09
CACNB3-210ENST00000548874 ALMS1Q8TCU4 4167 aa14.5□□□□□ -0.09
CACNB3-210ENST00000548874 NCR2O95944 276 aa14.5□□□□□ -0.09
CACNB3-210ENST00000548874 UBE2DNLQ8IWF7 75 aa14.5□□□□□ -0.09
CACNB3-210ENST00000548874 NRACQ8N912 160 aa14.5□□□□□ -0.09
CACNB3-210ENST00000548874 GNB1LQ9BYB4 327 aa14.5□□□□□ -0.09
CACNB3-210ENST00000548874 LCE6AA0A183 80 aa14.49□□□□□ -0.09
CACNB3-210ENST00000548874 HLA-DQA1P01909 254 aa14.49□□□□□ -0.09
CACNB3-210ENST00000548874 OR10J3Q5JRS4 329 aa14.49□□□□□ -0.09
CACNB3-210ENST00000548874 DAZ4Q86SG3 579 aaKnown RBP14.49□□□□□ -0.09
CACNB3-210ENST00000548874 UPK3BQ9BT76 320 aa14.49□□□□□ -0.09
CACNB3-210ENST00000548874 DAZ3Q9NR90 486 aaKnown RBP14.49□□□□□ -0.09
CACNB3-210ENST00000548874 D6R8Y8 96 aa14.48□□□□□ -0.09
CACNB3-210ENST00000548874 ATP6V1G1O75348 118 aa14.48□□□□□ -0.09
CACNB3-210ENST00000548874 LY6G6CO95867 125 aa14.48□□□□□ -0.09
CACNB3-210ENST00000548874 PPP1R17O96001 155 aa14.48□□□□□ -0.09
CACNB3-210ENST00000548874 PPBPP02775 128 aa14.48□□□□□ -0.09
CACNB3-210ENST00000548874 CKS2P33552 79 aa14.48□□□□□ -0.09
CACNB3-210ENST00000548874 IGHV3-38A0A0C4DH36 116 aa14.47□□□□□ -0.09
CACNB3-210ENST00000548874 SDHAF1A6NFY7 115 aa14.46□□□□□ -0.09
CACNB3-210ENST00000548874 MT-ND6P03923 174 aa14.46□□□□□ -0.09
CACNB3-210ENST00000548874 S100A1P23297 94 aa14.46□□□□□ -0.09
CACNB3-210ENST00000548874 LELP1Q5T871 98 aa14.46□□□□□ -0.09
CACNB3-210ENST00000548874 ORMDL3Q8N138 153 aa14.46□□□□□ -0.09
CACNB3-210ENST00000548874 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.46□□□□□ -0.09
CACNB3-210ENST00000548874 ST20Q9HBF5 79 aa14.46□□□□□ -0.09
CACNB3-210ENST00000548874 DNAH1Q9P2D7 4330 aa14.46□□□□□ -0.1
CACNB3-210ENST00000548874 VPS13DQ5THJ4 4388 aa14.45□□□□□ -0.1
CACNB3-210ENST00000548874 TMEM70Q9BUB7 260 aa14.45□□□□□ -0.1
CACNB3-210ENST00000548874 PHOX2AO14813 284 aa14.44□□□□□ -0.1
CACNB3-210ENST00000548874 TNFRSF6BO95407 300 aa14.44□□□□□ -0.1
CACNB3-210ENST00000548874 POLR2KP53803 58 aaKnown RBP14.44□□□□□ -0.1
CACNB3-210ENST00000548874 NPYP01303 97 aa14.43□□□□□ -0.1
CACNB3-210ENST00000548874 APCSP02743 223 aa14.43□□□□□ -0.1
CACNB3-210ENST00000548874 SUMO2P61956 95 aaKnown RBP14.43□□□□□ -0.1
CACNB3-210ENST00000548874 TMEM97Q5BJF2 176 aa14.43□□□□□ -0.1
CACNB3-210ENST00000548874 NTM-AS1Q6ZSK4 140 aa14.43□□□□□ -0.1
CACNB3-210ENST00000548874 PRELID3AQ96N28 172 aa14.43□□□□□ -0.1
CACNB3-210ENST00000548874 C20orf78Q9BR46 151 aa14.43□□□□□ -0.1
CACNB3-210ENST00000548874 LYSTQ99698 3801 aa14.42□□□□□ -0.1
CACNB3-210ENST00000548874 TRBV6-8A0A0A6YYG3 113 aa14.42□□□□□ -0.1
CACNB3-210ENST00000548874 TRBV27A0A0K0K1C4 114 aa14.42□□□□□ -0.1
CACNB3-210ENST00000548874 SCO1O75880 301 aa14.42□□□□□ -0.1
CACNB3-210ENST00000548874 LAMTOR2Q9Y2Q5 125 aa14.42□□□□□ -0.1
CACNB3-210ENST00000548874 RPL32P62910 135 aaKnown RBP14.41□□□□□ -0.1
CACNB3-210ENST00000548874 WFDC10BQ8IUB3 73 aa14.41□□□□□ -0.1
CACNB3-210ENST00000548874 MRPL18Q9H0U6 180 aaKnown RBP14.41□□□□□ -0.1
CACNB3-210ENST00000548874 TRAV8-6A0A0B4J262 113 aa14.4□□□□□ -0.1
CACNB3-210ENST00000548874 KIAA1644Q3SXP7 199 aa14.4□□□□□ -0.1
CACNB3-210ENST00000548874 Q9H8V8 135 aa14.4□□□□□ -0.1
CACNB3-210ENST00000548874 I3L3M4 83 aa14.39□□□□□ -0.11
CACNB3-210ENST00000548874 COTL1Q14019 142 aa14.39□□□□□ -0.11
CACNB3-210ENST00000548874 IQCJQ1A5X6 159 aa14.39□□□□□ -0.11
CACNB3-210ENST00000548874 KMT2CQ8NEZ4 4911 aaKnown RBP14.38□□□□□ -0.11
CACNB3-210ENST00000548874 COLCA2A8K830 154 aa14.38□□□□□ -0.11
CACNB3-210ENST00000548874 PRSS47A8MTI9 375 aa14.38□□□□□ -0.11
CACNB3-210ENST00000548874 VCYO14598 125 aa14.38□□□□□ -0.11
CACNB3-210ENST00000548874 SIVA1O15304 175 aa14.38□□□□□ -0.11
CACNB3-210ENST00000548874 FABP9Q0Z7S8 132 aa14.38□□□□□ -0.11
CACNB3-210ENST00000548874 TRAPPC1Q9Y5R8 145 aa14.38□□□□□ -0.11
CACNB3-210ENST00000548874 SACSQ9NZJ4 4579 aa14.38□□□□□ -0.11
CACNB3-210ENST00000548874 IGHV1-24A0A0C4DH33 117 aa14.37□□□□□ -0.11
CACNB3-210ENST00000548874 DNAH10OSP0CZ25 163 aa14.37□□□□□ -0.11
CACNB3-210ENST00000548874 PMCHP20382 165 aa14.37□□□□□ -0.11
CACNB3-210ENST00000548874 DEFB104AQ8WTQ1 72 aa14.37□□□□□ -0.11
CACNB3-210ENST00000548874 SMIM2Q9BVW6 85 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms