RNA–Protein interactions for RNA: ENST00000547856.5

RAPGEF3-216, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,659 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-216ENST00000547856 C20orf173Q96LM9 149 aa10.71□□□□□ -0.69
RAPGEF3-216ENST00000547856 KAAG1Q9UBP8 84 aa10.71□□□□□ -0.69
RAPGEF3-216ENST00000547856 ABCA4P78363 2273 aa10.71□□□□□ -0.69
RAPGEF3-216ENST00000547856 SUMO4Q6EEV6 95 aa10.71□□□□□ -0.69
RAPGEF3-216ENST00000547856 LINC01600Q96MT4 127 aa10.71□□□□□ -0.69
RAPGEF3-216ENST00000547856 TIMM17AQ99595 171 aa10.71□□□□□ -0.69
RAPGEF3-216ENST00000547856 A8MZ25 164 aa10.71□□□□□ -0.7
RAPGEF3-216ENST00000547856 RS1O15537 224 aa10.71□□□□□ -0.7
RAPGEF3-216ENST00000547856 LY6DQ14210 128 aa10.71□□□□□ -0.7
RAPGEF3-216ENST00000547856 IGKV3-7A0A075B6H7 116 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 hADV29S1A0JD25 119 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 LST1O00453 97 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 VCYO14598 125 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 LRRC75A-AS1Q8N1F1 130 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 DAND5Q8N907 189 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 SPTA1P02549 2419 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 F6UB75 175 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 K7ENP7 123 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 IGF2RP11717 2491 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 POLR2KP53803 58 aaKnown RBP10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 CYSTM1Q9H1C7 97 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 DPM3Q9P2X0 92 aa10.7□□□□□ -0.7
RAPGEF3-216ENST00000547856 TRAV21A0A0B4J279 112 aa10.69□□□□□ -0.7
RAPGEF3-216ENST00000547856 PPP1R17O96001 155 aa10.69□□□□□ -0.7
RAPGEF3-216ENST00000547856 RNASE3P12724 160 aaKnown RBP10.69□□□□□ -0.7
RAPGEF3-216ENST00000547856 ZFAND2AQ8N6M9 145 aa10.69□□□□□ -0.7
RAPGEF3-216ENST00000547856 NPBQ8NG41 125 aa10.69□□□□□ -0.7
RAPGEF3-216ENST00000547856 KIR2DL5BQ8NHK3 375 aa10.69□□□□□ -0.7
RAPGEF3-216ENST00000547856 IGHV3-30-3P0DP02 117 aa10.68□□□□□ -0.7
RAPGEF3-216ENST00000547856 DEFB121Q5J5C9 76 aa10.68□□□□□ -0.7
RAPGEF3-216ENST00000547856 NBASA2RRP1 2371 aa10.68□□□□□ -0.7
RAPGEF3-216ENST00000547856 RHOHQ15669 191 aa10.68□□□□□ -0.7
RAPGEF3-216ENST00000547856 VMO1Q7Z5L0 202 aa10.68□□□□□ -0.7
RAPGEF3-216ENST00000547856 LITAFQ99732 161 aa10.68□□□□□ -0.7
RAPGEF3-216ENST00000547856 TRAV25A0A0B4J276 109 aa10.67□□□□□ -0.7
RAPGEF3-216ENST00000547856 LINC00315P59091 139 aa10.67□□□□□ -0.7
RAPGEF3-216ENST00000547856 RNASE13Q5GAN3 156 aaKnown RBP10.67□□□□□ -0.7
RAPGEF3-216ENST00000547856 NSUN5P1Q3KNT7 163 aa10.67□□□□□ -0.7
RAPGEF3-216ENST00000547856 OR13C6PQ8NH95 151 aa10.67□□□□□ -0.7
RAPGEF3-216ENST00000547856 IMUPQ9GZP8 106 aa10.67□□□□□ -0.7
RAPGEF3-216ENST00000547856 COX7CP15954 63 aa10.66□□□□□ -0.7
RAPGEF3-216ENST00000547856 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF3-216ENST00000547856 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
RAPGEF3-216ENST00000547856 LINC01560Q8TB33 94 aa10.66□□□□□ -0.7
RAPGEF3-216ENST00000547856 TIMM21Q9BVV7 248 aa10.66□□□□□ -0.7
RAPGEF3-216ENST00000547856 ANKHD1Q8IWZ3 2542 aaKnown RBP10.66□□□□□ -0.7
RAPGEF3-216ENST00000547856 ATRXP46100 2492 aa10.65□□□□□ -0.7
RAPGEF3-216ENST00000547856 HRNRQ86YZ3 2850 aaPredicted RBP10.65□□□□□ -0.7
RAPGEF3-216ENST00000547856 LINC00643Q86TS7 51 aa10.65□□□□□ -0.7
RAPGEF3-216ENST00000547856 KIF25-AS1Q9Y6Z4 181 aa10.65□□□□□ -0.7
RAPGEF3-216ENST00000547856 GRNP28799 593 aaKnown RBP10.65□□□□□ -0.7
RAPGEF3-216ENST00000547856 MUC4Q99102 2169 aa10.65□□□□□ -0.71
RAPGEF3-216ENST00000547856 IGHV7-81A0A0B4J1V7 117 aa10.64□□□□□ -0.71
RAPGEF3-216ENST00000547856 TRAV13-1A0A0B4J241 112 aa10.64□□□□□ -0.71
RAPGEF3-216ENST00000547856 A0A1B0GX51 115 aa10.64□□□□□ -0.71
RAPGEF3-216ENST00000547856 KLRB1Q12918 225 aa10.64□□□□□ -0.71
RAPGEF3-216ENST00000547856 C4orf26Q17RF5 130 aa10.64□□□□□ -0.71
RAPGEF3-216ENST00000547856 CCDC140Q96MF4 163 aa10.64□□□□□ -0.71
RAPGEF3-216ENST00000547856 A0A0U1RRA0 63 aa10.63□□□□□ -0.71
RAPGEF3-216ENST00000547856 G3V318 75 aa10.63□□□□□ -0.71
RAPGEF3-216ENST00000547856 NDUFA12Q9UI09 145 aa10.63□□□□□ -0.71
RAPGEF3-216ENST00000547856 ASH1LQ9NR48 2969 aaKnown RBP10.63□□□□□ -0.71
RAPGEF3-216ENST00000547856 IGHV4OR15-8A0A075B7B6 117 aa10.63□□□□□ -0.71
RAPGEF3-216ENST00000547856 A0A087WW49 117 aa10.63□□□□□ -0.71
RAPGEF3-216ENST00000547856 LY6HO94772 140 aa10.63□□□□□ -0.71
RAPGEF3-216ENST00000547856 TMEM219Q86XT9 240 aa10.63□□□□□ -0.71
RAPGEF3-216ENST00000547856 DSCR8Q96T75 97 aa10.63□□□□□ -0.71
RAPGEF3-216ENST00000547856 ACYP1P07311 99 aa10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 C2orf48Q96LS8 159 aa10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 B9A039 149 aa10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 M0R1W7 72 aa10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 DAZ2Q13117 558 aaKnown RBP10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 DAZ4Q86SG3 579 aaKnown RBP10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 DCANP1Q8TF63 244 aa10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 MRPL53Q96EL3 112 aaKnown RBP10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 DAZ1Q9NQZ3 744 aaKnown RBP10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 DAZ3Q9NR90 486 aaKnown RBP10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 SPTBN4Q9H254 2564 aa10.62□□□□□ -0.71
RAPGEF3-216ENST00000547856 OVOL1O14753 267 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 TRACP01848 142 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 MIAQ16674 131 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 HRCT1Q6UXD1 115 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 LINC00477Q96M19 166 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 PRRC2AP48634 2157 aaKnown RBP10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 A0A0J9YX75 114 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 TRBV27A0A0K0K1C4 114 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 CDSNQ15517 529 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 MED13LQ71F56 2210 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 IGLV4-3A0A075B6K6 122 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 SDIM1Q6ZPB5 146 aa10.61□□□□□ -0.71
RAPGEF3-216ENST00000547856 TRBV7-1A0A0A6YYK4 115 aa10.6□□□□□ -0.71
RAPGEF3-216ENST00000547856 ATP6V0E1O15342 81 aa10.6□□□□□ -0.71
RAPGEF3-216ENST00000547856 NXPH4O95158 308 aa10.6□□□□□ -0.71
RAPGEF3-216ENST00000547856 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
RAPGEF3-216ENST00000547856 CRYGAP11844 174 aa10.6□□□□□ -0.71
RAPGEF3-216ENST00000547856 ITLN2Q8WWU7 325 aaPredicted RBP10.6□□□□□ -0.71
RAPGEF3-216ENST00000547856 OXTP01178 125 aa10.59□□□□□ -0.71
RAPGEF3-216ENST00000547856 CD28P10747 220 aa10.59□□□□□ -0.71
RAPGEF3-216ENST00000547856 RNF152Q8N8N0 203 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms