RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 AP5S1Q9NUS5 200 aa8.45□□□□□ -1.06
CCDC59-202ENST00000547758 IGLV10-54A0A075B6I4 117 aa8.44□□□□□ -1.06
CCDC59-202ENST00000547758 TRAV34A0A0B4J273 112 aa8.44□□□□□ -1.06
CCDC59-202ENST00000547758 CYCSP99999 105 aaKnown RBP8.44□□□□□ -1.06
CCDC59-202ENST00000547758 REG3GQ6UW15 175 aa8.44□□□□□ -1.06
CCDC59-202ENST00000547758 ZFP82Q8N141 532 aa8.44□□□□□ -1.06
CCDC59-202ENST00000547758 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.44□□□□□ -1.06
CCDC59-202ENST00000547758 PPP1R1CQ8WVI7 109 aa8.44□□□□□ -1.06
CCDC59-202ENST00000547758 GTSF1Q8WW33 167 aa8.44□□□□□ -1.06
CCDC59-202ENST00000547758 MUC2Q02817 5179 aa8.43□□□□□ -1.06
CCDC59-202ENST00000547758 FAM240BA0A1B0GVZ2 78 aa8.43□□□□□ -1.06
CCDC59-202ENST00000547758 RPL12P30050 165 aaKnown RBP8.43□□□□□ -1.06
CCDC59-202ENST00000547758 RAB4BP61018 213 aa8.43□□□□□ -1.06
CCDC59-202ENST00000547758 WFDC1Q9HC57 220 aa8.43□□□□□ -1.06
CCDC59-202ENST00000547758 SH2D1AO60880 128 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 CRIP1P50238 77 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 REG3AQ06141 175 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 GAGE6Q13070 117 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 ZNF56Q15929 161 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 TMEM97Q5BJF2 176 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 PRR27Q6MZM9 219 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 SPINK6Q6UWN8 80 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 NTM-AS1Q6ZSK4 140 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 Q86TA4 180 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 RAB24Q969Q5 203 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 TMEM167BQ9NRX6 74 aa8.42□□□□□ -1.06
CCDC59-202ENST00000547758 MPC2O95563 127 aa8.41□□□□□ -1.06
CCDC59-202ENST00000547758 PET100P0DJ07 73 aa8.41□□□□□ -1.06
CCDC59-202ENST00000547758 KRTAP9-3Q9BYQ3 159 aa8.41□□□□□ -1.06
CCDC59-202ENST00000547758 TRBV25-1A0A075B6N4 114 aa8.4□□□□□ -1.06
CCDC59-202ENST00000547758 TMSB15BA0A087X1C1 80 aa8.4□□□□□ -1.06
CCDC59-202ENST00000547758 H2BFSP57053 126 aa8.4□□□□□ -1.06
CCDC59-202ENST00000547758 COX6A2Q02221 97 aa8.4□□□□□ -1.06
CCDC59-202ENST00000547758 MAJINQ3KP22 176 aa8.4□□□□□ -1.06
CCDC59-202ENST00000547758 FAM162BQ5T6X4 162 aa8.4□□□□□ -1.06
CCDC59-202ENST00000547758 DERL1Q9BUN8 251 aa8.4□□□□□ -1.06
CCDC59-202ENST00000547758 VAX2Q9UIW0 290 aa8.4□□□□□ -1.06
CCDC59-202ENST00000547758 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
CCDC59-202ENST00000547758 IGKV2-24A0A0C4DH68 120 aa8.39□□□□□ -1.07
CCDC59-202ENST00000547758 TRBV6-1A0A0K0K1D8 114 aa8.39□□□□□ -1.07
CCDC59-202ENST00000547758 A0A1W2PRE2 83 aa8.39□□□□□ -1.07
CCDC59-202ENST00000547758 CXorf1O96002 111 aa8.39□□□□□ -1.07
CCDC59-202ENST00000547758 P01737 135 aa8.39□□□□□ -1.07
CCDC59-202ENST00000547758 LYPD6BQ8NI32 183 aa8.39□□□□□ -1.07
CCDC59-202ENST00000547758 MUC21A0A0G2JKD1 596 aa8.38□□□□□ -1.07
CCDC59-202ENST00000547758 PEX7O00628 323 aa8.38□□□□□ -1.07
CCDC59-202ENST00000547758 NDUFS6O75380 124 aaKnown RBP8.38□□□□□ -1.07
CCDC59-202ENST00000547758 IFNA7P01567 189 aa8.38□□□□□ -1.07
CCDC59-202ENST00000547758 GZMBP10144 247 aa8.38□□□□□ -1.07
CCDC59-202ENST00000547758 MZT2BQ6NZ67 158 aa8.38□□□□□ -1.07
CCDC59-202ENST00000547758 COX8CQ7Z4L0 72 aa8.38□□□□□ -1.07
CCDC59-202ENST00000547758 STPG4Q8N801 248 aa8.38□□□□□ -1.07
CCDC59-202ENST00000547758 RAB5CP51148 216 aa8.37□□□□□ -1.07
CCDC59-202ENST00000547758 LINC00310P59036 64 aa8.37□□□□□ -1.07
CCDC59-202ENST00000547758 IQCJQ1A5X6 159 aa8.37□□□□□ -1.07
CCDC59-202ENST00000547758 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
CCDC59-202ENST00000547758 PRSS3P2Q8NHM4 247 aa8.37□□□□□ -1.07
CCDC59-202ENST00000547758 CCDC32Q9BV29 185 aa8.37□□□□□ -1.07
CCDC59-202ENST00000547758 IGHV1-24A0A0C4DH33 117 aa8.36□□□□□ -1.07
CCDC59-202ENST00000547758 RPS10P46783 165 aaKnown RBP8.36□□□□□ -1.07
CCDC59-202ENST00000547758 SRSF9Q13242 221 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC59-202ENST00000547758 ZNF674Q2M3X9 581 aa8.36□□□□□ -1.07
CCDC59-202ENST00000547758 C15orf56Q8N910 161 aa8.36□□□□□ -1.07
CCDC59-202ENST00000547758 ZFP30Q9Y2G7 519 aa8.36□□□□□ -1.07
CCDC59-202ENST00000547758 F5H697 171 aa8.35□□□□□ -1.07
CCDC59-202ENST00000547758 MBP02144 154 aa8.35□□□□□ -1.07
CCDC59-202ENST00000547758 OR10AG1Q8NH19 301 aa8.35□□□□□ -1.07
CCDC59-202ENST00000547758 HIST1H2BAQ96A08 127 aa8.35□□□□□ -1.07
CCDC59-202ENST00000547758 PSMG3Q9BT73 122 aaPredicted RBP8.35□□□□□ -1.07
CCDC59-202ENST00000547758 ACTR3CQ9C0K3 210 aaPredicted RBP8.35□□□□□ -1.07
CCDC59-202ENST00000547758 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
CCDC59-202ENST00000547758 IGLV4-60A0A075B6I1 120 aa8.34□□□□□ -1.07
CCDC59-202ENST00000547758 ATP6V0CP27449 155 aa8.34□□□□□ -1.07
CCDC59-202ENST00000547758 UBE2G2P60604 165 aa8.34□□□□□ -1.07
CCDC59-202ENST00000547758 ENKURQ8TC29 256 aa8.34□□□□□ -1.07
CCDC59-202ENST00000547758 ZNF471Q9BX82 626 aaPredicted RBP8.34□□□□□ -1.07
CCDC59-202ENST00000547758 A0A096LNI7 61 aa8.33□□□□□ -1.08
CCDC59-202ENST00000547758 A0A1B0GUV1 79 aa8.33□□□□□ -1.08
CCDC59-202ENST00000547758 SERF2P84101 59 aa8.33□□□□□ -1.08
CCDC59-202ENST00000547758 CFAP161Q6P656 301 aa8.33□□□□□ -1.08
CCDC59-202ENST00000547758 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
CCDC59-202ENST00000547758 FAT4Q6V0I7 4981 aa8.33□□□□□ -1.08
CCDC59-202ENST00000547758 FAM74A7A6NL05 159 aa8.32□□□□□ -1.08
CCDC59-202ENST00000547758 UBE2G1P62253 170 aa8.32□□□□□ -1.08
CCDC59-202ENST00000547758 HIGD2BQ4VC39 106 aa8.32□□□□□ -1.08
CCDC59-202ENST00000547758 Q6ZRP5 223 aa8.32□□□□□ -1.08
CCDC59-202ENST00000547758 AQP10Q96PS8 301 aa8.32□□□□□ -1.08
CCDC59-202ENST00000547758 NKX6-2Q9C056 277 aaPredicted RBP8.32□□□□□ -1.08
CCDC59-202ENST00000547758 TNFSF18Q9UNG2 199 aa8.32□□□□□ -1.08
CCDC59-202ENST00000547758 H7C1H1 209 aa8.31□□□□□ -1.08
CCDC59-202ENST00000547758 LTAP01374 205 aa8.31□□□□□ -1.08
CCDC59-202ENST00000547758 SPANXN1Q5VSR9 72 aa8.31□□□□□ -1.08
CCDC59-202ENST00000547758 TMEM243Q9BU79 118 aa8.31□□□□□ -1.08
CCDC59-202ENST00000547758 A0A0U1RQV1 116 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 MUC21A0A140T8X8 626 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 GAGE12HA6NDE8 117 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 INMT-MINDY4F8WBC2 141 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 SNAI2O43623 268 aa8.3□□□□□ -1.08
CCDC59-202ENST00000547758 SSNA1O43805 119 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms