RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 S100A9P06702 114 aaKnown RBP12.95□□□□□ -0.34
SCN8A-204ENST00000546961 GAGE6Q13070 117 aa12.95□□□□□ -0.34
SCN8A-204ENST00000546961 CLPSL2Q6UWE3 100 aa12.95□□□□□ -0.34
SCN8A-204ENST00000546961 NTM-AS1Q6ZSK4 140 aa12.95□□□□□ -0.34
SCN8A-204ENST00000546961 SFT2D1Q8WV19 159 aa12.95□□□□□ -0.34
SCN8A-204ENST00000546961 SSBP4Q9BWG4 385 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-204ENST00000546961 PLA2G2DQ9UNK4 145 aa12.95□□□□□ -0.34
SCN8A-204ENST00000546961 A0A1B0GV50 99 aa12.94□□□□□ -0.34
SCN8A-204ENST00000546961 RBX1P62877 108 aa12.94□□□□□ -0.34
SCN8A-204ENST00000546961 TMEM97Q5BJF2 176 aa12.94□□□□□ -0.34
SCN8A-204ENST00000546961 LINC00269Q8N2A0 174 aa12.94□□□□□ -0.34
SCN8A-204ENST00000546961 C9orf163Q8N9P6 203 aa12.94□□□□□ -0.34
SCN8A-204ENST00000546961 DAZAP1Q96EP5 407 aaKnown RBP12.94□□□□□ -0.34
SCN8A-204ENST00000546961 DERL1Q9BUN8 251 aa12.94□□□□□ -0.34
SCN8A-204ENST00000546961 G3V3Q6 166 aa12.93□□□□□ -0.34
SCN8A-204ENST00000546961 SNAI2O43623 268 aa12.93□□□□□ -0.34
SCN8A-204ENST00000546961 CXCL1P09341 107 aa12.93□□□□□ -0.34
SCN8A-204ENST00000546961 HNRNPA3P51991 378 aaKnown RBP12.93□□□□□ -0.34
SCN8A-204ENST00000546961 SCO2A0A1W2PP80 73 aa12.92□□□□□ -0.34
SCN8A-204ENST00000546961 OR5AL1P0C617 328 aa12.92□□□□□ -0.34
SCN8A-204ENST00000546961 SMIM17P0DL12 118 aa12.92□□□□□ -0.34
SCN8A-204ENST00000546961 MLST8Q9BVC4 326 aa12.92□□□□□ -0.34
SCN8A-204ENST00000546961 PRR34Q9NV39 138 aa12.92□□□□□ -0.34
SCN8A-204ENST00000546961 VAX2Q9UIW0 290 aa12.92□□□□□ -0.34
SCN8A-204ENST00000546961 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.92□□□□□ -0.34
SCN8A-204ENST00000546961 KRTAP26-1Q6PEX3 210 aa12.91□□□□□ -0.34
SCN8A-204ENST00000546961 FAM213BQ8TBF2 198 aa12.91□□□□□ -0.34
SCN8A-204ENST00000546961 MBD3L1Q8WWY6 194 aa12.91□□□□□ -0.34
SCN8A-204ENST00000546961 TRBV25-1A0A075B6N4 114 aa12.9□□□□□ -0.34
SCN8A-204ENST00000546961 PFDN1O60925 122 aa12.9□□□□□ -0.34
SCN8A-204ENST00000546961 SDIM1Q6ZPB5 146 aa12.9□□□□□ -0.34
SCN8A-204ENST00000546961 TMUB2Q71RG4 321 aa12.9□□□□□ -0.34
SCN8A-204ENST00000546961 BATF3Q9NR55 127 aa12.9□□□□□ -0.34
SCN8A-204ENST00000546961 KIF25-AS1Q9Y6Z4 181 aa12.9□□□□□ -0.34
SCN8A-204ENST00000546961 PANO1I0J062 215 aa12.89□□□□□ -0.35
SCN8A-204ENST00000546961 DPH3Q96FX2 82 aa12.89□□□□□ -0.35
SCN8A-204ENST00000546961 UBR4Q5T4S7 5183 aa12.89□□□□□ -0.35
SCN8A-204ENST00000546961 PKHD1L1Q86WI1 4243 aa12.88□□□□□ -0.35
SCN8A-204ENST00000546961 IGLV10-54A0A075B6I4 117 aa12.88□□□□□ -0.35
SCN8A-204ENST00000546961 SMLR1H3BR10 107 aa12.88□□□□□ -0.35
SCN8A-204ENST00000546961 CLRN3Q8NCR9 226 aa12.88□□□□□ -0.35
SCN8A-204ENST00000546961 IGHV1-24A0A0C4DH33 117 aa12.87□□□□□ -0.35
SCN8A-204ENST00000546961 AP1S3Q96PC3 154 aa12.87□□□□□ -0.35
SCN8A-204ENST00000546961 MGPP08493 103 aa12.86□□□□□ -0.35
SCN8A-204ENST00000546961 REG3AQ06141 175 aa12.86□□□□□ -0.35
SCN8A-204ENST00000546961 IQCJQ1A5X6 159 aa12.86□□□□□ -0.35
SCN8A-204ENST00000546961 KCNRGQ8N5I3 272 aa12.86□□□□□ -0.35
SCN8A-204ENST00000546961 TPPP3Q9BW30 176 aa12.86□□□□□ -0.35
SCN8A-204ENST00000546961 hDV102S1A0JD36 115 aa12.85□□□□□ -0.35
SCN8A-204ENST00000546961 UMAD1C9J7I0 102 aa12.85□□□□□ -0.35
SCN8A-204ENST00000546961 M0QY20 66 aa12.85□□□□□ -0.35
SCN8A-204ENST00000546961 GZMBP10144 247 aa12.85□□□□□ -0.35
SCN8A-204ENST00000546961 A0A0D9SG52 128 aa12.84□□□□□ -0.35
SCN8A-204ENST00000546961 H2AFB1P0C5Y9 115 aa12.84□□□□□ -0.35
SCN8A-204ENST00000546961 RPL35P42766 123 aaKnown RBP12.84□□□□□ -0.35
SCN8A-204ENST00000546961 RAB5CP51148 216 aa12.84□□□□□ -0.35
SCN8A-204ENST00000546961 SUMO4Q6EEV6 95 aa12.83□□□□□ -0.36
SCN8A-204ENST00000546961 H7C1H1 209 aa12.82□□□□□ -0.36
SCN8A-204ENST00000546961 NKX2-5P52952 324 aaPredicted RBP12.82□□□□□ -0.36
SCN8A-204ENST00000546961 FER1L6-AS1Q8NA97 138 aa12.82□□□□□ -0.36
SCN8A-204ENST00000546961 C20orf203Q8NBC4 194 aa12.82□□□□□ -0.36
SCN8A-204ENST00000546961 AP5S1Q9NUS5 200 aa12.82□□□□□ -0.36
SCN8A-204ENST00000546961 TRAV8-4A0A0B4J246 113 aa12.81□□□□□ -0.36
SCN8A-204ENST00000546961 P01737 135 aa12.81□□□□□ -0.36
SCN8A-204ENST00000546961 CNBPP62633 177 aaKnown RBP12.81□□□□□ -0.36
SCN8A-204ENST00000546961 OR2D3Q8NGH3 330 aa12.81□□□□□ -0.36
SCN8A-204ENST00000546961 TMEM243Q9BU79 118 aa12.81□□□□□ -0.36
SCN8A-204ENST00000546961 IGLV4-60A0A075B6I1 120 aa12.8□□□□□ -0.36
SCN8A-204ENST00000546961 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
SCN8A-204ENST00000546961 CCL20P78556 96 aa12.8□□□□□ -0.36
SCN8A-204ENST00000546961 GFRA4Q9GZZ7 299 aa12.8□□□□□ -0.36
SCN8A-204ENST00000546961 A0A1B0GUV1 79 aa12.79□□□□□ -0.36
SCN8A-204ENST00000546961 SLPIP03973 132 aa12.79□□□□□ -0.36
SCN8A-204ENST00000546961 IGLC6P0CF74 106 aa12.79□□□□□ -0.36
SCN8A-204ENST00000546961 MT1HL1P0DM35 61 aa12.79□□□□□ -0.36
SCN8A-204ENST00000546961 RPS20P60866 119 aaKnown RBP12.79□□□□□ -0.36
SCN8A-204ENST00000546961 CACNG7P62955 275 aa12.79□□□□□ -0.36
SCN8A-204ENST00000546961 ZNF345Q14585 488 aa12.79□□□□□ -0.36
SCN8A-204ENST00000546961 Q6ZRU5 148 aa12.79□□□□□ -0.36
SCN8A-204ENST00000546961 GNG13Q9P2W3 67 aa12.79□□□□□ -0.36
SCN8A-204ENST00000546961 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.78□□□□□ -0.36
SCN8A-204ENST00000546961 KANTRA0A1W2PQU2 76 aa12.78□□□□□ -0.36
SCN8A-204ENST00000546961 CHTF8P0CG12 524 aa12.78□□□□□ -0.36
SCN8A-204ENST00000546961 CIRBPQ14011 172 aaKnown RBP12.78□□□□□ -0.36
SCN8A-204ENST00000546961 RGS21Q2M5E4 152 aa12.78□□□□□ -0.36
SCN8A-204ENST00000546961 CENPWQ5EE01 88 aa12.78□□□□□ -0.36
SCN8A-204ENST00000546961 RASL11AQ6T310 242 aa12.78□□□□□ -0.36
SCN8A-204ENST00000546961 A0A087WYN8 130 aa12.77□□□□□ -0.37
SCN8A-204ENST00000546961 RAB19A4D1S5 217 aa12.77□□□□□ -0.37
SCN8A-204ENST00000546961 UBE2L6O14933 153 aa12.76□□□□□ -0.37
SCN8A-204ENST00000546961 BCL2L11O43521 198 aa12.76□□□□□ -0.37
SCN8A-204ENST00000546961 C11orf52Q96A22 123 aa12.76□□□□□ -0.37
SCN8A-204ENST00000546961 NIT2Q9NQR4 276 aa12.76□□□□□ -0.37
SCN8A-204ENST00000546961 HMSDA8MTL9 139 aa12.75□□□□□ -0.37
SCN8A-204ENST00000546961 F2Z2F3 143 aa12.75□□□□□ -0.37
SCN8A-204ENST00000546961 SULT1A2P50226 295 aa12.75□□□□□ -0.37
SCN8A-204ENST00000546961 EIF5AP63241 154 aaKnown RBP12.75□□□□□ -0.37
SCN8A-204ENST00000546961 LYZL1Q6UWQ5 148 aa12.75□□□□□ -0.37
SCN8A-204ENST00000546961 RNF185Q96GF1 192 aa12.75□□□□□ -0.37
SCN8A-204ENST00000546961 MANBALQ9NQG1 85 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms