RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 AVPP01185 164 aa7.46□□□□□ -1.21
TRAF1-203ENST00000546084 IGLC6P0CF74 106 aa7.46□□□□□ -1.21
TRAF1-203ENST00000546084 LGALS3P17931 250 aaKnown RBP7.46□□□□□ -1.21
TRAF1-203ENST00000546084 Q8N8P6 123 aa7.46□□□□□ -1.21
TRAF1-203ENST00000546084 RNF185Q96GF1 192 aa7.46□□□□□ -1.21
TRAF1-203ENST00000546084 SPANXA1Q9NS26 97 aa7.46□□□□□ -1.21
TRAF1-203ENST00000546084 GCN1Q92616 2671 aaKnown RBP7.46□□□□□ -1.22
TRAF1-203ENST00000546084 MT-ATP8P03928 68 aa7.46□□□□□ -1.22
TRAF1-203ENST00000546084 C9orf139Q6ZV77 190 aa7.46□□□□□ -1.22
TRAF1-203ENST00000546084 CELSR2Q9HCU4 2923 aa7.46□□□□□ -1.22
TRAF1-203ENST00000546084 COL27A1Q8IZC6 1860 aaPredicted RBP7.46□□□□□ -1.22
TRAF1-203ENST00000546084 DUSP14O95147 198 aaKnown RBP7.45□□□□□ -1.22
TRAF1-203ENST00000546084 TSPAN13O95857 204 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 HLA-DRB4P13762 266 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 SLURP1P55000 103 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 C12orf74Q32Q52 190 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 MAPKAPK5-AS1Q8N8E1 139 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 HHLA3Q9XRX5 114 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 HLA-DRB4X5D2U9 266 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 OOSP1A8MZH6 123 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 IGLL5B9A064 214 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 J3KT08 172 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 HOXA3O43365 443 aaPredicted RBP7.45□□□□□ -1.22
TRAF1-203ENST00000546084 P0DMU3 169 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 FAM231AP0DMU4 169 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 FAM231CP0DMU5 169 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 HERVK_113P61574 105 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 CEMP1Q6PRD7 247 aaPredicted RBP7.45□□□□□ -1.22
TRAF1-203ENST00000546084 C20orf78Q9BR46 151 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 DPH3P1Q9H4G8 78 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 TOMM7Q9P0U1 55 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 MDFICQ9P1T7 246 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 ODF3BA8MYP8 253 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 RPL35AP18077 110 aaKnown RBP7.45□□□□□ -1.22
TRAF1-203ENST00000546084 GATD1Q8NB37 220 aa7.45□□□□□ -1.22
TRAF1-203ENST00000546084 BRI3O95415 125 aa7.44□□□□□ -1.22
TRAF1-203ENST00000546084 RPL13AP40429 203 aaKnown RBP7.44□□□□□ -1.22
TRAF1-203ENST00000546084 NSUN5P1Q3KNT7 163 aa7.44□□□□□ -1.22
TRAF1-203ENST00000546084 SPAG8Q99932 426 aaPredicted RBP7.44□□□□□ -1.22
TRAF1-203ENST00000546084 C11orf68Q9H3H3 251 aaKnown RBP7.44□□□□□ -1.22
TRAF1-203ENST00000546084 UBR5O95071 2799 aaPredicted RBP7.44□□□□□ -1.22
TRAF1-203ENST00000546084 CCDC179H3BU77 68 aa7.44□□□□□ -1.22
TRAF1-203ENST00000546084 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
TRAF1-203ENST00000546084 FOXI2Q6ZQN5 318 aa7.43□□□□□ -1.22
TRAF1-203ENST00000546084 SMIM2Q9BVW6 85 aa7.43□□□□□ -1.22
TRAF1-203ENST00000546084 OVOL1O14753 267 aa7.43□□□□□ -1.22
TRAF1-203ENST00000546084 TMEM126AQ9H061 195 aa7.43□□□□□ -1.22
TRAF1-203ENST00000546084 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
TRAF1-203ENST00000546084 F8W1H4 67 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 H7C1H1 209 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 PLNP26678 52 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 C18orf65Q6ZTR6 163 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 TMEM190Q8WZ59 177 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 A0A087WX48 190 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 LINC01549A6NIU2 74 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 CD28P10747 220 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 C11orf71Q6IPW1 123 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 Q96MF0 132 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 ZFAND3Q9H8U3 227 aa7.42□□□□□ -1.22
TRAF1-203ENST00000546084 MGAM2Q2M2H8 2515 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 TRGV1A0A0A0MS02 117 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 TRAV13-1A0A0B4J241 112 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 LINC01559Q495D7 138 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 F8P00451 2351 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 IGHV7-4-1A0A0J9YVY3 117 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 C9JAW5 83 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 F8VRH5 84 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 PROK1P58294 105 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 ORMDL2Q53FV1 153 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 NBEAL1Q6ZS30 2694 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 A0A0U1RQV1 116 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 IGHG4P01861 327 aa7.41□□□□□ -1.22
TRAF1-203ENST00000546084 MYMXA0A1B0GTQ4 84 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 CLPSL1A2RUU4 121 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 HTN3P15516 51 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
TRAF1-203ENST00000546084 INSL3P51460 131 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 CSMD2Q7Z408 3487 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 IGHV4OR15-8A0A075B7B6 117 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 A0A087WW49 117 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 E9PLD3 99 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 RRN3P1Q2M238 152 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 Q8N1Y9 231 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 DAND5Q8N907 189 aa7.4□□□□□ -1.22
TRAF1-203ENST00000546084 FAM223BA6NKX1 122 aa7.4□□□□□ -1.23
TRAF1-203ENST00000546084 FBXL19-AS1Q494R0 122 aa7.4□□□□□ -1.23
TRAF1-203ENST00000546084 GAGE2AQ6NT46 116 aa7.4□□□□□ -1.23
TRAF1-203ENST00000546084 FAM223AQ8IWN6 122 aa7.4□□□□□ -1.23
TRAF1-203ENST00000546084 TRGV2A0A075B6R0 118 aa7.39□□□□□ -1.23
TRAF1-203ENST00000546084 A0A096LPF7 62 aa7.39□□□□□ -1.23
TRAF1-203ENST00000546084 NDUFA4O00483 81 aa7.39□□□□□ -1.23
TRAF1-203ENST00000546084 Q6ZUT4 128 aa7.39□□□□□ -1.23
TRAF1-203ENST00000546084 C10orf105Q8TEF2 133 aa7.39□□□□□ -1.23
TRAF1-203ENST00000546084 SPANXB1Q9NS25 103 aaPredicted RBP7.39□□□□□ -1.23
TRAF1-203ENST00000546084 MAST4O15021 2626 aa7.39□□□□□ -1.23
TRAF1-203ENST00000546084 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.39□□□□□ -1.23
TRAF1-203ENST00000546084 IGKV2-29A2NJV5 120 aaPredicted RBP7.39□□□□□ -1.23
TRAF1-203ENST00000546084 KRTAP10-9P60411 292 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms