RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 CAMPP49913 170 aa8.14□□□□□ -1.11
SNHG1-221ENST00000544983 SUMO4Q6EEV6 95 aa8.14□□□□□ -1.11
SNHG1-221ENST00000544983 MRPL54Q6P161 138 aaKnown RBP8.14□□□□□ -1.11
SNHG1-221ENST00000544983 UBE2DNLQ8IWF7 75 aa8.14□□□□□ -1.11
SNHG1-221ENST00000544983 NIT2Q9NQR4 276 aa8.14□□□□□ -1.11
SNHG1-221ENST00000544983 TNFRSF18Q9Y5U5 241 aa8.14□□□□□ -1.11
SNHG1-221ENST00000544983 LOC100131303A0A0U1RQF7 123 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 GAGE12JA6NER3 117 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 RAB4AP20338 218 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 GAGE1Q13065 139 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 GAGE4Q13068 117 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 GAGE5Q13069 117 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 COX19Q49B96 90 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 GAGE13Q4V321 117 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 TMEM97Q5BJF2 176 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 FAM104BQ5XKR9 115 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 LYPD5Q6UWN5 251 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 DAZ4Q86SG3 579 aaKnown RBP8.13□□□□□ -1.11
SNHG1-221ENST00000544983 NEXN-AS1Q8NBZ9 246 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 ZNRF2Q8NHG8 242 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 UPK3BQ9BT76 320 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 GTSF1LQ9H1H1 148 aa8.13□□□□□ -1.11
SNHG1-221ENST00000544983 DAZ3Q9NR90 486 aaKnown RBP8.13□□□□□ -1.11
SNHG1-221ENST00000544983 MRPS16Q9Y3D3 137 aaKnown RBP8.13□□□□□ -1.11
SNHG1-221ENST00000544983 LY6G6CO95867 125 aa8.12□□□□□ -1.11
SNHG1-221ENST00000544983 PPBPP02775 128 aa8.12□□□□□ -1.11
SNHG1-221ENST00000544983 UBE2D3P61077 147 aa8.12□□□□□ -1.11
SNHG1-221ENST00000544983 UBE2D2P62837 147 aa8.12□□□□□ -1.11
SNHG1-221ENST00000544983 ESRGQ1W209 222 aa8.12□□□□□ -1.11
SNHG1-221ENST00000544983 TRBV6-5A0A0K0K1A5 114 aa8.11□□□□□ -1.11
SNHG1-221ENST00000544983 AMN1Q8IY45 258 aa8.11□□□□□ -1.11
SNHG1-221ENST00000544983 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
SNHG1-221ENST00000544983 LINC00588Q9Y4M8 146 aa8.11□□□□□ -1.11
SNHG1-221ENST00000544983 K7EP13 123 aa8.1□□□□□ -1.11
SNHG1-221ENST00000544983 LELP1Q5T871 98 aa8.1□□□□□ -1.11
SNHG1-221ENST00000544983 Q9UF83 564 aa8.1□□□□□ -1.11
SNHG1-221ENST00000544983 URGCP-MRPS24S4R325 110 aa8.1□□□□□ -1.11
SNHG1-221ENST00000544983 TRAV8-6A0A0B4J262 113 aa8.09□□□□□ -1.11
SNHG1-221ENST00000544983 TRAV26-2A0A0B4J265 109 aa8.09□□□□□ -1.11
SNHG1-221ENST00000544983 PHOX2AO14813 284 aa8.09□□□□□ -1.11
SNHG1-221ENST00000544983 HLA-DQA1P01909 254 aa8.09□□□□□ -1.11
SNHG1-221ENST00000544983 MT-ND6P03923 174 aa8.09□□□□□ -1.11
SNHG1-221ENST00000544983 CKS2P33552 79 aa8.09□□□□□ -1.11
SNHG1-221ENST00000544983 MRPL51Q4U2R6 128 aaKnown RBP8.09□□□□□ -1.11
SNHG1-221ENST00000544983 GNB1LQ9BYB4 327 aa8.09□□□□□ -1.11
SNHG1-221ENST00000544983 SMCO4Q9NRQ5 59 aa8.09□□□□□ -1.11
SNHG1-221ENST00000544983 TRBV24-1A0A075B6N3 115 aa8.08□□□□□ -1.12
SNHG1-221ENST00000544983 PKIAP61925 76 aa8.08□□□□□ -1.12
SNHG1-221ENST00000544983 OR10J3Q5JRS4 329 aa8.08□□□□□ -1.12
SNHG1-221ENST00000544983 ORMDL3Q8N138 153 aa8.08□□□□□ -1.12
SNHG1-221ENST00000544983 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
SNHG1-221ENST00000544983 PLECQ15149 4684 aaKnown RBP8.08□□□□□ -1.12
SNHG1-221ENST00000544983 TRBV6-8A0A0A6YYG3 113 aa8.07□□□□□ -1.12
SNHG1-221ENST00000544983 SIVA1O15304 175 aa8.07□□□□□ -1.12
SNHG1-221ENST00000544983 RPL32P62910 135 aaKnown RBP8.07□□□□□ -1.12
SNHG1-221ENST00000544983 ELOBQ15370 118 aa8.07□□□□□ -1.12
SNHG1-221ENST00000544983 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
SNHG1-221ENST00000544983 Q9H8V8 135 aa8.07□□□□□ -1.12
SNHG1-221ENST00000544983 ST20Q9HBF5 79 aa8.07□□□□□ -1.12
SNHG1-221ENST00000544983 TRAV9-2A0A087WT02 112 aa8.06□□□□□ -1.12
SNHG1-221ENST00000544983 SDHAF1A6NFY7 115 aa8.06□□□□□ -1.12
SNHG1-221ENST00000544983 TCAPO15273 167 aa8.06□□□□□ -1.12
SNHG1-221ENST00000544983 NCR2O95944 276 aa8.06□□□□□ -1.12
SNHG1-221ENST00000544983 BTF3P20290 206 aaKnown RBP8.06□□□□□ -1.12
SNHG1-221ENST00000544983 COTL1Q14019 142 aa8.06□□□□□ -1.12
SNHG1-221ENST00000544983 TTC32Q5I0X7 151 aa8.06□□□□□ -1.12
SNHG1-221ENST00000544983 TMEM136Q6ZRR5 245 aa8.06□□□□□ -1.12
SNHG1-221ENST00000544983 RPL39LQ96EH5 51 aaKnown RBP8.06□□□□□ -1.12
SNHG1-221ENST00000544983 LYSTQ99698 3801 aa8.06□□□□□ -1.12
SNHG1-221ENST00000544983 TRBV25-1A0A075B6N4 114 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 IGHV3-38A0A0C4DH36 116 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 TRBV27A0A0K0K1C4 114 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 D6R8Y8 96 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 I3L3M4 83 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 VCYO14598 125 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 DNAH10OSP0CZ25 163 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 POLR2KP53803 58 aaKnown RBP8.05□□□□□ -1.12
SNHG1-221ENST00000544983 SUMO2P61956 95 aaKnown RBP8.05□□□□□ -1.12
SNHG1-221ENST00000544983 IQCJQ1A5X6 159 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 ATRAIDQ6UW56 229 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 NRACQ8N912 160 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 TMEM70Q9BUB7 260 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 CHCHD7Q9BUK0 85 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 RYR2Q92736 4967 aa8.05□□□□□ -1.12
SNHG1-221ENST00000544983 IGHV1-24A0A0C4DH33 117 aa8.04□□□□□ -1.12
SNHG1-221ENST00000544983 TNFRSF6BO95407 300 aa8.04□□□□□ -1.12
SNHG1-221ENST00000544983 APCSP02743 223 aa8.04□□□□□ -1.12
SNHG1-221ENST00000544983 PMCHP20382 165 aa8.04□□□□□ -1.12
SNHG1-221ENST00000544983 S100A1P23297 94 aa8.04□□□□□ -1.12
SNHG1-221ENST00000544983 LINC01556Q5JQF7 62 aa8.04□□□□□ -1.12
SNHG1-221ENST00000544983 C10orf126Q8N4M7 172 aa8.04□□□□□ -1.12
SNHG1-221ENST00000544983 PRELID3AQ96N28 172 aa8.04□□□□□ -1.12
SNHG1-221ENST00000544983 KIR2DL4Q99706 377 aa8.04□□□□□ -1.12
SNHG1-221ENST00000544983 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
SNHG1-221ENST00000544983 SMKR1H3BMG3 65 aa8.03□□□□□ -1.12
SNHG1-221ENST00000544983 RPS10P46783 165 aaKnown RBP8.03□□□□□ -1.12
SNHG1-221ENST00000544983 YPEL4Q96NS1 127 aa8.03□□□□□ -1.12
SNHG1-221ENST00000544983 HYDINQ4G0P3 5121 aa8.02□□□□□ -1.13
SNHG1-221ENST00000544983 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
SNHG1-221ENST00000544983 NBDYA0A0U1RRE5 68 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms