RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 NTF3P20783 257 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 FOXA3P55318 350 aaPredicted RBP7.64□□□□□ -1.19
YBX3-216ENST00000544622 ZNF56Q15929 161 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 NIT1Q86X76 327 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 GTSF1Q8WW33 167 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 TPPP3Q9BW30 176 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 EIF5A2Q9GZV4 153 aaKnown RBP7.64□□□□□ -1.19
YBX3-216ENST00000544622 DNAH8Q96JB1 4490 aa7.64□□□□□ -1.19
YBX3-216ENST00000544622 FAT1Q14517 4588 aa7.63□□□□□ -1.19
YBX3-216ENST00000544622 TRBV6-8A0A0A6YYG3 113 aa7.63□□□□□ -1.19
YBX3-216ENST00000544622 DAZ4Q86SG3 579 aaKnown RBP7.63□□□□□ -1.19
YBX3-216ENST00000544622 LINC01551Q86U37 167 aa7.63□□□□□ -1.19
YBX3-216ENST00000544622 DAZ3Q9NR90 486 aaKnown RBP7.63□□□□□ -1.19
YBX3-216ENST00000544622 PGPEP1Q9NXJ5 209 aa7.63□□□□□ -1.19
YBX3-216ENST00000544622 F5H697 171 aa7.62□□□□□ -1.19
YBX3-216ENST00000544622 CDK2AP2O75956 126 aa7.62□□□□□ -1.19
YBX3-216ENST00000544622 SMIM17P0DL12 118 aa7.62□□□□□ -1.19
YBX3-216ENST00000544622 ERVFC1-1P60608 527 aa7.62□□□□□ -1.19
YBX3-216ENST00000544622 NTM-AS1Q6ZSK4 140 aa7.62□□□□□ -1.19
YBX3-216ENST00000544622 CHCHD7Q9BUK0 85 aa7.62□□□□□ -1.19
YBX3-216ENST00000544622 KRTAP17-1Q9BYP8 105 aa7.62□□□□□ -1.19
YBX3-216ENST00000544622 C9JQL5 133 aa7.61□□□□□ -1.19
YBX3-216ENST00000544622 CT83Q5H943 113 aa7.61□□□□□ -1.19
YBX3-216ENST00000544622 SUMO4Q6EEV6 95 aa7.61□□□□□ -1.19
YBX3-216ENST00000544622 DNAJC30Q96LL9 226 aa7.61□□□□□ -1.19
YBX3-216ENST00000544622 ZNF727A8MUV8 499 aa7.6□□□□□ -1.19
YBX3-216ENST00000544622 GATCO43716 136 aaKnown RBP7.6□□□□□ -1.19
YBX3-216ENST00000544622 TRGC1P0CF51 173 aa7.6□□□□□ -1.19
YBX3-216ENST00000544622 CDPF1Q6NVV7 123 aa7.6□□□□□ -1.19
YBX3-216ENST00000544622 SMIM7Q9BQ49 75 aa7.6□□□□□ -1.19
YBX3-216ENST00000544622 DPH3P1Q9H4G8 78 aa7.6□□□□□ -1.19
YBX3-216ENST00000544622 SMDT1Q9H4I9 107 aa7.6□□□□□ -1.19
YBX3-216ENST00000544622 TRAV8-3A0A0A6YYJ7 113 aa7.59□□□□□ -1.19
YBX3-216ENST00000544622 A8MWL6 223 aa7.59□□□□□ -1.19
YBX3-216ENST00000544622 H7C1H1 209 aa7.59□□□□□ -1.19
YBX3-216ENST00000544622 EREGO14944 169 aa7.59□□□□□ -1.19
YBX3-216ENST00000544622 CEBPGP53567 150 aa7.59□□□□□ -1.19
YBX3-216ENST00000544622 SRSF3P84103 164 aaKnown RBP7.59□□□□□ -1.19
YBX3-216ENST00000544622 TWIST1Q15672 202 aa7.59□□□□□ -1.19
YBX3-216ENST00000544622 MAPKAPK5-AS1Q8N8E1 139 aa7.59□□□□□ -1.19
YBX3-216ENST00000544622 Q9HAA7 133 aa7.59□□□□□ -1.19
YBX3-216ENST00000544622 OSTCQ9NRP0 149 aa7.59□□□□□ -1.19
YBX3-216ENST00000544622 FAM231BA6NCW3 169 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 MGPP08493 103 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 FUSP35637 526 aaKnown RBP eCLIP7.58□□□□□ -1.2
YBX3-216ENST00000544622 IQCJQ1A5X6 159 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 FAM74A3Q4VXF1 159 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 TMEM97Q5BJF2 176 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 RASL11AQ6T310 242 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 ATRAIDQ6UW56 229 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 TSKUQ8WUA8 353 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 FRZBQ92765 325 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 GFRA4Q9GZZ7 299 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 NIT2Q9NQR4 276 aa7.58□□□□□ -1.2
YBX3-216ENST00000544622 A0A087WX48 190 aa7.57□□□□□ -1.2
YBX3-216ENST00000544622 PSCAO43653 123 aa7.57□□□□□ -1.2
YBX3-216ENST00000544622 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
YBX3-216ENST00000544622 Q8N814 137 aa7.57□□□□□ -1.2
YBX3-216ENST00000544622 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.57□□□□□ -1.2
YBX3-216ENST00000544622 GATD1Q8NB37 220 aa7.57□□□□□ -1.2
YBX3-216ENST00000544622 TM2D2Q9BX73 214 aa7.57□□□□□ -1.2
YBX3-216ENST00000544622 KLK12Q9UKR0 248 aa7.57□□□□□ -1.2
YBX3-216ENST00000544622 URGCP-MRPS24S4R325 110 aa7.57□□□□□ -1.2
YBX3-216ENST00000544622 V9GYV3 84 aa7.57□□□□□ -1.2
YBX3-216ENST00000544622 RPL23P62829 140 aaKnown RBP7.56□□□□□ -1.2
YBX3-216ENST00000544622 WFDC2Q14508 124 aa7.56□□□□□ -1.2
YBX3-216ENST00000544622 PEA15Q15121 130 aa7.56□□□□□ -1.2
YBX3-216ENST00000544622 ELOBQ15370 118 aa7.56□□□□□ -1.2
YBX3-216ENST00000544622 TMEM241Q24JQ0 296 aa7.56□□□□□ -1.2
YBX3-216ENST00000544622 ENHOQ6UWT2 76 aa7.56□□□□□ -1.2
YBX3-216ENST00000544622 ISOC2Q96AB3 205 aa7.56□□□□□ -1.2
YBX3-216ENST00000544622 PGLYRP4Q96LB8 373 aa7.56□□□□□ -1.2
YBX3-216ENST00000544622 COX11Q9Y6N1 276 aa7.56□□□□□ -1.2
YBX3-216ENST00000544622 TRBV25-1A0A075B6N4 114 aa7.55□□□□□ -1.2
YBX3-216ENST00000544622 HIGD1CA8MV81 97 aa7.55□□□□□ -1.2
YBX3-216ENST00000544622 TMEM262E9PQX1 116 aa7.55□□□□□ -1.2
YBX3-216ENST00000544622 KRTAP10-1P60331 282 aa7.55□□□□□ -1.2
YBX3-216ENST00000544622 Q8N976 141 aa7.55□□□□□ -1.2
YBX3-216ENST00000544622 NTN5Q8WTR8 489 aaPredicted RBP7.55□□□□□ -1.2
YBX3-216ENST00000544622 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
YBX3-216ENST00000544622 PRR34Q9NV39 138 aa7.55□□□□□ -1.2
YBX3-216ENST00000544622 TRAV26-2A0A0B4J265 109 aa7.54□□□□□ -1.2
YBX3-216ENST00000544622 PKIAP61925 76 aa7.54□□□□□ -1.2
YBX3-216ENST00000544622 Q0VG73 95 aa7.54□□□□□ -1.2
YBX3-216ENST00000544622 UBE2WQ96B02 151 aa7.54□□□□□ -1.2
YBX3-216ENST00000544622 CHCHD5Q9BSY4 110 aa7.54□□□□□ -1.2
YBX3-216ENST00000544622 NAT8Q9UHE5 227 aa7.54□□□□□ -1.2
YBX3-216ENST00000544622 IGHV1-24A0A0C4DH33 117 aa7.53□□□□□ -1.2
YBX3-216ENST00000544622 A0A1B0GUT8 65 aa7.53□□□□□ -1.2
YBX3-216ENST00000544622 A0A1B0GUV1 79 aa7.53□□□□□ -1.2
YBX3-216ENST00000544622 XGP55808 180 aa7.53□□□□□ -1.2
YBX3-216ENST00000544622 RBX1P62877 108 aa7.53□□□□□ -1.2
YBX3-216ENST00000544622 KCNIP4Q6PIL6 250 aa7.53□□□□□ -1.2
YBX3-216ENST00000544622 C15orf54Q8N8G6 183 aa7.53□□□□□ -1.2
YBX3-216ENST00000544622 NUP35Q8NFH5 326 aa7.53□□□□□ -1.2
YBX3-216ENST00000544622 TMEM191AQ9H0A3 160 aa7.53□□□□□ -1.2
YBX3-216ENST00000544622 TRBV6-5A0A0K0K1A5 114 aa7.52□□□□□ -1.21
YBX3-216ENST00000544622 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
YBX3-216ENST00000544622 GCSHP23434 173 aa7.52□□□□□ -1.21
YBX3-216ENST00000544622 KRTAP26-1Q6PEX3 210 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms