RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 PFDN1O60925 122 aa12.1□□□□□ -0.47
LTBR-211ENST00000543190 OXTP01178 125 aa12.1□□□□□ -0.47
LTBR-211ENST00000543190 RPL19P84098 196 aaKnown RBP12.1□□□□□ -0.47
LTBR-211ENST00000543190 ZNF56Q15929 161 aa12.1□□□□□ -0.47
LTBR-211ENST00000543190 NTM-AS1Q6ZSK4 140 aa12.1□□□□□ -0.47
LTBR-211ENST00000543190 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
LTBR-211ENST00000543190 C11orf52Q96A22 123 aa12.1□□□□□ -0.47
LTBR-211ENST00000543190 CRPP02741 224 aa12.09□□□□□ -0.47
LTBR-211ENST00000543190 KRTAP26-1Q6PEX3 210 aa12.09□□□□□ -0.47
LTBR-211ENST00000543190 FAM213BQ8TBF2 198 aa12.09□□□□□ -0.47
LTBR-211ENST00000543190 SMIM12Q96EX1 92 aa12.09□□□□□ -0.47
LTBR-211ENST00000543190 LRP1Q07954 4544 aaKnown RBP12.09□□□□□ -0.47
LTBR-211ENST00000543190 TMEM262E9PQX1 116 aa12.08□□□□□ -0.48
LTBR-211ENST00000543190 H2AFB1P0C5Y9 115 aa12.08□□□□□ -0.48
LTBR-211ENST00000543190 EIF5AP63241 154 aaKnown RBP12.08□□□□□ -0.48
LTBR-211ENST00000543190 IQCJQ1A5X6 159 aa12.08□□□□□ -0.48
LTBR-211ENST00000543190 SPANXN1Q5VSR9 72 aa12.08□□□□□ -0.48
LTBR-211ENST00000543190 C15orf54Q8N8G6 183 aa12.08□□□□□ -0.48
LTBR-211ENST00000543190 AP1S3Q96PC3 154 aa12.08□□□□□ -0.48
LTBR-211ENST00000543190 ANGP03950 147 aaKnown RBP12.07□□□□□ -0.48
LTBR-211ENST00000543190 IGLC6P0CF74 106 aa12.07□□□□□ -0.48
LTBR-211ENST00000543190 C9orf163Q8N9P6 203 aa12.07□□□□□ -0.48
LTBR-211ENST00000543190 MANBALQ9NQG1 85 aa12.07□□□□□ -0.48
LTBR-211ENST00000543190 USP17L23D6RBM5 183 aa12.06□□□□□ -0.48
LTBR-211ENST00000543190 BCL2L11O43521 198 aa12.06□□□□□ -0.48
LTBR-211ENST00000543190 RPL35P42766 123 aaKnown RBP12.06□□□□□ -0.48
LTBR-211ENST00000543190 CHCHD5Q9BSY4 110 aa12.06□□□□□ -0.48
LTBR-211ENST00000543190 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
LTBR-211ENST00000543190 M0QY20 66 aa12.05□□□□□ -0.48
LTBR-211ENST00000543190 RBX1P62877 108 aa12.05□□□□□ -0.48
LTBR-211ENST00000543190 SERTAD4-AS1Q5TG53 156 aa12.05□□□□□ -0.48
LTBR-211ENST00000543190 CLRN3Q8NCR9 226 aa12.05□□□□□ -0.48
LTBR-211ENST00000543190 A0A1B0GUV1 79 aa12.04□□□□□ -0.48
LTBR-211ENST00000543190 H7C1H1 209 aa12.04□□□□□ -0.48
LTBR-211ENST00000543190 PRSS1P07477 247 aa12.04□□□□□ -0.48
LTBR-211ENST00000543190 SMIM17P0DL12 118 aa12.04□□□□□ -0.48
LTBR-211ENST00000543190 KANTRA0A1W2PQU2 76 aa12.03□□□□□ -0.48
LTBR-211ENST00000543190 C19orf71A6NCJ1 209 aa12.03□□□□□ -0.48
LTBR-211ENST00000543190 F5H697 171 aa12.03□□□□□ -0.48
LTBR-211ENST00000543190 SMLR1H3BR10 107 aa12.03□□□□□ -0.48
LTBR-211ENST00000543190 RAB5CP51148 216 aa12.03□□□□□ -0.48
LTBR-211ENST00000543190 RPS20P60866 119 aaKnown RBP12.03□□□□□ -0.48
LTBR-211ENST00000543190 DERL1Q9BUN8 251 aa12.03□□□□□ -0.48
LTBR-211ENST00000543190 TRAV8-4A0A0B4J246 113 aa12.02□□□□□ -0.49
LTBR-211ENST00000543190 F2Z2F3 143 aa12.02□□□□□ -0.49
LTBR-211ENST00000543190 P01737 135 aa12.02□□□□□ -0.49
LTBR-211ENST00000543190 CNBPP62633 177 aaKnown RBP12.02□□□□□ -0.49
LTBR-211ENST00000543190 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.49
LTBR-211ENST00000543190 PGLYRP4Q96LB8 373 aa12.02□□□□□ -0.49
LTBR-211ENST00000543190 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
LTBR-211ENST00000543190 CACNG7P62955 275 aa12.01□□□□□ -0.49
LTBR-211ENST00000543190 PKHD1L1Q86WI1 4243 aa12□□□□□ -0.49
LTBR-211ENST00000543190 HLA-DQA1P01909 254 aa12□□□□□ -0.49
LTBR-211ENST00000543190 GZMBP10144 247 aa12□□□□□ -0.49
LTBR-211ENST00000543190 CCL20P78556 96 aa12□□□□□ -0.49
LTBR-211ENST00000543190 WDR73Q6P4I2 378 aa12□□□□□ -0.49
LTBR-211ENST00000543190 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
LTBR-211ENST00000543190 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
LTBR-211ENST00000543190 FER1L6-AS1Q8NA97 138 aa12□□□□□ -0.49
LTBR-211ENST00000543190 CNFNQ9BYD5 112 aa12□□□□□ -0.49
LTBR-211ENST00000543190 FAT3Q8TDW7 4589 aa11.99□□□□□ -0.49
LTBR-211ENST00000543190 MUC21A0A0G2JKD1 596 aa11.99□□□□□ -0.49
LTBR-211ENST00000543190 MUC21A0A140T8X8 626 aa11.99□□□□□ -0.49
LTBR-211ENST00000543190 REG3AQ06141 175 aa11.99□□□□□ -0.49
LTBR-211ENST00000543190 CENPWQ5EE01 88 aa11.99□□□□□ -0.49
LTBR-211ENST00000543190 A0A1B0GV50 99 aa11.98□□□□□ -0.49
LTBR-211ENST00000543190 XKRY2A2RUG3 117 aa11.98□□□□□ -0.49
LTBR-211ENST00000543190 EIF5AL1Q6IS14 154 aaKnown RBP11.98□□□□□ -0.49
LTBR-211ENST00000543190 TEX46H3BTG2 121 aa11.97□□□□□ -0.49
LTBR-211ENST00000543190 PDE6DO43924 150 aa11.97□□□□□ -0.49
LTBR-211ENST00000543190 MEF2BQ02080 365 aaPredicted RBP11.97□□□□□ -0.49
LTBR-211ENST00000543190 SUMO4Q6EEV6 95 aa11.97□□□□□ -0.49
LTBR-211ENST00000543190 RASL11AQ6T310 242 aa11.97□□□□□ -0.49
LTBR-211ENST00000543190 C9orf62Q8N4C0 152 aa11.97□□□□□ -0.49
LTBR-211ENST00000543190 C20orf203Q8NBC4 194 aa11.97□□□□□ -0.49
LTBR-211ENST00000543190 OR2D3Q8NGH3 330 aa11.97□□□□□ -0.49
LTBR-211ENST00000543190 NIT2Q9NQR4 276 aa11.97□□□□□ -0.49
LTBR-211ENST00000543190 BIN3Q9NQY0 253 aa11.97□□□□□ -0.49
LTBR-211ENST00000543190 TRGC1P0CF51 173 aa11.96□□□□□ -0.49
LTBR-211ENST00000543190 RPL37AP61513 92 aaKnown RBP11.96□□□□□ -0.49
LTBR-211ENST00000543190 GAGE6Q13070 117 aa11.96□□□□□ -0.49
LTBR-211ENST00000543190 DAZAP1Q96EP5 407 aaKnown RBP11.96□□□□□ -0.49
LTBR-211ENST00000543190 GNG13Q9P2W3 67 aa11.96□□□□□ -0.49
LTBR-211ENST00000543190 TRBV20OR9-2A0A075B6H5 130 aa11.95□□□□□ -0.5
LTBR-211ENST00000543190 CTRLP40313 264 aa11.95□□□□□ -0.5
LTBR-211ENST00000543190 GNG4P50150 75 aa11.95□□□□□ -0.5
LTBR-211ENST00000543190 SULT1A2P50226 295 aa11.95□□□□□ -0.5
LTBR-211ENST00000543190 RNF185Q96GF1 192 aa11.95□□□□□ -0.5
LTBR-211ENST00000543190 TMEM243Q9BU79 118 aa11.95□□□□□ -0.5
LTBR-211ENST00000543190 DPH3P1Q9H4G8 78 aa11.95□□□□□ -0.5
LTBR-211ENST00000543190 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.95□□□□□ -0.5
LTBR-211ENST00000543190 TAGLN2P37802 199 aaKnown RBP11.94□□□□□ -0.5
LTBR-211ENST00000543190 MGPP08493 103 aa11.92□□□□□ -0.5
LTBR-211ENST00000543190 NTF3P20783 257 aa11.92□□□□□ -0.5
LTBR-211ENST00000543190 NKX2-5P52952 324 aaPredicted RBP11.92□□□□□ -0.5
LTBR-211ENST00000543190 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
LTBR-211ENST00000543190 LYZL1Q6UWQ5 148 aa11.92□□□□□ -0.5
LTBR-211ENST00000543190 HMCN2Q8NDA2 5059 aa11.91□□□□□ -0.5
LTBR-211ENST00000543190 IGLV4-60A0A075B6I1 120 aa11.91□□□□□ -0.5
LTBR-211ENST00000543190 RAB19A4D1S5 217 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms