RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 S100A9P06702 114 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-230ENST00000543114 OR5AL1P0C617 328 aa12.75□□□□□ -0.37
CACNA1C-230ENST00000543114 RGS21Q2M5E4 152 aa12.75□□□□□ -0.37
CACNA1C-230ENST00000543114 C14orf177Q52M58 125 aa12.75□□□□□ -0.37
CACNA1C-230ENST00000543114 HLA-DQA1P01909 254 aa12.74□□□□□ -0.37
CACNA1C-230ENST00000543114 SPANXN1Q5VSR9 72 aa12.74□□□□□ -0.37
CACNA1C-230ENST00000543114 NTM-AS1Q6ZSK4 140 aa12.74□□□□□ -0.37
CACNA1C-230ENST00000543114 CHCHD5Q9BSY4 110 aa12.74□□□□□ -0.37
CACNA1C-230ENST00000543114 UMAD1C9J7I0 102 aa12.73□□□□□ -0.37
CACNA1C-230ENST00000543114 USP17L23D6RBM5 183 aa12.73□□□□□ -0.37
CACNA1C-230ENST00000543114 SSTP61278 116 aa12.73□□□□□ -0.37
CACNA1C-230ENST00000543114 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
CACNA1C-230ENST00000543114 F5H697 171 aa12.72□□□□□ -0.37
CACNA1C-230ENST00000543114 IGLV2-8P01709 118 aa12.72□□□□□ -0.37
CACNA1C-230ENST00000543114 CLPSL2Q6UWE3 100 aa12.72□□□□□ -0.37
CACNA1C-230ENST00000543114 VAX2Q9UIW0 290 aa12.72□□□□□ -0.37
CACNA1C-230ENST00000543114 AP1S3Q96PC3 154 aa12.71□□□□□ -0.37
CACNA1C-230ENST00000543114 DERL1Q9BUN8 251 aa12.71□□□□□ -0.37
CACNA1C-230ENST00000543114 BCL2L11O43521 198 aa12.7□□□□□ -0.38
CACNA1C-230ENST00000543114 RPL35P42766 123 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-230ENST00000543114 PKIAP61925 76 aa12.7□□□□□ -0.38
CACNA1C-230ENST00000543114 MIAQ16674 131 aa12.7□□□□□ -0.38
CACNA1C-230ENST00000543114 TMUB2Q71RG4 321 aa12.7□□□□□ -0.38
CACNA1C-230ENST00000543114 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-230ENST00000543114 PRR34Q9NV39 138 aa12.7□□□□□ -0.38
CACNA1C-230ENST00000543114 PRSS1P07477 247 aa12.69□□□□□ -0.38
CACNA1C-230ENST00000543114 H2AFB1P0C5Y9 115 aa12.69□□□□□ -0.38
CACNA1C-230ENST00000543114 RBX1P62877 108 aa12.69□□□□□ -0.38
CACNA1C-230ENST00000543114 HMSDA8MTL9 139 aa12.68□□□□□ -0.38
CACNA1C-230ENST00000543114 SMIM17P0DL12 118 aa12.68□□□□□ -0.38
CACNA1C-230ENST00000543114 GZMBP10144 247 aa12.68□□□□□ -0.38
CACNA1C-230ENST00000543114 GAGE6Q13070 117 aa12.68□□□□□ -0.38
CACNA1C-230ENST00000543114 TMEM97Q5BJF2 176 aa12.68□□□□□ -0.38
CACNA1C-230ENST00000543114 KRTAP26-1Q6PEX3 210 aa12.68□□□□□ -0.38
CACNA1C-230ENST00000543114 TRBV25-1A0A075B6N4 114 aa12.67□□□□□ -0.38
CACNA1C-230ENST00000543114 KANTRA0A1W2PQU2 76 aa12.67□□□□□ -0.38
CACNA1C-230ENST00000543114 LINC00269Q8N2A0 174 aa12.67□□□□□ -0.38
CACNA1C-230ENST00000543114 C11orf52Q96A22 123 aa12.67□□□□□ -0.38
CACNA1C-230ENST00000543114 A0A0D9SG52 128 aa12.66□□□□□ -0.38
CACNA1C-230ENST00000543114 CCL20P78556 96 aa12.66□□□□□ -0.38
CACNA1C-230ENST00000543114 CENPWQ5EE01 88 aa12.66□□□□□ -0.38
CACNA1C-230ENST00000543114 TPPP3Q9BW30 176 aa12.66□□□□□ -0.38
CACNA1C-230ENST00000543114 M0QY20 66 aa12.65□□□□□ -0.38
CACNA1C-230ENST00000543114 MGPP08493 103 aa12.65□□□□□ -0.38
CACNA1C-230ENST00000543114 IGLC6P0CF74 106 aa12.65□□□□□ -0.38
CACNA1C-230ENST00000543114 IQCJQ1A5X6 159 aa12.65□□□□□ -0.38
CACNA1C-230ENST00000543114 GNG13Q9P2W3 67 aa12.65□□□□□ -0.38
CACNA1C-230ENST00000543114 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.65□□□□□ -0.38
CACNA1C-230ENST00000543114 UBR4Q5T4S7 5183 aa12.64□□□□□ -0.39
CACNA1C-230ENST00000543114 RPL37AP61513 92 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-230ENST00000543114 SUMO4Q6EEV6 95 aa12.64□□□□□ -0.39
CACNA1C-230ENST00000543114 C9orf163Q8N9P6 203 aa12.64□□□□□ -0.39
CACNA1C-230ENST00000543114 MANBALQ9NQG1 85 aa12.64□□□□□ -0.39
CACNA1C-230ENST00000543114 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
CACNA1C-230ENST00000543114 PANO1I0J062 215 aa12.63□□□□□ -0.39
CACNA1C-230ENST00000543114 OXTP01178 125 aa12.63□□□□□ -0.39
CACNA1C-230ENST00000543114 HNRNPA3P51991 378 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-230ENST00000543114 DGAT2L7PQ6IED9 249 aa12.63□□□□□ -0.39
CACNA1C-230ENST00000543114 FER1L6-AS1Q8NA97 138 aa12.63□□□□□ -0.39
CACNA1C-230ENST00000543114 OR2D3Q8NGH3 330 aa12.63□□□□□ -0.39
CACNA1C-230ENST00000543114 IGLV10-54A0A075B6I4 117 aa12.62□□□□□ -0.39
CACNA1C-230ENST00000543114 C19orf71A6NCJ1 209 aa12.62□□□□□ -0.39
CACNA1C-230ENST00000543114 REG3AQ06141 175 aa12.62□□□□□ -0.39
CACNA1C-230ENST00000543114 C20orf203Q8NBC4 194 aa12.62□□□□□ -0.39
CACNA1C-230ENST00000543114 EIF5AP63241 154 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-230ENST00000543114 H7C1H1 209 aa12.6□□□□□ -0.39
CACNA1C-230ENST00000543114 NKX2-5P52952 324 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-230ENST00000543114 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-230ENST00000543114 SERTAD4-AS1Q5TG53 156 aa12.6□□□□□ -0.39
CACNA1C-230ENST00000543114 DAZAP1Q96EP5 407 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-230ENST00000543114 TRAV1-1A0A0B4J248 108 aa12.59□□□□□ -0.39
CACNA1C-230ENST00000543114 RAB19A4D1S5 217 aa12.59□□□□□ -0.39
CACNA1C-230ENST00000543114 CACNG7P62955 275 aa12.59□□□□□ -0.39
CACNA1C-230ENST00000543114 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
CACNA1C-230ENST00000543114 TRBV20OR9-2A0A075B6H5 130 aa12.58□□□□□ -0.4
CACNA1C-230ENST00000543114 IGLV4-60A0A075B6I1 120 aa12.58□□□□□ -0.4
CACNA1C-230ENST00000543114 GNG4P50150 75 aa12.58□□□□□ -0.4
CACNA1C-230ENST00000543114 SDIM1Q6ZPB5 146 aa12.58□□□□□ -0.4
CACNA1C-230ENST00000543114 TMEM243Q9BU79 118 aa12.58□□□□□ -0.4
CACNA1C-230ENST00000543114 RASL11AQ6T310 242 aa12.57□□□□□ -0.4
CACNA1C-230ENST00000543114 CLRN3Q8NCR9 226 aa12.57□□□□□ -0.4
CACNA1C-230ENST00000543114 SMIM12Q96EX1 92 aa12.57□□□□□ -0.4
CACNA1C-230ENST00000543114 P01737 135 aa12.56□□□□□ -0.4
CACNA1C-230ENST00000543114 CNBPP62633 177 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-230ENST00000543114 MEF2BQ02080 365 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-230ENST00000543114 LYZL1Q6UWQ5 148 aa12.56□□□□□ -0.4
CACNA1C-230ENST00000543114 A0A1B0GUV1 79 aa12.55□□□□□ -0.4
CACNA1C-230ENST00000543114 hDV102S1A0JD36 115 aa12.55□□□□□ -0.4
CACNA1C-230ENST00000543114 F2Z2F3 143 aa12.55□□□□□ -0.4
CACNA1C-230ENST00000543114 TRGC1P0CF51 173 aa12.55□□□□□ -0.4
CACNA1C-230ENST00000543114 RAB5CP51148 216 aa12.55□□□□□ -0.4
CACNA1C-230ENST00000543114 CIRBPQ14011 172 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-230ENST00000543114 PGLYRP4Q96LB8 373 aa12.55□□□□□ -0.4
CACNA1C-230ENST00000543114 DPH3P1Q9H4G8 78 aa12.55□□□□□ -0.4
CACNA1C-230ENST00000543114 TRAV8-4A0A0B4J246 113 aa12.54□□□□□ -0.4
CACNA1C-230ENST00000543114 XKRY2A2RUG3 117 aa12.54□□□□□ -0.4
CACNA1C-230ENST00000543114 IFNA1P01562 189 aa12.54□□□□□ -0.4
CACNA1C-230ENST00000543114 NIT2Q9NQR4 276 aa12.54□□□□□ -0.4
CACNA1C-230ENST00000543114 PDE6DO43924 150 aa12.53□□□□□ -0.4
CACNA1C-230ENST00000543114 SLPIP03973 132 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms