RNA–Protein interactions for RNA: ENST00000542790.1

VPS33A-207, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 1,133 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-207ENST00000542790 RPL36AP83881 106 aaKnown RBP8.49□□□□□ -1.05
VPS33A-207ENST00000542790 C1orf134Q5TEV5 83 aa8.49□□□□□ -1.05
VPS33A-207ENST00000542790 RPL36ALQ969Q0 106 aaKnown RBP8.49□□□□□ -1.05
VPS33A-207ENST00000542790 GFRA4Q9GZZ7 299 aa8.49□□□□□ -1.05
VPS33A-207ENST00000542790 Q9UF83 564 aa8.49□□□□□ -1.05
VPS33A-207ENST00000542790 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 TRAV9-2A0A087WT02 112 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 EVI2AP22794 236 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 OR10J3Q5JRS4 329 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 LELP1Q5T871 98 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 LINC00336Q6ZUF6 198 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 SMIM15Q7Z3B0 74 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 OR10G8Q8NGN5 311 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 BORCS7Q96B45 105 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 PGLYRP4Q96LB8 373 aa8.48□□□□□ -1.05
VPS33A-207ENST00000542790 A0A087WWC5 75 aa8.47□□□□□ -1.05
VPS33A-207ENST00000542790 H7C1H1 209 aa8.47□□□□□ -1.05
VPS33A-207ENST00000542790 K7EP13 123 aa8.47□□□□□ -1.05
VPS33A-207ENST00000542790 MGPP08493 103 aa8.47□□□□□ -1.05
VPS33A-207ENST00000542790 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
VPS33A-207ENST00000542790 DPH3P1Q9H4G8 78 aa8.47□□□□□ -1.05
VPS33A-207ENST00000542790 V9GYV3 84 aa8.47□□□□□ -1.05
VPS33A-207ENST00000542790 HIGD1CA8MV81 97 aa8.46□□□□□ -1.06
VPS33A-207ENST00000542790 DNAH10OSP0CZ25 163 aa8.46□□□□□ -1.06
VPS33A-207ENST00000542790 UBE2D3P61077 147 aa8.46□□□□□ -1.06
VPS33A-207ENST00000542790 UBE2D2P62837 147 aa8.46□□□□□ -1.06
VPS33A-207ENST00000542790 WFDC10BQ8IUB3 73 aa8.46□□□□□ -1.06
VPS33A-207ENST00000542790 C6orf223Q8N319 242 aa8.46□□□□□ -1.06
VPS33A-207ENST00000542790 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.46□□□□□ -1.06
VPS33A-207ENST00000542790 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 A0A1B0GUT8 65 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 M0QY20 66 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 RTL8CO15255 209 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 UQCC3Q6UW78 93 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 NEXN-AS1Q8NBZ9 246 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 KRTAP1-5Q9BYS1 174 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 NAT8BQ9UHF3 227 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 TNFRSF18Q9Y5U5 241 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 KMT2AQ03164 3969 aa8.45□□□□□ -1.06
VPS33A-207ENST00000542790 PNRC1Q12796 327 aaPredicted RBP8.44□□□□□ -1.06
VPS33A-207ENST00000542790 SUMO4Q6EEV6 95 aa8.44□□□□□ -1.06
VPS33A-207ENST00000542790 C10orf126Q8N4M7 172 aa8.44□□□□□ -1.06
VPS33A-207ENST00000542790 DNAJC30Q96LL9 226 aa8.44□□□□□ -1.06
VPS33A-207ENST00000542790 RIGQ13278 110 aa8.43□□□□□ -1.06
VPS33A-207ENST00000542790 LINC01556Q5JQF7 62 aa8.43□□□□□ -1.06
VPS33A-207ENST00000542790 RASL11AQ6T310 242 aa8.43□□□□□ -1.06
VPS33A-207ENST00000542790 DAZ4Q86SG3 579 aaKnown RBP8.43□□□□□ -1.06
VPS33A-207ENST00000542790 NUP35Q8NFH5 326 aa8.43□□□□□ -1.06
VPS33A-207ENST00000542790 FRZBQ92765 325 aa8.43□□□□□ -1.06
VPS33A-207ENST00000542790 DAZ3Q9NR90 486 aaKnown RBP8.43□□□□□ -1.06
VPS33A-207ENST00000542790 SMIM27A0A1W2PRY6 76 aa8.42□□□□□ -1.06
VPS33A-207ENST00000542790 PRSS29PA6NIE9 313 aa8.42□□□□□ -1.06
VPS33A-207ENST00000542790 PPP1R2P9O14990 202 aa8.42□□□□□ -1.06
VPS33A-207ENST00000542790 TMEM97Q5BJF2 176 aa8.42□□□□□ -1.06
VPS33A-207ENST00000542790 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
VPS33A-207ENST00000542790 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
VPS33A-207ENST00000542790 TMEM191AQ9H0A3 160 aa8.41□□□□□ -1.06
VPS33A-207ENST00000542790 NACAE9PAV3 2078 aa8.41□□□□□ -1.06
VPS33A-207ENST00000542790 TRBV6-8A0A0A6YYG3 113 aa8.4□□□□□ -1.06
VPS33A-207ENST00000542790 A0A1B0GW15 77 aa8.4□□□□□ -1.06
VPS33A-207ENST00000542790 TMEM218A2RU14 115 aa8.4□□□□□ -1.06
VPS33A-207ENST00000542790 MT-ND4LP03901 98 aa8.4□□□□□ -1.06
VPS33A-207ENST00000542790 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
VPS33A-207ENST00000542790 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
VPS33A-207ENST00000542790 URGCP-MRPS24S4R325 110 aa8.4□□□□□ -1.06
VPS33A-207ENST00000542790 TRAV26-2A0A0B4J265 109 aa8.39□□□□□ -1.07
VPS33A-207ENST00000542790 F8W036 122 aa8.39□□□□□ -1.07
VPS33A-207ENST00000542790 IGHV3-30P01768 117 aa8.39□□□□□ -1.07
VPS33A-207ENST00000542790 IGHV3-33P01772 117 aa8.39□□□□□ -1.07
VPS33A-207ENST00000542790 IGHV3-30-3P0DP02 117 aa8.39□□□□□ -1.07
VPS33A-207ENST00000542790 IGHV3-30-5P0DP03 117 aa8.39□□□□□ -1.07
VPS33A-207ENST00000542790 KCNIP4Q6PIL6 250 aa8.39□□□□□ -1.07
VPS33A-207ENST00000542790 ANAPC16Q96DE5 110 aa8.39□□□□□ -1.07
VPS33A-207ENST00000542790 A0A087WX48 190 aa8.38□□□□□ -1.07
VPS33A-207ENST00000542790 LINC00862A6NCI5 91 aa8.38□□□□□ -1.07
VPS33A-207ENST00000542790 IBA57-AS1B1ANH7 110 aa8.38□□□□□ -1.07
VPS33A-207ENST00000542790 NIT1Q86X76 327 aa8.38□□□□□ -1.07
VPS33A-207ENST00000542790 CHCHD7Q9BUK0 85 aa8.38□□□□□ -1.07
VPS33A-207ENST00000542790 DNAH6Q9C0G6 4158 aa8.38□□□□□ -1.07
VPS33A-207ENST00000542790 TRBV25-1A0A075B6N4 114 aa8.37□□□□□ -1.07
VPS33A-207ENST00000542790 TMEM262E9PQX1 116 aa8.37□□□□□ -1.07
VPS33A-207ENST00000542790 S100A8P05109 93 aa8.37□□□□□ -1.07
VPS33A-207ENST00000542790 RAB4AP20338 218 aa8.37□□□□□ -1.07
VPS33A-207ENST00000542790 PKIAP61925 76 aa8.37□□□□□ -1.07
VPS33A-207ENST00000542790 LAGE3Q14657 143 aa8.37□□□□□ -1.07
VPS33A-207ENST00000542790 NTM-AS1Q6ZSK4 140 aa8.37□□□□□ -1.07
VPS33A-207ENST00000542790 MRAP2Q96G30 205 aa8.37□□□□□ -1.07
VPS33A-207ENST00000542790 SEC11CQ9BY50 192 aa8.37□□□□□ -1.07
VPS33A-207ENST00000542790 ADCYAP1P18509 176 aa8.36□□□□□ -1.07
VPS33A-207ENST00000542790 CAMPP49913 170 aa8.36□□□□□ -1.07
VPS33A-207ENST00000542790 ELOBQ15370 118 aa8.36□□□□□ -1.07
VPS33A-207ENST00000542790 IQCJQ1A5X6 159 aa8.36□□□□□ -1.07
VPS33A-207ENST00000542790 AMN1Q8IY45 258 aa8.36□□□□□ -1.07
VPS33A-207ENST00000542790 RPL39LQ96EH5 51 aaKnown RBP8.36□□□□□ -1.07
VPS33A-207ENST00000542790 RNF185Q96GF1 192 aa8.36□□□□□ -1.07
VPS33A-207ENST00000542790 CHCHD5Q9BSY4 110 aa8.36□□□□□ -1.07
VPS33A-207ENST00000542790 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
VPS33A-207ENST00000542790 TRBV6-5A0A0K0K1A5 114 aa8.35□□□□□ -1.07
VPS33A-207ENST00000542790 A0A1B0GVY2 172 aa8.35□□□□□ -1.07
VPS33A-207ENST00000542790 PPP1R17O96001 155 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms