RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 KLK9Q9UKQ9 250 aa6.06□□□□□ -1.44
PDLIM5-221ENST00000542407 IGHV1-69DA0A0B4J2H0 117 aa6.06□□□□□ -1.44
PDLIM5-221ENST00000542407 SH2D1AO60880 128 aa6.06□□□□□ -1.44
PDLIM5-221ENST00000542407 IGHV1-69P01742 117 aa6.06□□□□□ -1.44
PDLIM5-221ENST00000542407 COX6B1P14854 86 aa6.06□□□□□ -1.44
PDLIM5-221ENST00000542407 MYOZ3Q8TDC0 251 aa6.06□□□□□ -1.44
PDLIM5-221ENST00000542407 KLK15Q9H2R5 256 aa6.06□□□□□ -1.44
PDLIM5-221ENST00000542407 TRBV7-3A0A075B6L6 115 aa6.06□□□□□ -1.44
PDLIM5-221ENST00000542407 CELSR2Q9HCU4 2923 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 ATP5G1P05496 136 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 C11orf44Q8N8P7 122 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 SHANK2-AS3Q9BTD1 123 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 IGHV3OR16-10A0A075B7F0 116 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 MYMXA0A1B0GTQ4 84 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 TCL1BO95988 128 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 MSMBP08118 114 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 IGHV4-38-2P0DP08 117 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 DSCR9P59020 149 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 Q9UF83 564 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 CRYBG3Q68DQ2 2970 aa6.05□□□□□ -1.44
PDLIM5-221ENST00000542407 NBPF19A0A087WUL8 3843 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 TRAV8-4A0A0B4J246 113 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 HILS1P60008 231 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 KRTAP10-9P60411 292 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 BRD3OSQ6XYD6 125 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 C5orf56Q8N8D9 126 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 TMEM75Q8N9X5 138 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 AKAP6Q13023 2319 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 MYO18BQ8IUG5 2567 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 C19orf54Q5BKX5 351 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 CEMP1Q6PRD7 247 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 Q8TAT8 98 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 NXT2Q9NPJ8 142 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 LINC00527Q9UJ94 153 aa6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 ZNF256Q9Y2P7 627 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-221ENST00000542407 TRBV19A0A075B6N1 114 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 IMUPQ9GZP8 106 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 AAMDCQ9H7C9 122 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 IGKV2-40A0A087WW87 121 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 ZNF815PA8K554 130 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 ATP6V0E1O15342 81 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 IGKV2D-40P01614 121 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 SLC25A16P16260 332 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 PSMB8P28062 276 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 S4R3C0 116 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 CELSR1Q9NYQ6 3014 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 H7C2G1 150 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 HLA-DMBP28068 263 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 CYSTM1Q9H1C7 97 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 C16orf95Q9H693 158 aa6.03□□□□□ -1.44
PDLIM5-221ENST00000542407 EPG5Q9HCE0 2579 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 KMT2BQ9UMN6 2715 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 TRAV26-2A0A0B4J265 109 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 B4DSR2 109 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 CRIP2P52943 208 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 C1orf158Q8N1D5 194 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 ZNF491Q8N8L2 437 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 RNF185Q96GF1 192 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 H3BRN7 92 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 SPRY2O43597 315 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 PLNP26678 52 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 RPL13AP40429 203 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 LCE2DQ5TA82 110 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 IGFL4Q6B9Z1 124 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 DPH3P1Q9H4G8 78 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 TMEM14CQ9P0S9 112 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 MOB4Q9Y3A3 225 aa6.02□□□□□ -1.45
PDLIM5-221ENST00000542407 MED13LQ71F56 2210 aa6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 ADARB2-AS1A8MUL3 147 aa6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 MRPS12O15235 138 aaKnown RBP6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 MRPL55Q7Z7F7 128 aaKnown RBP6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 NEXN-AS1Q8NBZ9 246 aa6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 KLHL30-AS1Q8NEE0 82 aa6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 SPTAN1Q13813 2472 aaKnown RBP6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 A6NDX4 124 aa6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 G3V318 75 aa6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 ZNF80P51504 273 aaPredicted RBP6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 LAGE3Q14657 143 aa6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 ZNF56Q15929 161 aa6.01□□□□□ -1.45
PDLIM5-221ENST00000542407 WNK2Q9Y3S1 2297 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 SLC25A20O43772 301 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 IGHV3-23P01764 117 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 IGF1P05019 195 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 CTSGP08311 255 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 ECSCRQ19T08 205 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 KRTAP1-3Q8IUG1 177 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 Q8N8P6 123 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 UBE2D3P61077 147 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 UBE2D2P62837 147 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 LINC01356Q8N9X3 169 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 TRBV6-1A0A0K0K1D8 114 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 F8VRH5 84 aa6□□□□□ -1.45
PDLIM5-221ENST00000542407 NTN5Q8WTR8 489 aaPredicted RBP6□□□□□ -1.45
PDLIM5-221ENST00000542407 TRAV12-2A0A075B6T6 113 aa5.99□□□□□ -1.45
PDLIM5-221ENST00000542407 FSHBP01225 129 aa5.99□□□□□ -1.45
PDLIM5-221ENST00000542407 DEFB113Q30KQ7 82 aa5.99□□□□□ -1.45
PDLIM5-221ENST00000542407 C15orf32Q32M92 178 aa5.99□□□□□ -1.45
PDLIM5-221ENST00000542407 NDUFA11Q86Y39 141 aa5.99□□□□□ -1.45
PDLIM5-221ENST00000542407 UBE2E2Q96LR5 201 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms