RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 CTXND1A0A1B0GTU2 59 aa8.37□□□□□ -1.07
SCARB1-207ENST00000541661 HLA-DQA1P01909 254 aa8.37□□□□□ -1.07
SCARB1-207ENST00000541661 CIRBPQ14011 172 aaKnown RBP8.37□□□□□ -1.07
SCARB1-207ENST00000541661 ZNF345Q14585 488 aa8.37□□□□□ -1.07
SCARB1-207ENST00000541661 CHCHD5Q9BSY4 110 aa8.37□□□□□ -1.07
SCARB1-207ENST00000541661 TMEM97Q5BJF2 176 aa8.36□□□□□ -1.07
SCARB1-207ENST00000541661 TEX261Q6UWH6 196 aa8.36□□□□□ -1.07
SCARB1-207ENST00000541661 NTM-AS1Q6ZSK4 140 aa8.36□□□□□ -1.07
SCARB1-207ENST00000541661 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.36□□□□□ -1.07
SCARB1-207ENST00000541661 CLRN3Q8NCR9 226 aa8.36□□□□□ -1.07
SCARB1-207ENST00000541661 VAX2Q9UIW0 290 aa8.36□□□□□ -1.07
SCARB1-207ENST00000541661 LRP2P98164 4655 aa8.36□□□□□ -1.07
SCARB1-207ENST00000541661 LTAP01374 205 aa8.35□□□□□ -1.07
SCARB1-207ENST00000541661 UBE2G1P62253 170 aa8.35□□□□□ -1.07
SCARB1-207ENST00000541661 ATP6V1G1O75348 118 aa8.34□□□□□ -1.07
SCARB1-207ENST00000541661 CXCL1P09341 107 aa8.34□□□□□ -1.07
SCARB1-207ENST00000541661 FHITP49789 147 aa8.34□□□□□ -1.07
SCARB1-207ENST00000541661 CNBPP62633 177 aaKnown RBP8.34□□□□□ -1.07
SCARB1-207ENST00000541661 RBX1P62877 108 aa8.34□□□□□ -1.07
SCARB1-207ENST00000541661 ZNF56Q15929 161 aa8.34□□□□□ -1.07
SCARB1-207ENST00000541661 RPL7L1Q6DKI1 246 aaKnown RBP8.34□□□□□ -1.07
SCARB1-207ENST00000541661 TMUB2Q71RG4 321 aa8.34□□□□□ -1.07
SCARB1-207ENST00000541661 LINC00269Q8N2A0 174 aa8.34□□□□□ -1.07
SCARB1-207ENST00000541661 KCNRGQ8N5I3 272 aa8.34□□□□□ -1.07
SCARB1-207ENST00000541661 TCEAL7Q9BRU2 100 aa8.34□□□□□ -1.07
SCARB1-207ENST00000541661 ARPC5O15511 151 aa8.33□□□□□ -1.08
SCARB1-207ENST00000541661 SLC51BQ86UW2 128 aa8.33□□□□□ -1.08
SCARB1-207ENST00000541661 OR10AG1Q8NH19 301 aa8.33□□□□□ -1.08
SCARB1-207ENST00000541661 RNF185Q96GF1 192 aa8.33□□□□□ -1.08
SCARB1-207ENST00000541661 SSBP4Q9BWG4 385 aaPredicted RBP8.33□□□□□ -1.08
SCARB1-207ENST00000541661 ZNF471Q9BX82 626 aaPredicted RBP8.33□□□□□ -1.08
SCARB1-207ENST00000541661 RNF213Q63HN8 5207 aa8.32□□□□□ -1.08
SCARB1-207ENST00000541661 FXYD6-FXYD2A0A087WZ82 144 aa8.32□□□□□ -1.08
SCARB1-207ENST00000541661 BORCS7-ASMTA0A0B4J1R7 106 aa8.32□□□□□ -1.08
SCARB1-207ENST00000541661 SNAI2O43623 268 aa8.32□□□□□ -1.08
SCARB1-207ENST00000541661 TRBV25-1A0A075B6N4 114 aa8.31□□□□□ -1.08
SCARB1-207ENST00000541661 S100A1P23297 94 aa8.31□□□□□ -1.08
SCARB1-207ENST00000541661 GAGE6Q13070 117 aa8.31□□□□□ -1.08
SCARB1-207ENST00000541661 IQCJQ1A5X6 159 aa8.31□□□□□ -1.08
SCARB1-207ENST00000541661 CLPSL2Q6UWE3 100 aa8.31□□□□□ -1.08
SCARB1-207ENST00000541661 INO80EQ8NBZ0 244 aaPredicted RBP8.31□□□□□ -1.08
SCARB1-207ENST00000541661 FAM210AQ96ND0 272 aa8.31□□□□□ -1.08
SCARB1-207ENST00000541661 DERL1Q9BUN8 251 aa8.31□□□□□ -1.08
SCARB1-207ENST00000541661 KIF25-AS1Q9Y6Z4 181 aa8.31□□□□□ -1.08
SCARB1-207ENST00000541661 IGHV3-64A0A075B6Q5 118 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 A0A087WYN8 130 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 MAP1LC3B2A6NCE7 125 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 LINC00862A6NCI5 91 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 F5H697 171 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 OR5AL1P0C617 328 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 REG3AQ06141 175 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 CLLU1Q5K131 121 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 AKR1C8PQ5T2L2 129 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 MLST8Q9BVC4 326 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 MAP1LC3BQ9GZQ8 125 aa8.3□□□□□ -1.08
SCARB1-207ENST00000541661 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.29□□□□□ -1.08
SCARB1-207ENST00000541661 TRAV8-4A0A0B4J246 113 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 hDV102S1A0JD36 115 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 BCL2L11O43521 198 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 P01737 135 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 SLPIP03973 132 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 S100A9P06702 114 aaKnown RBP8.29□□□□□ -1.08
SCARB1-207ENST00000541661 AKR1C3P42330 323 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 SPANXN1Q5VSR9 72 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 CST9LP1Q5W188 147 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 STOML3Q8TAV4 291 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 SPACA4Q8TDM5 124 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 MED9Q9NWA0 146 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
SCARB1-207ENST00000541661 IGLV10-54A0A075B6I4 117 aa8.28□□□□□ -1.08
SCARB1-207ENST00000541661 IGHV1-24A0A0C4DH33 117 aa8.28□□□□□ -1.08
SCARB1-207ENST00000541661 A0A1B0GUV1 79 aa8.28□□□□□ -1.08
SCARB1-207ENST00000541661 KANTRA0A1W2PQU2 76 aa8.28□□□□□ -1.08
SCARB1-207ENST00000541661 GZMBP10144 247 aa8.28□□□□□ -1.08
SCARB1-207ENST00000541661 SLC7A5P1Q8MH63 180 aa8.28□□□□□ -1.08
SCARB1-207ENST00000541661 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
SCARB1-207ENST00000541661 DPH3Q96FX2 82 aa8.28□□□□□ -1.08
SCARB1-207ENST00000541661 MUC21A0A0G2JKD1 596 aa8.27□□□□□ -1.09
SCARB1-207ENST00000541661 MUC21A0A140T8X8 626 aa8.27□□□□□ -1.09
SCARB1-207ENST00000541661 LINC01600Q96MT4 127 aa8.27□□□□□ -1.09
SCARB1-207ENST00000541661 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
SCARB1-207ENST00000541661 M0QY20 66 aa8.26□□□□□ -1.09
SCARB1-207ENST00000541661 PAGE4O60829 102 aa8.26□□□□□ -1.09
SCARB1-207ENST00000541661 CHTF8P0CG12 524 aa8.26□□□□□ -1.09
SCARB1-207ENST00000541661 SMIM17P0DL12 118 aa8.26□□□□□ -1.09
SCARB1-207ENST00000541661 RAB14P61106 215 aa8.26□□□□□ -1.09
SCARB1-207ENST00000541661 BAGE2Q86Y30 109 aa8.26□□□□□ -1.09
SCARB1-207ENST00000541661 CYTL1Q9NRR1 136 aa8.26□□□□□ -1.09
SCARB1-207ENST00000541661 PHOX2AO14813 284 aa8.25□□□□□ -1.09
SCARB1-207ENST00000541661 EIF5AP63241 154 aaKnown RBP8.25□□□□□ -1.09
SCARB1-207ENST00000541661 C7orf33Q8WU49 177 aa8.25□□□□□ -1.09
SCARB1-207ENST00000541661 AP1S3Q96PC3 154 aa8.25□□□□□ -1.09
SCARB1-207ENST00000541661 GFRA4Q9GZZ7 299 aa8.25□□□□□ -1.09
SCARB1-207ENST00000541661 DPH3P1Q9H4G8 78 aa8.25□□□□□ -1.09
SCARB1-207ENST00000541661 IGLV4-60A0A075B6I1 120 aa8.24□□□□□ -1.09
SCARB1-207ENST00000541661 H7C1H1 209 aa8.24□□□□□ -1.09
SCARB1-207ENST00000541661 SSTP61278 116 aa8.24□□□□□ -1.09
SCARB1-207ENST00000541661 SCO2A0A1W2PP80 73 aa8.23□□□□□ -1.09
SCARB1-207ENST00000541661 MBD3L1Q8WWY6 194 aa8.23□□□□□ -1.09
SCARB1-207ENST00000541661 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms