RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
SUDS3-203ENST00000541591 GAGE6Q13070 117 aa9.19□□□□□ -0.94
SUDS3-203ENST00000541591 ENHOQ6UWT2 76 aa9.19□□□□□ -0.94
SUDS3-203ENST00000541591 NTM-AS1Q6ZSK4 140 aa9.19□□□□□ -0.94
SUDS3-203ENST00000541591 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
SUDS3-203ENST00000541591 RMI2Q96E14 147 aa9.19□□□□□ -0.94
SUDS3-203ENST00000541591 KIF25-AS1Q9Y6Z4 181 aa9.19□□□□□ -0.94
SUDS3-203ENST00000541591 CRPP02741 224 aa9.18□□□□□ -0.94
SUDS3-203ENST00000541591 ANGP03950 147 aaKnown RBP9.18□□□□□ -0.94
SUDS3-203ENST00000541591 CXCL1P09341 107 aa9.18□□□□□ -0.94
SUDS3-203ENST00000541591 OR5AL1P0C617 328 aa9.18□□□□□ -0.94
SUDS3-203ENST00000541591 SCXQ7RTU7 201 aa9.18□□□□□ -0.94
SUDS3-203ENST00000541591 OR2D3Q8NGH3 330 aa9.18□□□□□ -0.94
SUDS3-203ENST00000541591 SSBP4Q9BWG4 385 aaPredicted RBP9.18□□□□□ -0.94
SUDS3-203ENST00000541591 MANBALQ9NQG1 85 aa9.18□□□□□ -0.94
SUDS3-203ENST00000541591 SMIM17P0DL12 118 aa9.17□□□□□ -0.94
SUDS3-203ENST00000541591 EIF5AP63241 154 aaKnown RBP9.17□□□□□ -0.94
SUDS3-203ENST00000541591 ATRAIDQ6UW56 229 aa9.17□□□□□ -0.94
SUDS3-203ENST00000541591 Q6ZSA8 131 aa9.17□□□□□ -0.94
SUDS3-203ENST00000541591 C11orf52Q96A22 123 aa9.17□□□□□ -0.94
SUDS3-203ENST00000541591 AP1S3Q96PC3 154 aa9.17□□□□□ -0.94
SUDS3-203ENST00000541591 C1orf43Q9BWL3 253 aa9.17□□□□□ -0.94
SUDS3-203ENST00000541591 SUMO4Q6EEV6 95 aa9.16□□□□□ -0.94
SUDS3-203ENST00000541591 FER1L6-AS1Q8NA97 138 aa9.16□□□□□ -0.94
SUDS3-203ENST00000541591 TRBV20OR9-2A0A075B6H5 130 aa9.15□□□□□ -0.94
SUDS3-203ENST00000541591 IGLC6P0CF74 106 aa9.15□□□□□ -0.94
SUDS3-203ENST00000541591 GNG4P50150 75 aa9.15□□□□□ -0.94
SUDS3-203ENST00000541591 ELOBQ15370 118 aa9.15□□□□□ -0.94
SUDS3-203ENST00000541591 DAZAP1Q96EP5 407 aaKnown RBP9.15□□□□□ -0.94
SUDS3-203ENST00000541591 CHCHD7Q9BUK0 85 aa9.15□□□□□ -0.94
SUDS3-203ENST00000541591 MED9Q9NWA0 146 aa9.15□□□□□ -0.94
SUDS3-203ENST00000541591 COX11Q9Y6N1 276 aa9.15□□□□□ -0.94
SUDS3-203ENST00000541591 C19orf71A6NCJ1 209 aa9.14□□□□□ -0.95
SUDS3-203ENST00000541591 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
SUDS3-203ENST00000541591 SULT1A2P50226 295 aa9.14□□□□□ -0.95
SUDS3-203ENST00000541591 NKX2-5P52952 324 aaPredicted RBP9.14□□□□□ -0.95
SUDS3-203ENST00000541591 IGLV10-54A0A075B6I4 117 aa9.13□□□□□ -0.95
SUDS3-203ENST00000541591 TRAV1-1A0A0B4J248 108 aa9.13□□□□□ -0.95
SUDS3-203ENST00000541591 RBX1P62877 108 aa9.13□□□□□ -0.95
SUDS3-203ENST00000541591 MEF2BQ02080 365 aaPredicted RBP9.13□□□□□ -0.95
SUDS3-203ENST00000541591 Q0VG73 95 aa9.13□□□□□ -0.95
SUDS3-203ENST00000541591 LYZL1Q6UWQ5 148 aa9.13□□□□□ -0.95
SUDS3-203ENST00000541591 LINC00269Q8N2A0 174 aa9.13□□□□□ -0.95
SUDS3-203ENST00000541591 FAT3Q8TDW7 4589 aa9.13□□□□□ -0.95
SUDS3-203ENST00000541591 hCG_2014768A0A024R1R8 64 aa9.12□□□□□ -0.95
SUDS3-203ENST00000541591 M0QY20 66 aa9.12□□□□□ -0.95
SUDS3-203ENST00000541591 P01737 135 aa9.12□□□□□ -0.95
SUDS3-203ENST00000541591 BCL2P10415 239 aa9.12□□□□□ -0.95
SUDS3-203ENST00000541591 VAX2Q9UIW0 290 aa9.12□□□□□ -0.95
SUDS3-203ENST00000541591 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
SUDS3-203ENST00000541591 TRBV25-1A0A075B6N4 114 aa9.11□□□□□ -0.95
SUDS3-203ENST00000541591 IFNA1P01562 189 aa9.11□□□□□ -0.95
SUDS3-203ENST00000541591 PRSS1P07477 247 aa9.11□□□□□ -0.95
SUDS3-203ENST00000541591 RAB5CP51148 216 aa9.11□□□□□ -0.95
SUDS3-203ENST00000541591 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.11□□□□□ -0.95
SUDS3-203ENST00000541591 CIRBP-AS1Q8TBR5 109 aa9.11□□□□□ -0.95
SUDS3-203ENST00000541591 GFRA4Q9GZZ7 299 aa9.11□□□□□ -0.95
SUDS3-203ENST00000541591 RNASE7Q9H1E1 156 aaKnown RBP9.11□□□□□ -0.95
SUDS3-203ENST00000541591 TEX46H3BTG2 121 aa9.1□□□□□ -0.95
SUDS3-203ENST00000541591 PLA2G1BP04054 148 aaKnown RBP9.1□□□□□ -0.95
SUDS3-203ENST00000541591 RPS20P60866 119 aaKnown RBP9.1□□□□□ -0.95
SUDS3-203ENST00000541591 CACNG7P62955 275 aa9.1□□□□□ -0.95
SUDS3-203ENST00000541591 TCTE3Q8IZS6 198 aa9.1□□□□□ -0.95
SUDS3-203ENST00000541591 NUDT10Q8NFP7 164 aa9.1□□□□□ -0.95
SUDS3-203ENST00000541591 NUDT11Q96G61 164 aa9.1□□□□□ -0.95
SUDS3-203ENST00000541591 IGLV4-60A0A075B6I1 120 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 IGHV1-24A0A0C4DH33 117 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 J3QL48 77 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 K7EN84 100 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 PDE6DO43924 150 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 NTF3P20783 257 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 MIAQ16674 131 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 EIF5AL1Q6IS14 154 aaKnown RBP9.09□□□□□ -0.95
SUDS3-203ENST00000541591 KRTAP26-1Q6PEX3 210 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 CHAC1Q9BUX1 264 aa9.09□□□□□ -0.95
SUDS3-203ENST00000541591 RASL11AQ6T310 242 aa9.08□□□□□ -0.96
SUDS3-203ENST00000541591 SLC51BQ86UW2 128 aa9.08□□□□□ -0.96
SUDS3-203ENST00000541591 C20orf203Q8NBC4 194 aa9.08□□□□□ -0.96
SUDS3-203ENST00000541591 DPH3P1Q9H4G8 78 aa9.08□□□□□ -0.96
SUDS3-203ENST00000541591 IGKV3OR2-268A0A0C4DH90 116 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 H7C1H1 209 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 PANO1I0J062 215 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 CEBPGP53567 150 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
SUDS3-203ENST00000541591 KRTAP10-4P60372 401 aaPredicted RBP9.07□□□□□ -0.96
SUDS3-203ENST00000541591 REG3AQ06141 175 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 TWIST1Q15672 202 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 IQCJQ1A5X6 159 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 C14orf177Q52M58 125 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 TMEM97Q5BJF2 176 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 ALKAL2Q6UX46 152 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 OCC1Q8TAD7 63 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 RPL39LQ96EH5 51 aaKnown RBP9.07□□□□□ -0.96
SUDS3-203ENST00000541591 TMEM243Q9BU79 118 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 PRR34Q9NV39 138 aa9.07□□□□□ -0.96
SUDS3-203ENST00000541591 TRGC1P0CF51 173 aa9.06□□□□□ -0.96
SUDS3-203ENST00000541591 CTRLP40313 264 aa9.06□□□□□ -0.96
SUDS3-203ENST00000541591 C9orf62Q8N4C0 152 aa9.06□□□□□ -0.96
SUDS3-203ENST00000541591 RPP21Q9H633 154 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms