RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 PRADC1Q9BSG0 188 aa9.69□□□□□ -0.86
LTBR-209ENST00000541102 NAT8BQ9UHF3 227 aa9.69□□□□□ -0.86
LTBR-209ENST00000541102 TNFRSF18Q9Y5U5 241 aa9.69□□□□□ -0.86
LTBR-209ENST00000541102 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
LTBR-209ENST00000541102 MT-ND4LP03901 98 aa9.68□□□□□ -0.86
LTBR-209ENST00000541102 TRGC1P0CF51 173 aa9.68□□□□□ -0.86
LTBR-209ENST00000541102 SUMO4Q6EEV6 95 aa9.68□□□□□ -0.86
LTBR-209ENST00000541102 WFDC10BQ8IUB3 73 aa9.68□□□□□ -0.86
LTBR-209ENST00000541102 NEXN-AS1Q8NBZ9 246 aa9.68□□□□□ -0.86
LTBR-209ENST00000541102 KIAA1109Q2LD37 5005 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 TRAV9-2A0A087WT02 112 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 C16orf90A8MZG2 172 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 M0QY20 66 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 PPP1R2P9O14990 202 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 GAS8-AS1O95177 125 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 SMIM17P0DL12 118 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 SH2D6Q7Z4S9 175 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 ANAPC16Q96DE5 110 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 DPH3P1Q9H4G8 78 aa9.67□□□□□ -0.86
LTBR-209ENST00000541102 C7orf77A4D0Y5 90 aa9.66□□□□□ -0.86
LTBR-209ENST00000541102 BTF3P20290 206 aaKnown RBP9.66□□□□□ -0.86
LTBR-209ENST00000541102 MRPL54Q6P161 138 aaKnown RBP9.66□□□□□ -0.86
LTBR-209ENST00000541102 SPATA12Q7Z6I5 190 aa9.66□□□□□ -0.86
LTBR-209ENST00000541102 CLRN3Q8NCR9 226 aa9.66□□□□□ -0.86
LTBR-209ENST00000541102 RNF185Q96GF1 192 aa9.66□□□□□ -0.86
LTBR-209ENST00000541102 A0A1B0GXF2 115 aa9.65□□□□□ -0.86
LTBR-209ENST00000541102 GATD1Q8NB37 220 aa9.65□□□□□ -0.86
LTBR-209ENST00000541102 BORCS7Q96B45 105 aa9.65□□□□□ -0.86
LTBR-209ENST00000541102 APOC3P02656 99 aa9.64□□□□□ -0.87
LTBR-209ENST00000541102 CAMPP49913 170 aa9.64□□□□□ -0.87
LTBR-209ENST00000541102 UBE2D3P61077 147 aa9.64□□□□□ -0.87
LTBR-209ENST00000541102 UBE2D2P62837 147 aa9.64□□□□□ -0.87
LTBR-209ENST00000541102 RIGQ13278 110 aa9.64□□□□□ -0.87
LTBR-209ENST00000541102 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
LTBR-209ENST00000541102 AMN1Q8IY45 258 aa9.64□□□□□ -0.87
LTBR-209ENST00000541102 ATP6V0E2Q8NHE4 81 aa9.64□□□□□ -0.87
LTBR-209ENST00000541102 TMEM191AQ9H0A3 160 aa9.64□□□□□ -0.87
LTBR-209ENST00000541102 TRAV8-6A0A0B4J262 113 aa9.63□□□□□ -0.87
LTBR-209ENST00000541102 IGHV3-38A0A0C4DH36 116 aa9.63□□□□□ -0.87
LTBR-209ENST00000541102 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
LTBR-209ENST00000541102 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
LTBR-209ENST00000541102 RAB4AP20338 218 aa9.63□□□□□ -0.87
LTBR-209ENST00000541102 TIRAPP58753 221 aa9.63□□□□□ -0.87
LTBR-209ENST00000541102 OR10J3Q5JRS4 329 aa9.63□□□□□ -0.87
LTBR-209ENST00000541102 NFE4Q86UQ8 179 aa9.63□□□□□ -0.87
LTBR-209ENST00000541102 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
LTBR-209ENST00000541102 RPL39LQ96EH5 51 aaKnown RBP9.63□□□□□ -0.87
LTBR-209ENST00000541102 TRBV7-3A0A075B6L6 115 aa9.62□□□□□ -0.87
LTBR-209ENST00000541102 SMKR1H3BMG3 65 aa9.62□□□□□ -0.87
LTBR-209ENST00000541102 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
LTBR-209ENST00000541102 RASL11AQ6T310 242 aa9.62□□□□□ -0.87
LTBR-209ENST00000541102 ATRAIDQ6UW56 229 aa9.62□□□□□ -0.87
LTBR-209ENST00000541102 GTSF1LQ9H1H1 148 aa9.62□□□□□ -0.87
LTBR-209ENST00000541102 RPS10P5Q9NQ39 176 aa9.62□□□□□ -0.87
LTBR-209ENST00000541102 RPS10P46783 165 aaKnown RBP9.61□□□□□ -0.87
LTBR-209ENST00000541102 HBBP68871 147 aa9.61□□□□□ -0.87
LTBR-209ENST00000541102 RPL36AP83881 106 aaKnown RBP9.61□□□□□ -0.87
LTBR-209ENST00000541102 SMIM15Q7Z3B0 74 aa9.61□□□□□ -0.87
LTBR-209ENST00000541102 RPL36ALQ969Q0 106 aaKnown RBP9.61□□□□□ -0.87
LTBR-209ENST00000541102 CTDSP1Q9GZU7 261 aa9.61□□□□□ -0.87
LTBR-209ENST00000541102 A0A087WWC5 75 aa9.6□□□□□ -0.87
LTBR-209ENST00000541102 K7EP13 123 aa9.6□□□□□ -0.87
LTBR-209ENST00000541102 EREGO14944 169 aa9.6□□□□□ -0.87
LTBR-209ENST00000541102 NCR2O95944 276 aa9.6□□□□□ -0.87
LTBR-209ENST00000541102 RHEBQ15382 184 aa9.6□□□□□ -0.87
LTBR-209ENST00000541102 FAM104BQ5XKR9 115 aa9.6□□□□□ -0.87
LTBR-209ENST00000541102 Q8N3U1 123 aa9.6□□□□□ -0.87
LTBR-209ENST00000541102 URGCP-MRPS24S4R325 110 aa9.6□□□□□ -0.87
LTBR-209ENST00000541102 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
LTBR-209ENST00000541102 IGHV3-33P01772 117 aa9.59□□□□□ -0.87
LTBR-209ENST00000541102 IGHV3-30-3P0DP02 117 aa9.59□□□□□ -0.87
LTBR-209ENST00000541102 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
LTBR-209ENST00000541102 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.87
LTBR-209ENST00000541102 MRPL51Q4U2R6 128 aaKnown RBP9.59□□□□□ -0.87
LTBR-209ENST00000541102 LELP1Q5T871 98 aa9.59□□□□□ -0.87
LTBR-209ENST00000541102 NTM-AS1Q6ZSK4 140 aa9.59□□□□□ -0.87
LTBR-209ENST00000541102 C10orf126Q8N4M7 172 aa9.59□□□□□ -0.87
LTBR-209ENST00000541102 IMMP2LQ96T52 175 aa9.59□□□□□ -0.87
LTBR-209ENST00000541102 NIT2Q9NQR4 276 aa9.59□□□□□ -0.87
LTBR-209ENST00000541102 H7C1H1 209 aa9.58□□□□□ -0.88
LTBR-209ENST00000541102 LINC01556Q5JQF7 62 aa9.58□□□□□ -0.88
LTBR-209ENST00000541102 SVBPQ8N300 66 aa9.58□□□□□ -0.88
LTBR-209ENST00000541102 KRTAP17-1Q9BYP8 105 aa9.58□□□□□ -0.88
LTBR-209ENST00000541102 TMEM242Q9NWH2 141 aa9.58□□□□□ -0.88
LTBR-209ENST00000541102 A0A1B0GW15 77 aa9.57□□□□□ -0.88
LTBR-209ENST00000541102 ATP5L2Q7Z4Y8 100 aa9.57□□□□□ -0.88
LTBR-209ENST00000541102 NRACQ8N912 160 aa9.57□□□□□ -0.88
LTBR-209ENST00000541102 BTF3L4Q96K17 158 aa9.57□□□□□ -0.88
LTBR-209ENST00000541102 DNAJC30Q96LL9 226 aa9.57□□□□□ -0.88
LTBR-209ENST00000541102 Q9HAA7 133 aa9.57□□□□□ -0.88
LTBR-209ENST00000541102 A0A087WTM6 91 aa9.56□□□□□ -0.88
LTBR-209ENST00000541102 SNAPINO95295 136 aa9.56□□□□□ -0.88
LTBR-209ENST00000541102 NDUFA5Q16718 116 aa9.56□□□□□ -0.88
LTBR-209ENST00000541102 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
LTBR-209ENST00000541102 IBA57-AS1B1ANH7 110 aa9.55□□□□□ -0.88
LTBR-209ENST00000541102 PSCAO43653 123 aa9.55□□□□□ -0.88
LTBR-209ENST00000541102 TMEM136Q6ZRR5 245 aa9.55□□□□□ -0.88
LTBR-209ENST00000541102 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
LTBR-209ENST00000541102 LRP1BQ9NZR2 4599 aa9.54□□□□□ -0.88
LTBR-209ENST00000541102 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms