RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 S100A12P80511 92 aa8.79□□□□□ -1
AP003559.1-201ENST00000540906 PIK3CD-AS1Q5SR53 167 aa8.79□□□□□ -1
AP003559.1-201ENST00000540906 C1QTNF4Q9BXJ3 329 aa8.79□□□□□ -1
AP003559.1-201ENST00000540906 MAP1LC3CQ9BXW4 147 aa8.79□□□□□ -1
AP003559.1-201ENST00000540906 KIR2DL5BA0A0G2JN68 375 aa8.78□□□□□ -1
AP003559.1-201ENST00000540906 KIR2DL5BA0A0G2JPC4 375 aa8.78□□□□□ -1
AP003559.1-201ENST00000540906 IGHV3-53P01767 116 aa8.78□□□□□ -1
AP003559.1-201ENST00000540906 KIR2DL5AQ8N109 375 aa8.78□□□□□ -1
AP003559.1-201ENST00000540906 IFI27L1Q96BM0 104 aa8.78□□□□□ -1
AP003559.1-201ENST00000540906 ZNF479Q96JC4 524 aa8.78□□□□□ -1
AP003559.1-201ENST00000540906 X6R8D5 127 aa8.78□□□□□ -1
AP003559.1-201ENST00000540906 PKIAP61925 76 aa8.77□□□□□ -1
AP003559.1-201ENST00000540906 RPL32P62910 135 aaKnown RBP8.77□□□□□ -1
AP003559.1-201ENST00000540906 LINC01545Q5VT33 79 aa8.77□□□□□ -1
AP003559.1-201ENST00000540906 SHISA2Q6UWI4 295 aa8.77□□□□□ -1
AP003559.1-201ENST00000540906 PET117Q6UWS5 81 aa8.77□□□□□ -1
AP003559.1-201ENST00000540906 NUDT3O95989 172 aa8.77□□□□□ -1.01
AP003559.1-201ENST00000540906 RRN3P1Q2M238 152 aa8.77□□□□□ -1.01
AP003559.1-201ENST00000540906 C16orf74Q96GX8 76 aa8.77□□□□□ -1.01
AP003559.1-201ENST00000540906 VAMP8Q9BV40 100 aa8.77□□□□□ -1.01
AP003559.1-201ENST00000540906 EDA2RQ9HAV5 297 aa8.77□□□□□ -1.01
AP003559.1-201ENST00000540906 hDV102S1A0JD36 115 aa8.76□□□□□ -1.01
AP003559.1-201ENST00000540906 GAGE12BA1L429 117 aa8.76□□□□□ -1.01
AP003559.1-201ENST00000540906 GAGE7O76087 117 aa8.76□□□□□ -1.01
AP003559.1-201ENST00000540906 PPP1R17O96001 155 aa8.76□□□□□ -1.01
AP003559.1-201ENST00000540906 GAGE12FP0CL80 117 aa8.76□□□□□ -1.01
AP003559.1-201ENST00000540906 GAGE12GP0CL81 117 aa8.76□□□□□ -1.01
AP003559.1-201ENST00000540906 GAGE12IP0CL82 117 aa8.76□□□□□ -1.01
AP003559.1-201ENST00000540906 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
AP003559.1-201ENST00000540906 PKD1L1Q8TDX9 2849 aa8.76□□□□□ -1.01
AP003559.1-201ENST00000540906 TRBV27A0A0K0K1C4 114 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 TSHBP01222 138 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 EMP1P54849 157 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 DEFB135Q30KP9 77 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 ZFP2Q6ZN57 461 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 NEXN-AS1Q8NBZ9 246 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 DKK2Q9UBU2 259 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 TP73-AS1Q9UF72 201 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 NBEAL2Q6ZNJ1 2754 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 VCYO14598 125 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 IGHV4-30-4P0DP06 118 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 RPL39P62891 51 aaKnown RBP8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 SPATA45Q537H7 98 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 ORMDL2Q53FV1 153 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 C2orf66Q6UXQ4 117 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 OR4C5Q8NGB2 326 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 TOMM6Q96B49 74 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 OVOL2Q9BRP0 275 aa8.75□□□□□ -1.01
AP003559.1-201ENST00000540906 TRAV9-2A0A087WT02 112 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 RHODO00212 210 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 IGHV3-38A0A0C4DH36 116 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 G3V4G9 280 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 TSTD3H0UI37 97 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 DEFB4AO15263 64 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 DDTP30046 118 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 ODF1Q14990 250 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 ZC2HC1BQ5TFG8 222 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 LGALS9CQ6DKI2 356 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 TP53TG1Q9Y2A0 90 aa8.73□□□□□ -1.01
AP003559.1-201ENST00000540906 C20orf202A1L168 122 aa8.72□□□□□ -1.01
AP003559.1-201ENST00000540906 EGFEM1PQ0D2K5 195 aa8.72□□□□□ -1.01
AP003559.1-201ENST00000540906 KIR2DL5BQ8NHK3 375 aa8.72□□□□□ -1.01
AP003559.1-201ENST00000540906 SCGB3A1Q96QR1 104 aa8.72□□□□□ -1.01
AP003559.1-201ENST00000540906 NDUFAF3Q9BU61 184 aa8.72□□□□□ -1.01
AP003559.1-201ENST00000540906 H7C1H1 209 aa8.71□□□□□ -1.01
AP003559.1-201ENST00000540906 I3L3M4 83 aa8.71□□□□□ -1.01
AP003559.1-201ENST00000540906 K7EMI3 77 aa8.71□□□□□ -1.01
AP003559.1-201ENST00000540906 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.01
AP003559.1-201ENST00000540906 KIR2DL4Q99706 377 aa8.71□□□□□ -1.01
AP003559.1-201ENST00000540906 LOC100131303A0A0U1RQF7 123 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 ATP5LO75964 103 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 PRSS1P07477 247 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 TCTAP57738 103 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 TNFRSF18Q9Y5U5 241 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 TRGV2A0A075B6R0 118 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 IGIPA6NJ69 53 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 IGLC3P0DOY3 106 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 APOC4P55056 127 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 KRTAP21-3Q3LHN1 58 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 ANKRD39Q53RE8 183 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 SLC25A29Q8N8R3 303 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 BAALCQ8WXS3 180 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 C14orf144Q96I85 54 aa8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 OPRPNQ99935 248 aaPredicted RBP8.7□□□□□ -1.02
AP003559.1-201ENST00000540906 IGHV4-28A0A0C4DH34 117 aa8.69□□□□□ -1.02
AP003559.1-201ENST00000540906 K7EQD1 137 aa8.69□□□□□ -1.02
AP003559.1-201ENST00000540906 DEFB130BP0DP73 79 aa8.69□□□□□ -1.02
AP003559.1-201ENST00000540906 DEFB130AP0DP74 79 aa8.69□□□□□ -1.02
AP003559.1-201ENST00000540906 STPG4Q8N801 248 aa8.69□□□□□ -1.02
AP003559.1-201ENST00000540906 OR11H2Q8NH07 326 aa8.69□□□□□ -1.02
AP003559.1-201ENST00000540906 ZMAT4Q9H898 229 aa8.69□□□□□ -1.02
AP003559.1-201ENST00000540906 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
AP003559.1-201ENST00000540906 CYSLTR1Q9Y271 337 aa8.69□□□□□ -1.02
AP003559.1-201ENST00000540906 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.68□□□□□ -1.02
AP003559.1-201ENST00000540906 FHL2Q14192 279 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms