RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SS18Q15532 418 aa8.36□□□□□ -1.07
PBX1-212ENST00000540236 IL17DQ8TAD2 202 aa8.36□□□□□ -1.07
PBX1-212ENST00000540236 FSTL3O95633 263 aa8.36□□□□□ -1.07
PBX1-212ENST00000540236 PRR9Q5T870 116 aa8.36□□□□□ -1.07
PBX1-212ENST00000540236 SNRPD3P62318 126 aaKnown RBP8.35□□□□□ -1.07
PBX1-212ENST00000540236 DNAJC13O75165 2243 aa8.35□□□□□ -1.07
PBX1-212ENST00000540236 IGHV7-4-1A0A0J9YVY3 117 aa8.35□□□□□ -1.07
PBX1-212ENST00000540236 A0A1W2PRX2 142 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 POM121L12Q8N7R1 296 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 SPANXCQ9NY87 97 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 PRO0628Q9UI54 55 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 IGHV4-28A0A0C4DH34 117 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 PROK1P58294 105 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 RMI2Q96E14 147 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 C20orf173Q96LM9 149 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 PCSK5Q92824 1860 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 COX7A2LO14548 114 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 PRR4Q16378 134 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 C22orf34Q6ZV56 151 aa8.34□□□□□ -1.07
PBX1-212ENST00000540236 COX7B2Q8TF08 81 aa8.34□□□□□ -1.08
PBX1-212ENST00000540236 PRORYQ9H606 182 aa8.33□□□□□ -1.08
PBX1-212ENST00000540236 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
PBX1-212ENST00000540236 NANOS2P60321 138 aaKnown RBP8.33□□□□□ -1.08
PBX1-212ENST00000540236 RNF138Q8WVD3 245 aa8.33□□□□□ -1.08
PBX1-212ENST00000540236 A0A0G2JNJ9 132 aa8.33□□□□□ -1.08
PBX1-212ENST00000540236 TRBV6-1A0A0K0K1D8 114 aa8.33□□□□□ -1.08
PBX1-212ENST00000540236 Q9UFV3 132 aa8.33□□□□□ -1.08
PBX1-212ENST00000540236 CD59P13987 128 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 LINC00336Q6ZUF6 198 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 C2orf48Q96LS8 159 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 AHCTF1Q8WYP5 2266 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 IGHV1-58A0A0C4DH39 117 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 IGLV2-18A0A075B6J9 118 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 LRP4O75096 1905 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 CTSGP08311 255 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 RHPN1-AS1Q9BWJ2 59 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 SPEGQ15772 3267 aa8.32□□□□□ -1.08
PBX1-212ENST00000540236 IGLV3-9A0A075B6K5 115 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 TRBV7-7A0A0K0K1E9 115 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 LHBP01229 141 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 TRAV13-2A0A0B4J235 113 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 UBE2E2Q96LR5 201 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 SND1-IT1Q9HBX3 110 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 FAM19A1Q7Z5A9 133 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 IMUPQ9GZP8 106 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 CRYGDP07320 174 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 CEP250Q9BV73 2442 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 FAM186AA6NE01 2351 aa8.31□□□□□ -1.08
PBX1-212ENST00000540236 A0A087WYN8 130 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 LINC01619G3V211 115 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 C9orf139Q6ZV77 190 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 MRPL55Q7Z7F7 128 aaKnown RBP8.3□□□□□ -1.08
PBX1-212ENST00000540236 OVOL3O00110 214 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 OVOL2Q9BRP0 275 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 PRM2P04554 102 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 ARHGAP32A7KAX9 2087 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 TRGV1A0A0A0MS02 117 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 DYNLRB2Q8TF09 96 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 LINC00474Q9P2X8 69 aa8.3□□□□□ -1.08
PBX1-212ENST00000540236 CLPSL1A2RUU4 121 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 PSPHP1O15172 72 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 C6orf226Q5I0X4 101 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 PLXNB1O43157 2135 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 IGHV1-69DA0A0B4J2H0 117 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 LY6G6EA0A0G2JKS1 128 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 BUB3O43684 328 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 U3KQA8 63 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 PTPRBP23467 1997 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 BRD3OSQ6XYD6 125 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 TSHBP01222 138 aa8.29□□□□□ -1.08
PBX1-212ENST00000540236 FHL2Q14192 279 aa8.28□□□□□ -1.08
PBX1-212ENST00000540236 INSP01308 110 aa8.28□□□□□ -1.08
PBX1-212ENST00000540236 TIMM17AQ99595 171 aa8.28□□□□□ -1.08
PBX1-212ENST00000540236 TMEM86BQ8N661 226 aa8.28□□□□□ -1.08
PBX1-212ENST00000540236 MIR7-3HGQ8N6C7 128 aa8.28□□□□□ -1.08
PBX1-212ENST00000540236 LINC00308Q8TCZ7 52 aa8.28□□□□□ -1.08
PBX1-212ENST00000540236 MUC22E2RYF6 1773 aaPredicted RBP8.28□□□□□ -1.08
PBX1-212ENST00000540236 IGLV4-3A0A075B6K6 122 aa8.28□□□□□ -1.08
PBX1-212ENST00000540236 GATA4P43694 442 aa8.27□□□□□ -1.08
PBX1-212ENST00000540236 DEFB124Q8NES8 71 aa8.27□□□□□ -1.08
PBX1-212ENST00000540236 CYSTM1Q9H1C7 97 aa8.27□□□□□ -1.08
PBX1-212ENST00000540236 SERP1Q9Y6X1 66 aa8.27□□□□□ -1.08
PBX1-212ENST00000540236 COL6A3P12111 3177 aa8.27□□□□□ -1.09
PBX1-212ENST00000540236 A0A087WZ39 114 aa8.27□□□□□ -1.09
PBX1-212ENST00000540236 XCL1P47992 114 aa8.27□□□□□ -1.09
PBX1-212ENST00000540236 LINC00311Q8N616 119 aa8.27□□□□□ -1.09
PBX1-212ENST00000540236 XCL2Q9UBD3 114 aa8.27□□□□□ -1.09
PBX1-212ENST00000540236 FAM240AA0A1B0GVK7 77 aa8.27□□□□□ -1.09
PBX1-212ENST00000540236 RAI1Q7Z5J4 1906 aaPredicted RBP8.27□□□□□ -1.09
PBX1-212ENST00000540236 EBI3Q14213 229 aa8.27□□□□□ -1.09
PBX1-212ENST00000540236 A0A096LPF7 62 aa8.26□□□□□ -1.09
PBX1-212ENST00000540236 IGHG3P01860 377 aa8.26□□□□□ -1.09
PBX1-212ENST00000540236 SBSPONQ8IVN8 264 aa8.26□□□□□ -1.09
PBX1-212ENST00000540236 RNASE6Q93091 150 aaKnown RBP8.26□□□□□ -1.09
PBX1-212ENST00000540236 LINC00846Q9NV44 126 aa8.26□□□□□ -1.09
PBX1-212ENST00000540236 CDKN2A-AS1Q9UH64 79 aa8.26□□□□□ -1.09
PBX1-212ENST00000540236 COX6B1P14854 86 aa8.26□□□□□ -1.09
PBX1-212ENST00000540236 DEFB105AQ8NG35 78 aa8.26□□□□□ -1.09
PBX1-212ENST00000540236 TRGV2A0A075B6R0 118 aa8.26□□□□□ -1.09
PBX1-212ENST00000540236 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms