RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 Q6ZNX1 250 aa12.58□□□□□ -0.4
TNFRSF1A-212ENST00000539372 AP1S3Q96PC3 154 aa12.58□□□□□ -0.4
TNFRSF1A-212ENST00000539372 CHCHD7Q9BUK0 85 aa12.58□□□□□ -0.4
TNFRSF1A-212ENST00000539372 MED9Q9NWA0 146 aa12.58□□□□□ -0.4
TNFRSF1A-212ENST00000539372 KIF25-AS1Q9Y6Z4 181 aa12.58□□□□□ -0.4
TNFRSF1A-212ENST00000539372 PDE6DO43924 150 aa12.57□□□□□ -0.4
TNFRSF1A-212ENST00000539372 IFNA1P01562 189 aa12.57□□□□□ -0.4
TNFRSF1A-212ENST00000539372 C1QBP02746 253 aa12.57□□□□□ -0.4
TNFRSF1A-212ENST00000539372 INAFM2P0DMQ5 153 aa12.57□□□□□ -0.4
TNFRSF1A-212ENST00000539372 ELOBQ15370 118 aa12.57□□□□□ -0.4
TNFRSF1A-212ENST00000539372 SLC51BQ86UW2 128 aa12.57□□□□□ -0.4
TNFRSF1A-212ENST00000539372 FER1L6-AS1Q8NA97 138 aa12.57□□□□□ -0.4
TNFRSF1A-212ENST00000539372 C19orf71A6NCJ1 209 aa12.56□□□□□ -0.4
TNFRSF1A-212ENST00000539372 MGPP08493 103 aa12.56□□□□□ -0.4
TNFRSF1A-212ENST00000539372 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
TNFRSF1A-212ENST00000539372 BCL2P10415 239 aa12.56□□□□□ -0.4
TNFRSF1A-212ENST00000539372 RPS20P60866 119 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-212ENST00000539372 C15orf54Q8N8G6 183 aa12.56□□□□□ -0.4
TNFRSF1A-212ENST00000539372 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-212ENST00000539372 CHCHD5Q9BSY4 110 aa12.56□□□□□ -0.4
TNFRSF1A-212ENST00000539372 TRBV20OR9-2A0A075B6H5 130 aa12.55□□□□□ -0.4
TNFRSF1A-212ENST00000539372 P01737 135 aa12.55□□□□□ -0.4
TNFRSF1A-212ENST00000539372 MPV17L2Q567V2 206 aa12.55□□□□□ -0.4
TNFRSF1A-212ENST00000539372 LINC01620Q4KN68 170 aa12.54□□□□□ -0.4
TNFRSF1A-212ENST00000539372 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
TNFRSF1A-212ENST00000539372 SMIM12Q96EX1 92 aa12.54□□□□□ -0.4
TNFRSF1A-212ENST00000539372 VAX2Q9UIW0 290 aa12.54□□□□□ -0.4
TNFRSF1A-212ENST00000539372 ANGP03950 147 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-212ENST00000539372 Q0VG73 95 aa12.53□□□□□ -0.4
TNFRSF1A-212ENST00000539372 ENHOQ6UWT2 76 aa12.53□□□□□ -0.4
TNFRSF1A-212ENST00000539372 Q8N976 141 aa12.53□□□□□ -0.4
TNFRSF1A-212ENST00000539372 XKRY2A2RUG3 117 aa12.52□□□□□ -0.41
TNFRSF1A-212ENST00000539372 FAM229AH3BQW9 127 aa12.52□□□□□ -0.41
TNFRSF1A-212ENST00000539372 CRPP02741 224 aa12.52□□□□□ -0.41
TNFRSF1A-212ENST00000539372 CACNG7P62955 275 aa12.52□□□□□ -0.41
TNFRSF1A-212ENST00000539372 ATRAIDQ6UW56 229 aa12.52□□□□□ -0.41
TNFRSF1A-212ENST00000539372 hCG_2014768A0A024R1R8 64 aa12.51□□□□□ -0.41
TNFRSF1A-212ENST00000539372 M0QY20 66 aa12.51□□□□□ -0.41
TNFRSF1A-212ENST00000539372 SUMO4Q6EEV6 95 aa12.51□□□□□ -0.41
TNFRSF1A-212ENST00000539372 LYZL1Q6UWQ5 148 aa12.51□□□□□ -0.41
TNFRSF1A-212ENST00000539372 AKAP14Q86UN6 197 aa12.51□□□□□ -0.41
TNFRSF1A-212ENST00000539372 C1orf43Q9BWL3 253 aa12.51□□□□□ -0.41
TNFRSF1A-212ENST00000539372 BIN3Q9NQY0 253 aa12.51□□□□□ -0.41
TNFRSF1A-212ENST00000539372 VPS13BQ7Z7G8 4022 aa12.51□□□□□ -0.41
TNFRSF1A-212ENST00000539372 F2Z2F3 143 aa12.5□□□□□ -0.41
TNFRSF1A-212ENST00000539372 GAGE6Q13070 117 aa12.5□□□□□ -0.41
TNFRSF1A-212ENST00000539372 TMEM97Q5BJF2 176 aa12.5□□□□□ -0.41
TNFRSF1A-212ENST00000539372 C9orf62Q8N4C0 152 aa12.5□□□□□ -0.41
TNFRSF1A-212ENST00000539372 DNAH8Q96JB1 4490 aa12.5□□□□□ -0.41
TNFRSF1A-212ENST00000539372 PKIAP61925 76 aa12.49□□□□□ -0.41
TNFRSF1A-212ENST00000539372 Q6ZSA8 131 aa12.49□□□□□ -0.41
TNFRSF1A-212ENST00000539372 NUDT10Q8NFP7 164 aa12.49□□□□□ -0.41
TNFRSF1A-212ENST00000539372 NUDT11Q96G61 164 aa12.49□□□□□ -0.41
TNFRSF1A-212ENST00000539372 TRBV25-1A0A075B6N4 114 aa12.48□□□□□ -0.41
TNFRSF1A-212ENST00000539372 H7C1H1 209 aa12.48□□□□□ -0.41
TNFRSF1A-212ENST00000539372 NTF3P20783 257 aa12.48□□□□□ -0.41
TNFRSF1A-212ENST00000539372 TAGLN2P37802 199 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-212ENST00000539372 NKX2-5P52952 324 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1A-212ENST00000539372 CLPSL2Q6UWE3 100 aa12.48□□□□□ -0.41
TNFRSF1A-212ENST00000539372 RNASE7Q9H1E1 156 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-212ENST00000539372 TRGC1P0CF51 173 aa12.47□□□□□ -0.41
TNFRSF1A-212ENST00000539372 RBX1P62877 108 aa12.47□□□□□ -0.41
TNFRSF1A-212ENST00000539372 ALKAL2Q6UX46 152 aa12.47□□□□□ -0.41
TNFRSF1A-212ENST00000539372 IGHV1-24A0A0C4DH33 117 aa12.46□□□□□ -0.41
TNFRSF1A-212ENST00000539372 K7EN84 100 aa12.46□□□□□ -0.41
TNFRSF1A-212ENST00000539372 HLA-DQA1P01909 254 aa12.46□□□□□ -0.41
TNFRSF1A-212ENST00000539372 RASL11AQ6T310 242 aa12.46□□□□□ -0.41
TNFRSF1A-212ENST00000539372 OCC1Q8TAD7 63 aa12.46□□□□□ -0.41
TNFRSF1A-212ENST00000539372 DEFB104AQ8WTQ1 72 aa12.46□□□□□ -0.41
TNFRSF1A-212ENST00000539372 DPH3P1Q9H4G8 78 aa12.46□□□□□ -0.41
TNFRSF1A-212ENST00000539372 RPP21Q9H633 154 aaKnown RBP12.46□□□□□ -0.41
TNFRSF1A-212ENST00000539372 CTRLP40313 264 aa12.45□□□□□ -0.42
TNFRSF1A-212ENST00000539372 MIAQ16674 131 aa12.45□□□□□ -0.42
TNFRSF1A-212ENST00000539372 IQCJQ1A5X6 159 aa12.45□□□□□ -0.42
TNFRSF1A-212ENST00000539372 LINC00269Q8N2A0 174 aa12.45□□□□□ -0.42
TNFRSF1A-212ENST00000539372 TWIST1Q15672 202 aa12.44□□□□□ -0.42
TNFRSF1A-212ENST00000539372 USP17L23D6RBM5 183 aa12.43□□□□□ -0.42
TNFRSF1A-212ENST00000539372 C14orf177Q52M58 125 aa12.43□□□□□ -0.42
TNFRSF1A-212ENST00000539372 WDR73Q6P4I2 378 aa12.43□□□□□ -0.42
TNFRSF1A-212ENST00000539372 LINC00528Q8N1L1 170 aa12.43□□□□□ -0.42
TNFRSF1A-212ENST00000539372 PRR34Q9NV39 138 aa12.43□□□□□ -0.42
TNFRSF1A-212ENST00000539372 SRRM2Q9UQ35 2752 aaKnown RBP12.42□□□□□ -0.42
TNFRSF1A-212ENST00000539372 BLOC1S1P78537 153 aa12.42□□□□□ -0.42
TNFRSF1A-212ENST00000539372 SCXQ7RTU7 201 aa12.42□□□□□ -0.42
TNFRSF1A-212ENST00000539372 TMEM243Q9BU79 118 aa12.42□□□□□ -0.42
TNFRSF1A-212ENST00000539372 NIT2Q9NQR4 276 aa12.42□□□□□ -0.42
TNFRSF1A-212ENST00000539372 FLG2Q5D862 2391 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-212ENST00000539372 CEBPGP53567 150 aa12.41□□□□□ -0.42
TNFRSF1A-212ENST00000539372 GTSF1Q8WW33 167 aa12.41□□□□□ -0.42
TNFRSF1A-212ENST00000539372 CNFNQ9BYD5 112 aa12.41□□□□□ -0.42
TNFRSF1A-212ENST00000539372 TRAV26-2A0A0B4J265 109 aa12.4□□□□□ -0.42
TNFRSF1A-212ENST00000539372 KRTAP26-1Q6PEX3 210 aa12.4□□□□□ -0.42
TNFRSF1A-212ENST00000539372 IGLV10-54A0A075B6I4 117 aa12.39□□□□□ -0.43
TNFRSF1A-212ENST00000539372 TMEM250H0YL14 139 aa12.39□□□□□ -0.43
TNFRSF1A-212ENST00000539372 PLA2G1BP04054 148 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-212ENST00000539372 PRSS1P07477 247 aa12.39□□□□□ -0.43
TNFRSF1A-212ENST00000539372 REG3AQ06141 175 aa12.39□□□□□ -0.43
TNFRSF1A-212ENST00000539372 GATD1Q8NB37 220 aa12.39□□□□□ -0.43
TNFRSF1A-212ENST00000539372 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
TNFRSF1A-212ENST00000539372 CHAC1Q9BUX1 264 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms