RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ANK2Q01484 3957 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 TRBV10-3A0A0K0K1G6 114 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 FAM92AA1XBS5 289 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 TMEM14DPA8MWL7 114 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 APOC4-APOC2K7ER74 178 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 CCL8P80075 99 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 INSL4Q14641 139 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 MEIG1Q5JSS6 88 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 ZNF818PQ6ZRF7 136 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 PLXNA2O75051 1894 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 PIEZO1Q92508 2521 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 DAPK1P53355 1430 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 KIF13AQ9H1H9 1805 aa0.2□□□□□ -2.38
CCDC7-209ENST00000539197 SSC5DA1L4H1 1573 aa0.19□□□□□ -2.38
CCDC7-209ENST00000539197 SYNE1Q8NF91 8797 aaKnown RBP0.19□□□□□ -2.38
CCDC7-209ENST00000539197 GRIN2AQ12879 1464 aa0.19□□□□□ -2.38
CCDC7-209ENST00000539197 TRAV1-2A0A0B4J238 106 aa0.19□□□□□ -2.38
CCDC7-209ENST00000539197 HCG22E2RYF7 251 aa0.19□□□□□ -2.38
CCDC7-209ENST00000539197 K7EP13 123 aa0.19□□□□□ -2.38
CCDC7-209ENST00000539197 GCHFRP30047 84 aa0.19□□□□□ -2.38
CCDC7-209ENST00000539197 TNCP24821 2201 aa0.19□□□□□ -2.38
CCDC7-209ENST00000539197 MED13LQ71F56 2210 aa0.19□□□□□ -2.38
CCDC7-209ENST00000539197 DSTQ03001 7570 aaKnown RBP0.19□□□□□ -2.38
CCDC7-209ENST00000539197 ZNF142P52746 1687 aaPredicted RBP0.18□□□□□ -2.38
CCDC7-209ENST00000539197 ZNF518AQ6AHZ1 1483 aa0.18□□□□□ -2.38
CCDC7-209ENST00000539197 KDM6BO15054 1643 aa0.18□□□□□ -2.38
CCDC7-209ENST00000539197 TTC28Q96AY4 2481 aa0.18□□□□□ -2.38
CCDC7-209ENST00000539197 LOC100130705A0A1B0GUX0 176 aa0.18□□□□□ -2.38
CCDC7-209ENST00000539197 COX6A2Q02221 97 aa0.18□□□□□ -2.38
CCDC7-209ENST00000539197 SNRNP25Q9BV90 132 aaKnown RBP0.18□□□□□ -2.38
CCDC7-209ENST00000539197 MUC22E2RYF6 1773 aaPredicted RBP0.18□□□□□ -2.38
CCDC7-209ENST00000539197 CASKIN1Q8WXD9 1431 aa0.18□□□□□ -2.38
CCDC7-209ENST00000539197 F5P12259 2224 aa0.18□□□□□ -2.38
CCDC7-209ENST00000539197 ZMYM4Q5VZL5 1548 aa0.18□□□□□ -2.38
CCDC7-209ENST00000539197 VIRMAQ69YN4 1812 aaKnown RBP0.17□□□□□ -2.38
CCDC7-209ENST00000539197 TRAV13-2A0A0B4J235 113 aa0.17□□□□□ -2.38
CCDC7-209ENST00000539197 G3V318 75 aa0.17□□□□□ -2.38
CCDC7-209ENST00000539197 SIX6O95475 246 aa0.17□□□□□ -2.38
CCDC7-209ENST00000539197 MYOM3Q5VTT5 1437 aa0.17□□□□□ -2.38
CCDC7-209ENST00000539197 Q8N8P6 123 aa0.17□□□□□ -2.38
CCDC7-209ENST00000539197 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.17□□□□□ -2.38
CCDC7-209ENST00000539197 RERGLQ9H628 205 aa0.17□□□□□ -2.38
CCDC7-209ENST00000539197 SCP2D1Q9UJQ7 156 aa0.17□□□□□ -2.38
CCDC7-209ENST00000539197 SERP1Q9Y6X1 66 aa0.17□□□□□ -2.38
CCDC7-209ENST00000539197 TPRP12270 2363 aaKnown RBP0.17□□□□□ -2.38
CCDC7-209ENST00000539197 IFT140Q96RY7 1462 aa0.16□□□□□ -2.38
CCDC7-209ENST00000539197 CACNA1HO95180 2353 aa0.16□□□□□ -2.38
CCDC7-209ENST00000539197 PPP1R17O96001 155 aa0.16□□□□□ -2.38
CCDC7-209ENST00000539197 C10orf128Q5T292 105 aa0.16□□□□□ -2.38
CCDC7-209ENST00000539197 SSBP3-AS1Q7Z2R9 100 aa0.16□□□□□ -2.38
CCDC7-209ENST00000539197 COPS9Q8WXC6 57 aa0.16□□□□□ -2.38
CCDC7-209ENST00000539197 GOLGA3Q08378 1498 aa0.16□□□□□ -2.38
CCDC7-209ENST00000539197 TNS1Q9HBL0 1735 aaKnown RBP0.16□□□□□ -2.38
CCDC7-209ENST00000539197 KIAA0100Q14667 2235 aaKnown RBP0.15□□□□□ -2.38
CCDC7-209ENST00000539197 ABCA12Q86UK0 2595 aa0.15□□□□□ -2.38
CCDC7-209ENST00000539197 MYH13Q9UKX3 1938 aa0.15□□□□□ -2.39
CCDC7-209ENST00000539197 SPAARA0A1B0GVQ0 90 aa0.15□□□□□ -2.39
CCDC7-209ENST00000539197 ZNF815PA8K554 130 aa0.15□□□□□ -2.39
CCDC7-209ENST00000539197 Q5BKY6 102 aa0.15□□□□□ -2.39
CCDC7-209ENST00000539197 Q6AWC8 147 aa0.15□□□□□ -2.39
CCDC7-209ENST00000539197 BAGE3Q86Y29 109 aa0.15□□□□□ -2.39
CCDC7-209ENST00000539197 UBE2DNLQ8IWF7 75 aa0.15□□□□□ -2.39
CCDC7-209ENST00000539197 NAA60Q9H7X0 242 aa0.15□□□□□ -2.39
CCDC7-209ENST00000539197 NRXN2Q9P2S2 1712 aa0.15□□□□□ -2.39
CCDC7-209ENST00000539197 NEBP20929 6669 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 MIF4GDA9UHW6 222 aaKnown RBP0.14□□□□□ -2.39
CCDC7-209ENST00000539197 M0R135 149 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 SPINK1P00995 79 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 SMIM6P0DI80 62 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 CCL18P55774 89 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 Q56UQ5 140 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 CFAP126Q5VTH2 177 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 TTC9CQ8N5M4 171 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 AQP10Q96PS8 301 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 PHIPQ8WWQ0 1821 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 CFTRP13569 1480 aa0.14□□□□□ -2.39
CCDC7-209ENST00000539197 AKAP11Q9UKA4 1901 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 PIGBOS1A0A0B4J2F0 54 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 BTG2P78543 158 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 Q5VV11 94 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 C12orf73Q69YU5 71 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 RPL13AP3Q6NVV1 102 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 C1orf54Q8WWF1 131 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 NPVFQ9HCQ7 196 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 ROCK2O75116 1388 aaKnown RBP0.13□□□□□ -2.39
CCDC7-209ENST00000539197 MBD5Q9P267 1494 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 LAMC3Q9Y6N6 1575 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 LAMB1P07942 1786 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 MYO7AQ13402 2215 aa0.13□□□□□ -2.39
CCDC7-209ENST00000539197 MAP2P11137 1827 aaKnown RBP0.13□□□□□ -2.39
CCDC7-209ENST00000539197 POLQO75417 2590 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 ZFYVE26Q68DK2 2539 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 LRP1Q07954 4544 aaKnown RBP0.12□□□□□ -2.39
CCDC7-209ENST00000539197 A0A1B0GV90 55 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 AKAIN1P0CW23 69 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 FGF7P21781 194 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 SPAG11BQ08648 103 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 CATR1Q13166 79 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 SPAG11AQ6PDA7 123 aa0.12□□□□□ -2.39
CCDC7-209ENST00000539197 FAM213BQ8TBF2 198 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms