RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 F2Z2F3 143 aa11.13□□□□□ -0.63
ATL3-202ENST00000535789 WDR73Q6P4I2 378 aa11.13□□□□□ -0.63
ATL3-202ENST00000535789 Q9UF83 564 aa11.13□□□□□ -0.63
ATL3-202ENST00000535789 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
ATL3-202ENST00000535789 TGIF2-C20orf24A0A0A6YYL0 155 aa11.12□□□□□ -0.63
ATL3-202ENST00000535789 A0A1B0GUT8 65 aa11.12□□□□□ -0.63
ATL3-202ENST00000535789 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
ATL3-202ENST00000535789 LINC00694P0DN24 101 aa11.12□□□□□ -0.63
ATL3-202ENST00000535789 BTF3L4Q96K17 158 aa11.12□□□□□ -0.63
ATL3-202ENST00000535789 TRBV6-4A0A1B0GX49 114 aa11.11□□□□□ -0.63
ATL3-202ENST00000535789 CACNG7P62955 275 aa11.11□□□□□ -0.63
ATL3-202ENST00000535789 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
ATL3-202ENST00000535789 MRPL54Q6P161 138 aaKnown RBP11.11□□□□□ -0.63
ATL3-202ENST00000535789 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
ATL3-202ENST00000535789 PHLDA3Q9Y5J5 127 aa11.11□□□□□ -0.63
ATL3-202ENST00000535789 RHOHQ15669 191 aa11.1□□□□□ -0.63
ATL3-202ENST00000535789 PIK3CD-AS1Q5SR53 167 aa11.1□□□□□ -0.63
ATL3-202ENST00000535789 ZFP82Q8N141 532 aa11.1□□□□□ -0.63
ATL3-202ENST00000535789 KRTAP17-1Q9BYP8 105 aa11.1□□□□□ -0.63
ATL3-202ENST00000535789 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
ATL3-202ENST00000535789 COLCA2A8K830 154 aa11.09□□□□□ -0.63
ATL3-202ENST00000535789 DNAH10OSP0CZ25 163 aa11.09□□□□□ -0.63
ATL3-202ENST00000535789 NTF3P20783 257 aa11.09□□□□□ -0.63
ATL3-202ENST00000535789 KRTAP10-2P60368 255 aa11.09□□□□□ -0.63
ATL3-202ENST00000535789 RIGQ13278 110 aa11.09□□□□□ -0.63
ATL3-202ENST00000535789 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
ATL3-202ENST00000535789 BORCS7Q96B45 105 aa11.09□□□□□ -0.63
ATL3-202ENST00000535789 ABCA13Q86UQ4 5058 aa11.08□□□□□ -0.64
ATL3-202ENST00000535789 A8MWV9 139 aa11.08□□□□□ -0.64
ATL3-202ENST00000535789 M0R381 172 aa11.08□□□□□ -0.64
ATL3-202ENST00000535789 CIDEAO60543 219 aa11.08□□□□□ -0.64
ATL3-202ENST00000535789 BTF3P20290 206 aaKnown RBP11.08□□□□□ -0.64
ATL3-202ENST00000535789 TIRAPP58753 221 aa11.08□□□□□ -0.64
ATL3-202ENST00000535789 SSTP61278 116 aa11.08□□□□□ -0.64
ATL3-202ENST00000535789 HBBP68871 147 aa11.08□□□□□ -0.64
ATL3-202ENST00000535789 ZFP2Q6ZN57 461 aa11.08□□□□□ -0.64
ATL3-202ENST00000535789 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
ATL3-202ENST00000535789 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
ATL3-202ENST00000535789 A0A1B0GW15 77 aa11.07□□□□□ -0.64
ATL3-202ENST00000535789 TWIST1Q15672 202 aa11.07□□□□□ -0.64
ATL3-202ENST00000535789 RASL11AQ6T310 242 aa11.07□□□□□ -0.64
ATL3-202ENST00000535789 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
ATL3-202ENST00000535789 CRYGDP07320 174 aa11.06□□□□□ -0.64
ATL3-202ENST00000535789 CAMPP49913 170 aa11.06□□□□□ -0.64
ATL3-202ENST00000535789 SPATA12Q7Z6I5 190 aa11.06□□□□□ -0.64
ATL3-202ENST00000535789 Q8N3U1 123 aa11.06□□□□□ -0.64
ATL3-202ENST00000535789 PRADC1Q9BSG0 188 aa11.06□□□□□ -0.64
ATL3-202ENST00000535789 A0A087WWL8 130 aa11.05□□□□□ -0.64
ATL3-202ENST00000535789 TMEM136Q6ZRR5 245 aa11.05□□□□□ -0.64
ATL3-202ENST00000535789 SH2D6Q7Z4S9 175 aa11.05□□□□□ -0.64
ATL3-202ENST00000535789 GAGE12JA6NER3 117 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 C16orf90A8MZG2 172 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 TRGC1P0CF51 173 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 FUSP35637 526 aaKnown RBP eCLIP11.04□□□□□ -0.64
ATL3-202ENST00000535789 GAGE1Q13065 139 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 GAGE4Q13068 117 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 GAGE5Q13069 117 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 TMEM191AQ9H0A3 160 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 KIF25-AS1Q9Y6Z4 181 aa11.04□□□□□ -0.64
ATL3-202ENST00000535789 S100A8P05109 93 aa11.03□□□□□ -0.64
ATL3-202ENST00000535789 RAB5AP20339 215 aa11.03□□□□□ -0.64
ATL3-202ENST00000535789 EVI2AP22794 236 aa11.03□□□□□ -0.64
ATL3-202ENST00000535789 COX19Q49B96 90 aa11.03□□□□□ -0.64
ATL3-202ENST00000535789 LINC01556Q5JQF7 62 aa11.03□□□□□ -0.64
ATL3-202ENST00000535789 ATP6V0E2Q8NHE4 81 aa11.03□□□□□ -0.64
ATL3-202ENST00000535789 GNB1LQ9BYB4 327 aa11.03□□□□□ -0.64
ATL3-202ENST00000535789 GTSF1LQ9H1H1 148 aa11.03□□□□□ -0.64
ATL3-202ENST00000535789 IGHV3-38A0A0C4DH36 116 aa11.02□□□□□ -0.65
ATL3-202ENST00000535789 LELP1Q5T871 98 aa11.02□□□□□ -0.65
ATL3-202ENST00000535789 RHODO00212 210 aa11.01□□□□□ -0.65
ATL3-202ENST00000535789 HLA-DQA1P01909 254 aa11.01□□□□□ -0.65
ATL3-202ENST00000535789 RNF185Q96GF1 192 aa11.01□□□□□ -0.65
ATL3-202ENST00000535789 DPH3P1Q9H4G8 78 aa11.01□□□□□ -0.65
ATL3-202ENST00000535789 DNAH8Q96JB1 4490 aa11□□□□□ -0.65
ATL3-202ENST00000535789 MT-ND6P03923 174 aa11□□□□□ -0.65
ATL3-202ENST00000535789 RAB4BP61018 213 aa11□□□□□ -0.65
ATL3-202ENST00000535789 OR10J3Q5JRS4 329 aa11□□□□□ -0.65
ATL3-202ENST00000535789 FAM104BQ5XKR9 115 aa11□□□□□ -0.65
ATL3-202ENST00000535789 SMIM15Q7Z3B0 74 aa11□□□□□ -0.65
ATL3-202ENST00000535789 AMN1Q8IY45 258 aa11□□□□□ -0.65
ATL3-202ENST00000535789 SREK1IP1Q8N9Q2 155 aaPredicted RBP11□□□□□ -0.65
ATL3-202ENST00000535789 K7EP13 123 aa10.99□□□□□ -0.65
ATL3-202ENST00000535789 IGHV3-30P01768 117 aa10.99□□□□□ -0.65
ATL3-202ENST00000535789 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
ATL3-202ENST00000535789 IGHV3-30-3P0DP02 117 aa10.99□□□□□ -0.65
ATL3-202ENST00000535789 IGHV3-30-5P0DP03 117 aa10.99□□□□□ -0.65
ATL3-202ENST00000535789 RPS10P46783 165 aaKnown RBP10.99□□□□□ -0.65
ATL3-202ENST00000535789 KRTAP4-5Q9BYR2 181 aa10.99□□□□□ -0.65
ATL3-202ENST00000535789 MRPL18Q9H0U6 180 aaKnown RBP10.99□□□□□ -0.65
ATL3-202ENST00000535789 TRAV9-2A0A087WT02 112 aa10.98□□□□□ -0.65
ATL3-202ENST00000535789 A0A087WTM6 91 aa10.98□□□□□ -0.65
ATL3-202ENST00000535789 RAB4AP20338 218 aa10.98□□□□□ -0.65
ATL3-202ENST00000535789 TRAV8-6A0A0B4J262 113 aa10.97□□□□□ -0.65
ATL3-202ENST00000535789 IBA57-AS1B1ANH7 110 aa10.97□□□□□ -0.65
ATL3-202ENST00000535789 PHOX2AO14813 284 aa10.97□□□□□ -0.65
ATL3-202ENST00000535789 SMIM17P0DL12 118 aa10.97□□□□□ -0.65
ATL3-202ENST00000535789 MRPL51Q4U2R6 128 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms