RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 OSTCQ9NRP0 149 aa8.41□□□□□ -1.06
CHD4-203ENST00000535717 A0A1W2PPQ1 181 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 CIDEAO60543 219 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 ESDP10768 282 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 SPANXN1Q5VSR9 72 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 LGALS9CQ6DKI2 356 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 UFSP1Q6NVU6 142 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 LYZL1Q6UWQ5 148 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 GTSF1Q8WW33 167 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 ANAPC16Q96DE5 110 aa8.4□□□□□ -1.06
CHD4-203ENST00000535717 A0A087WWL8 130 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 A8MWL6 223 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 F2Z2F3 143 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 LY6G6CO95867 125 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 CRYGDP07320 174 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 CTRLP40313 264 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 CT83Q5H943 113 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 Q6ZSN1 163 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 MSRB1Q9NZV6 116 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 V9GYV3 84 aa8.39□□□□□ -1.07
CHD4-203ENST00000535717 A0A096LPF7 62 aa8.38□□□□□ -1.07
CHD4-203ENST00000535717 CACNG7P62955 275 aa8.38□□□□□ -1.07
CHD4-203ENST00000535717 PDZD11Q5EBL8 140 aa8.38□□□□□ -1.07
CHD4-203ENST00000535717 FAM74A4Q5TZK3 123 aa8.38□□□□□ -1.07
CHD4-203ENST00000535717 SLC25A29Q8N8R3 303 aa8.38□□□□□ -1.07
CHD4-203ENST00000535717 OR10G8Q8NGN5 311 aa8.38□□□□□ -1.07
CHD4-203ENST00000535717 TRAV9-1A0A075B6T8 112 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 LOC100131303A0A0U1RQF7 123 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 TRBV6-4A0A1B0GX49 114 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 RHODO00212 210 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 P0DMU3 169 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 FAM231AP0DMU4 169 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 FAM231CP0DMU5 169 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 GYPEP15421 78 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 WDR73Q6P4I2 378 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 TSKUQ8WUA8 353 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 MIEN1Q9BRT3 115 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 CNFNQ9BYD5 112 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 ICOSQ9Y6W8 199 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 RYR2Q92736 4967 aa8.37□□□□□ -1.07
CHD4-203ENST00000535717 K7EP13 123 aa8.36□□□□□ -1.07
CHD4-203ENST00000535717 K7EQD1 137 aa8.36□□□□□ -1.07
CHD4-203ENST00000535717 NTF3P20783 257 aa8.36□□□□□ -1.07
CHD4-203ENST00000535717 G0S2P27469 103 aa8.36□□□□□ -1.07
CHD4-203ENST00000535717 FOXA3P55318 350 aaPredicted RBP8.36□□□□□ -1.07
CHD4-203ENST00000535717 C14orf178Q8N769 122 aaPredicted RBP8.36□□□□□ -1.07
CHD4-203ENST00000535717 PGLYRP4Q96LB8 373 aa8.36□□□□□ -1.07
CHD4-203ENST00000535717 AP1S3Q96PC3 154 aa8.36□□□□□ -1.07
CHD4-203ENST00000535717 GFRA4Q9GZZ7 299 aa8.36□□□□□ -1.07
CHD4-203ENST00000535717 KIF25-AS1Q9Y6Z4 181 aa8.36□□□□□ -1.07
CHD4-203ENST00000535717 URGCP-MRPS24S4R325 110 aa8.36□□□□□ -1.07
CHD4-203ENST00000535717 HYDINQ4G0P3 5121 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 FAM231BA6NCW3 169 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 LINC00315P59091 139 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 RHOHQ15669 191 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 MRPL23Q16540 153 aaKnown RBP8.35□□□□□ -1.07
CHD4-203ENST00000535717 COL5A1-AS1Q5SY13 56 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 ORAOV1Q8WV07 137 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 PRADC1Q9BSG0 188 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 Q9UF83 564 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 DNAH6Q9C0G6 4158 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 KMT2AQ03164 3969 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 RYR3Q15413 4870 aa8.35□□□□□ -1.07
CHD4-203ENST00000535717 HIGD1CA8MV81 97 aa8.34□□□□□ -1.07
CHD4-203ENST00000535717 PPBPP02775 128 aa8.34□□□□□ -1.07
CHD4-203ENST00000535717 NPSP0C0P6 89 aa8.34□□□□□ -1.07
CHD4-203ENST00000535717 SRIP30626 198 aa8.34□□□□□ -1.07
CHD4-203ENST00000535717 TWIST1Q15672 202 aa8.34□□□□□ -1.07
CHD4-203ENST00000535717 ESRGQ1W209 222 aa8.34□□□□□ -1.07
CHD4-203ENST00000535717 KCNIP4Q6PIL6 250 aa8.34□□□□□ -1.07
CHD4-203ENST00000535717 UBE2DNLQ8IWF7 75 aa8.34□□□□□ -1.07
CHD4-203ENST00000535717 LINC00588Q9Y4M8 146 aa8.34□□□□□ -1.07
CHD4-203ENST00000535717 SMIM27A0A1W2PRY6 76 aa8.33□□□□□ -1.08
CHD4-203ENST00000535717 SMIM17P0DL12 118 aa8.33□□□□□ -1.08
CHD4-203ENST00000535717 EVI2AP22794 236 aa8.33□□□□□ -1.08
CHD4-203ENST00000535717 CCL18P55774 89 aa8.33□□□□□ -1.08
CHD4-203ENST00000535717 RBX1P62877 108 aa8.33□□□□□ -1.08
CHD4-203ENST00000535717 ZNF56Q15929 161 aa8.33□□□□□ -1.08
CHD4-203ENST00000535717 NEGR1Q7Z3B1 354 aa8.33□□□□□ -1.08
CHD4-203ENST00000535717 NUP35Q8NFH5 326 aa8.33□□□□□ -1.08
CHD4-203ENST00000535717 F5H697 171 aa8.32□□□□□ -1.08
CHD4-203ENST00000535717 LYPD5Q6UWN5 251 aa8.32□□□□□ -1.08
CHD4-203ENST00000535717 A0A1B0GUT8 65 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 GAGE12JA6NER3 117 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 MGPP08493 103 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 LINC00694P0DN24 101 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 GAGE4Q13068 117 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 GAGE5Q13069 117 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 GAGE13Q4V321 117 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 SH2D6Q7Z4S9 175 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 DPH3P1Q9H4G8 78 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 NAT8BQ9UHF3 227 aa8.31□□□□□ -1.08
CHD4-203ENST00000535717 MRPS16Q9Y3D3 137 aaKnown RBP8.31□□□□□ -1.08
CHD4-203ENST00000535717 TRBV10-1A0A0K0K1A3 114 aa8.3□□□□□ -1.08
CHD4-203ENST00000535717 C21orf62-AS1Q17RA5 79 aa8.3□□□□□ -1.08
CHD4-203ENST00000535717 ZNRF2Q8NHG8 242 aa8.3□□□□□ -1.08
CHD4-203ENST00000535717 M0QY20 66 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms