RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 IGLV2-8P01709 118 aa13.2□□□□□ -0.3
PHRF1-206ENST00000534320 C2orf70A6NJV1 201 aa13.2□□□□□ -0.3
PHRF1-206ENST00000534320 DEFB121Q5J5C9 76 aa13.2□□□□□ -0.3
PHRF1-206ENST00000534320 A4D1N5 150 aa13.2□□□□□ -0.3
PHRF1-206ENST00000534320 LINC00173Q6ZV60 143 aa13.19□□□□□ -0.3
PHRF1-206ENST00000534320 U3KQE9 123 aa13.19□□□□□ -0.3
PHRF1-206ENST00000534320 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
PHRF1-206ENST00000534320 F5H768 121 aa13.19□□□□□ -0.3
PHRF1-206ENST00000534320 CTRLP40313 264 aa13.19□□□□□ -0.3
PHRF1-206ENST00000534320 APOC4P55056 127 aa13.18□□□□□ -0.3
PHRF1-206ENST00000534320 NDUFV3P56181 108 aaKnown RBP13.18□□□□□ -0.3
PHRF1-206ENST00000534320 EBI3Q14213 229 aa13.18□□□□□ -0.3
PHRF1-206ENST00000534320 MUSTN1Q8IVN3 82 aa13.18□□□□□ -0.3
PHRF1-206ENST00000534320 DSCAMO60469 2012 aa13.18□□□□□ -0.3
PHRF1-206ENST00000534320 LINC00643Q86TS7 51 aa13.18□□□□□ -0.3
PHRF1-206ENST00000534320 DEFB1P60022 68 aa13.18□□□□□ -0.3
PHRF1-206ENST00000534320 UQCRQO14949 82 aa13.17□□□□□ -0.3
PHRF1-206ENST00000534320 FUSP35637 526 aaKnown RBP eCLIP13.17□□□□□ -0.3
PHRF1-206ENST00000534320 LOXL1Q08397 574 aaPredicted RBP13.17□□□□□ -0.3
PHRF1-206ENST00000534320 Q6ZUT4 128 aa13.17□□□□□ -0.3
PHRF1-206ENST00000534320 Q9H8V8 135 aa13.17□□□□□ -0.3
PHRF1-206ENST00000534320 CLPSL1A2RUU4 121 aa13.16□□□□□ -0.3
PHRF1-206ENST00000534320 NOP10Q9NPE3 64 aaKnown RBP13.16□□□□□ -0.3
PHRF1-206ENST00000534320 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
PHRF1-206ENST00000534320 KIAA1549Q9HCM3 1950 aa13.16□□□□□ -0.3
PHRF1-206ENST00000534320 PTPN13Q12923 2485 aa13.16□□□□□ -0.3
PHRF1-206ENST00000534320 RNF152Q8N8N0 203 aa13.16□□□□□ -0.3
PHRF1-206ENST00000534320 H3BQ85 93 aa13.15□□□□□ -0.3
PHRF1-206ENST00000534320 LINC00322Q6ZN03 302 aaPredicted RBP13.15□□□□□ -0.3
PHRF1-206ENST00000534320 JMJD7-PLA2G4BH0Y9G9 81 aa13.15□□□□□ -0.3
PHRF1-206ENST00000534320 CHKB-CPT1BH3BT56 60 aa13.15□□□□□ -0.3
PHRF1-206ENST00000534320 BAALCQ8WXS3 180 aa13.15□□□□□ -0.3
PHRF1-206ENST00000534320 IGF1P05019 195 aa13.14□□□□□ -0.31
PHRF1-206ENST00000534320 PLXNB1O43157 2135 aa13.14□□□□□ -0.31
PHRF1-206ENST00000534320 RNASE13Q5GAN3 156 aaKnown RBP13.14□□□□□ -0.31
PHRF1-206ENST00000534320 SLC25A29Q8N8R3 303 aa13.14□□□□□ -0.31
PHRF1-206ENST00000534320 Q8N1Y9 231 aa13.13□□□□□ -0.31
PHRF1-206ENST00000534320 MLST8Q9BVC4 326 aa13.13□□□□□ -0.31
PHRF1-206ENST00000534320 PSCAO43653 123 aa13.13□□□□□ -0.31
PHRF1-206ENST00000534320 NDUFS5O43920 106 aa13.13□□□□□ -0.31
PHRF1-206ENST00000534320 CPAMD8Q8IZJ3 1885 aa13.13□□□□□ -0.31
PHRF1-206ENST00000534320 FAM240AA0A1B0GVK7 77 aa13.12□□□□□ -0.31
PHRF1-206ENST00000534320 A0A1B0GXF2 115 aa13.12□□□□□ -0.31
PHRF1-206ENST00000534320 MED14OSP0DP75 135 aa13.12□□□□□ -0.31
PHRF1-206ENST00000534320 ZNF80P51504 273 aaPredicted RBP13.12□□□□□ -0.31
PHRF1-206ENST00000534320 C4orf3Q8WVX3 66 aa13.11□□□□□ -0.31
PHRF1-206ENST00000534320 PKIGQ9Y2B9 76 aa13.11□□□□□ -0.31
PHRF1-206ENST00000534320 CDSNQ15517 529 aa13.11□□□□□ -0.31
PHRF1-206ENST00000534320 NREPQ16612 68 aa13.11□□□□□ -0.31
PHRF1-206ENST00000534320 HCFC1P51610 2035 aa13.11□□□□□ -0.31
PHRF1-206ENST00000534320 HIVEP2P31629 2446 aa13.11□□□□□ -0.31
PHRF1-206ENST00000534320 PRB2P02812 416 aaPredicted RBP13.1□□□□□ -0.31
PHRF1-206ENST00000534320 OPRPNQ99935 248 aaPredicted RBP13.1□□□□□ -0.31
PHRF1-206ENST00000534320 UBE2DNLQ8IWF7 75 aa13.1□□□□□ -0.31
PHRF1-206ENST00000534320 LRRC75A-AS1Q8N1F1 130 aa13.1□□□□□ -0.31
PHRF1-206ENST00000534320 SPTSSBQ8NFR3 76 aa13.1□□□□□ -0.31
PHRF1-206ENST00000534320 NAV2Q8IVL1 2488 aa13.1□□□□□ -0.31
PHRF1-206ENST00000534320 LGALS9O00182 355 aa13.1□□□□□ -0.31
PHRF1-206ENST00000534320 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.09□□□□□ -0.31
PHRF1-206ENST00000534320 IGKV2-29A2NJV5 120 aaPredicted RBP13.09□□□□□ -0.31
PHRF1-206ENST00000534320 EXPH5Q8NEV8 1989 aa13.09□□□□□ -0.31
PHRF1-206ENST00000534320 A0A0J9YX75 114 aa13.09□□□□□ -0.31
PHRF1-206ENST00000534320 MT-ATP8P03928 68 aa13.09□□□□□ -0.31
PHRF1-206ENST00000534320 VSIG2Q96IQ7 327 aa13.09□□□□□ -0.31
PHRF1-206ENST00000534320 SND1-IT1Q9HBX3 110 aa13.09□□□□□ -0.31
PHRF1-206ENST00000534320 PTH2Q96A98 100 aa13.08□□□□□ -0.32
PHRF1-206ENST00000534320 MBD6Q96DN6 1003 aa13.08□□□□□ -0.32
PHRF1-206ENST00000534320 SPANXB1Q9NS25 103 aaPredicted RBP13.08□□□□□ -0.32
PHRF1-206ENST00000534320 TMEM61Q8N0U2 210 aa13.08□□□□□ -0.32
PHRF1-206ENST00000534320 A0A096LPF7 62 aa13.08□□□□□ -0.32
PHRF1-206ENST00000534320 FAM236DA0A1B0GTK5 79 aa13.08□□□□□ -0.32
PHRF1-206ENST00000534320 E9PLD3 99 aa13.08□□□□□ -0.32
PHRF1-206ENST00000534320 IGHV4-31P0DP07 118 aa13.08□□□□□ -0.32
PHRF1-206ENST00000534320 FAM236CP0DP71 79 aa13.08□□□□□ -0.32
PHRF1-206ENST00000534320 COL4A2P08572 1712 aa13.08□□□□□ -0.32
PHRF1-206ENST00000534320 RBX1P62877 108 aa13.07□□□□□ -0.32
PHRF1-206ENST00000534320 PIFOQ8TCI5 191 aa13.07□□□□□ -0.32
PHRF1-206ENST00000534320 YPEL4Q96NS1 127 aa13.07□□□□□ -0.32
PHRF1-206ENST00000534320 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
PHRF1-206ENST00000534320 Q8N6K4 173 aa13.07□□□□□ -0.32
PHRF1-206ENST00000534320 ZFAND3Q9H8U3 227 aa13.07□□□□□ -0.32
PHRF1-206ENST00000534320 C9orf66Q5T8R8 295 aa13.07□□□□□ -0.32
PHRF1-206ENST00000534320 A0A0U1RQV1 116 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 MYCNOSP40205 109 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 Q6YL49 198 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 C3orf22Q8N5N4 141 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 C16orf74Q96GX8 76 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 CEP295Q9C0D2 2601 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 NDUFC2-KCTD14E9PQ53 114 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 COX7B2Q8TF08 81 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 TTTY13Q9BZ97 58 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 DNAJC9-AS1A6NH13 148 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 SPATA12Q7Z6I5 190 aa13.06□□□□□ -0.32
PHRF1-206ENST00000534320 CEP350Q5VT06 3117 aa13.05□□□□□ -0.32
PHRF1-206ENST00000534320 C14orf132Q9NPU4 83 aa13.05□□□□□ -0.32
PHRF1-206ENST00000534320 TRAV4A0A0B4J268 109 aa13.05□□□□□ -0.32
PHRF1-206ENST00000534320 MDFICQ9P1T7 246 aa13.04□□□□□ -0.32
PHRF1-206ENST00000534320 IGLC6P0CF74 106 aa13.03□□□□□ -0.32
PHRF1-206ENST00000534320 EML5Q05BV3 1969 aa13.03□□□□□ -0.32
PHRF1-206ENST00000534320 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms