RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 PRR34Q9NV39 138 aa11.58□□□□□ -0.56
UBXN1-216ENST00000533908 PAGE4O60829 102 aa11.57□□□□□ -0.56
UBXN1-216ENST00000533908 MT1HL1P0DM35 61 aa11.57□□□□□ -0.56
UBXN1-216ENST00000533908 AKR1C3P42330 323 aa11.57□□□□□ -0.56
UBXN1-216ENST00000533908 MIAQ16674 131 aa11.57□□□□□ -0.56
UBXN1-216ENST00000533908 CLPSL2Q6UWE3 100 aa11.57□□□□□ -0.56
UBXN1-216ENST00000533908 MLST8Q9BVC4 326 aa11.57□□□□□ -0.56
UBXN1-216ENST00000533908 KIF25-AS1Q9Y6Z4 181 aa11.57□□□□□ -0.56
UBXN1-216ENST00000533908 SNAI2O43623 268 aa11.56□□□□□ -0.56
UBXN1-216ENST00000533908 SSTP61278 116 aa11.56□□□□□ -0.56
UBXN1-216ENST00000533908 RBX1P62877 108 aa11.56□□□□□ -0.56
UBXN1-216ENST00000533908 TCEAL7Q9BRU2 100 aa11.56□□□□□ -0.56
UBXN1-216ENST00000533908 ZNF471Q9BX82 626 aaPredicted RBP11.56□□□□□ -0.56
UBXN1-216ENST00000533908 GAGE6Q13070 117 aa11.55□□□□□ -0.56
UBXN1-216ENST00000533908 LINC00269Q8N2A0 174 aa11.55□□□□□ -0.56
UBXN1-216ENST00000533908 VAX2Q9UIW0 290 aa11.55□□□□□ -0.56
UBXN1-216ENST00000533908 F5H697 171 aa11.54□□□□□ -0.56
UBXN1-216ENST00000533908 CXCL1P09341 107 aa11.54□□□□□ -0.56
UBXN1-216ENST00000533908 STOML3Q8TAV4 291 aa11.54□□□□□ -0.56
UBXN1-216ENST00000533908 SCO2A0A1W2PP80 73 aa11.53□□□□□ -0.56
UBXN1-216ENST00000533908 OR5AL1P0C617 328 aa11.53□□□□□ -0.56
UBXN1-216ENST00000533908 DERL1Q9BUN8 251 aa11.53□□□□□ -0.56
UBXN1-216ENST00000533908 ARPC5O15511 151 aa11.52□□□□□ -0.57
UBXN1-216ENST00000533908 SPANXN1Q5VSR9 72 aa11.52□□□□□ -0.57
UBXN1-216ENST00000533908 BAGE2Q86Y30 109 aa11.52□□□□□ -0.57
UBXN1-216ENST00000533908 A0A1B0GV50 99 aa11.51□□□□□ -0.57
UBXN1-216ENST00000533908 SLPIP03973 132 aa11.51□□□□□ -0.57
UBXN1-216ENST00000533908 MBD3L1Q8WWY6 194 aa11.51□□□□□ -0.57
UBXN1-216ENST00000533908 IGLV10-54A0A075B6I4 117 aa11.5□□□□□ -0.57
UBXN1-216ENST00000533908 S100A9P06702 114 aaKnown RBP11.5□□□□□ -0.57
UBXN1-216ENST00000533908 PKIAP61925 76 aa11.5□□□□□ -0.57
UBXN1-216ENST00000533908 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
UBXN1-216ENST00000533908 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
UBXN1-216ENST00000533908 TMEM97Q5BJF2 176 aa11.5□□□□□ -0.57
UBXN1-216ENST00000533908 SFT2D1Q8WV19 159 aa11.5□□□□□ -0.57
UBXN1-216ENST00000533908 TRBV25-1A0A075B6N4 114 aa11.49□□□□□ -0.57
UBXN1-216ENST00000533908 TMUB2Q71RG4 321 aa11.49□□□□□ -0.57
UBXN1-216ENST00000533908 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.49□□□□□ -0.57
UBXN1-216ENST00000533908 C20orf203Q8NBC4 194 aa11.49□□□□□ -0.57
UBXN1-216ENST00000533908 GFRA4Q9GZZ7 299 aa11.49□□□□□ -0.57
UBXN1-216ENST00000533908 SMLR1H3BR10 107 aa11.48□□□□□ -0.57
UBXN1-216ENST00000533908 M0QY20 66 aa11.48□□□□□ -0.57
UBXN1-216ENST00000533908 REG3AQ06141 175 aa11.48□□□□□ -0.57
UBXN1-216ENST00000533908 CLRN3Q8NCR9 226 aa11.48□□□□□ -0.57
UBXN1-216ENST00000533908 IGLV4-60A0A075B6I1 120 aa11.47□□□□□ -0.57
UBXN1-216ENST00000533908 GZMBP10144 247 aa11.47□□□□□ -0.57
UBXN1-216ENST00000533908 CNBPP62633 177 aaKnown RBP11.47□□□□□ -0.57
UBXN1-216ENST00000533908 FAM213BQ8TBF2 198 aa11.47□□□□□ -0.57
UBXN1-216ENST00000533908 IGHV1-24A0A0C4DH33 117 aa11.46□□□□□ -0.57
UBXN1-216ENST00000533908 CHTF8P0CG12 524 aa11.46□□□□□ -0.57
UBXN1-216ENST00000533908 Q6ZRU5 148 aa11.46□□□□□ -0.57
UBXN1-216ENST00000533908 hDV102S1A0JD36 115 aa11.45□□□□□ -0.58
UBXN1-216ENST00000533908 IGLC6P0CF74 106 aa11.45□□□□□ -0.58
UBXN1-216ENST00000533908 SMIM17P0DL12 118 aa11.45□□□□□ -0.58
UBXN1-216ENST00000533908 RAB5CP51148 216 aa11.45□□□□□ -0.58
UBXN1-216ENST00000533908 SUMO4Q6EEV6 95 aa11.45□□□□□ -0.58
UBXN1-216ENST00000533908 AP1S3Q96PC3 154 aa11.45□□□□□ -0.58
UBXN1-216ENST00000533908 A0A087WYN8 130 aa11.44□□□□□ -0.58
UBXN1-216ENST00000533908 A0A0D9SG52 128 aa11.44□□□□□ -0.58
UBXN1-216ENST00000533908 MGPP08493 103 aa11.44□□□□□ -0.58
UBXN1-216ENST00000533908 RPL35P42766 123 aaKnown RBP11.44□□□□□ -0.58
UBXN1-216ENST00000533908 KCNRGQ8N5I3 272 aa11.44□□□□□ -0.58
UBXN1-216ENST00000533908 NKX2-5P52952 324 aaPredicted RBP11.43□□□□□ -0.58
UBXN1-216ENST00000533908 CCL20P78556 96 aa11.43□□□□□ -0.58
UBXN1-216ENST00000533908 TRAV8-4A0A0B4J246 113 aa11.42□□□□□ -0.58
UBXN1-216ENST00000533908 A0A1B0GUV1 79 aa11.42□□□□□ -0.58
UBXN1-216ENST00000533908 UMAD1C9J7I0 102 aa11.42□□□□□ -0.58
UBXN1-216ENST00000533908 PFDN1O60925 122 aa11.42□□□□□ -0.58
UBXN1-216ENST00000533908 P01737 135 aa11.42□□□□□ -0.58
UBXN1-216ENST00000533908 DPH3Q96FX2 82 aa11.42□□□□□ -0.58
UBXN1-216ENST00000533908 TPPP3Q9BW30 176 aa11.42□□□□□ -0.58
UBXN1-216ENST00000533908 IGHV3-64A0A075B6Q5 118 aa11.41□□□□□ -0.58
UBXN1-216ENST00000533908 FER1L6-AS1Q8NA97 138 aa11.41□□□□□ -0.58
UBXN1-216ENST00000533908 SPACA4Q8TDM5 124 aa11.41□□□□□ -0.58
UBXN1-216ENST00000533908 TMEM243Q9BU79 118 aa11.41□□□□□ -0.58
UBXN1-216ENST00000533908 C19orf71A6NCJ1 209 aa11.4□□□□□ -0.58
UBXN1-216ENST00000533908 H2AFB1P0C5Y9 115 aa11.4□□□□□ -0.58
UBXN1-216ENST00000533908 OR2D3Q8NGH3 330 aa11.4□□□□□ -0.58
UBXN1-216ENST00000533908 BATF3Q9NR55 127 aa11.4□□□□□ -0.58
UBXN1-216ENST00000533908 H7C1H1 209 aa11.39□□□□□ -0.59
UBXN1-216ENST00000533908 ZNF345Q14585 488 aa11.39□□□□□ -0.59
UBXN1-216ENST00000533908 RASL11AQ6T310 242 aa11.39□□□□□ -0.59
UBXN1-216ENST00000533908 C15orf56Q8N910 161 aa11.39□□□□□ -0.59
UBXN1-216ENST00000533908 C11orf52Q96A22 123 aa11.39□□□□□ -0.59
UBXN1-216ENST00000533908 RNF185Q96GF1 192 aa11.39□□□□□ -0.59
UBXN1-216ENST00000533908 RAB19A4D1S5 217 aa11.38□□□□□ -0.59
UBXN1-216ENST00000533908 PHOX2AO14813 284 aa11.38□□□□□ -0.59
UBXN1-216ENST00000533908 CENPWQ5EE01 88 aa11.38□□□□□ -0.59
UBXN1-216ENST00000533908 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
UBXN1-216ENST00000533908 PLAC8Q9NZF1 115 aa11.38□□□□□ -0.59
UBXN1-216ENST00000533908 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.37□□□□□ -0.59
UBXN1-216ENST00000533908 CACNG7P62955 275 aa11.37□□□□□ -0.59
UBXN1-216ENST00000533908 ODF1Q14990 250 aa11.37□□□□□ -0.59
UBXN1-216ENST00000533908 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
UBXN1-216ENST00000533908 NIT2Q9NQR4 276 aa11.37□□□□□ -0.59
UBXN1-216ENST00000533908 RPS20P60866 119 aaKnown RBP11.36□□□□□ -0.59
UBXN1-216ENST00000533908 COX6A2Q02221 97 aa11.36□□□□□ -0.59
UBXN1-216ENST00000533908 LYZL1Q6UWQ5 148 aa11.36□□□□□ -0.59
UBXN1-216ENST00000533908 GNG13Q9P2W3 67 aa11.36□□□□□ -0.59
UBXN1-216ENST00000533908 GAGE12HA6NDE8 117 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms