RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 DPH3Q96FX2 82 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 WFDC6Q9BQY6 131 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 PRR15LQ9BU68 103 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 MYO7AQ13402 2215 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 IFT172Q9UG01 1749 aa-0.08□□□□□ -2.42
BRCA2-205ENST00000533776 F8P00451 2351 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 GRIN2AQ12879 1464 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 DOCK1Q14185 1865 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 CASKIN1Q8WXD9 1431 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 NDUFA2O43678 99 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 COX4I1P13073 169 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 INSL4Q14641 139 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 Q5BKY6 102 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 PPP1R1CQ8WVI7 109 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 TMEM242Q9NWH2 141 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 COPZ2Q9P299 210 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 V9GYV3 84 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 NSD1Q96L73 2696 aaPredicted RBP-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 FLNCQ14315 2725 aa-0.09□□□□□ -2.42
BRCA2-205ENST00000533776 PRDM2Q13029 1718 aa-0.1□□□□□ -2.42
BRCA2-205ENST00000533776 PATJQ8NI35 1801 aa-0.1□□□□□ -2.43
BRCA2-205ENST00000533776 SPEF2Q9C093 1822 aa-0.1□□□□□ -2.43
BRCA2-205ENST00000533776 TMEM14DPA8MWL7 114 aa-0.1□□□□□ -2.43
BRCA2-205ENST00000533776 F2Z2F3 143 aa-0.1□□□□□ -2.43
BRCA2-205ENST00000533776 K7ERU9 68 aa-0.1□□□□□ -2.43
BRCA2-205ENST00000533776 RRAS2P62070 204 aaPredicted RBP-0.1□□□□□ -2.43
BRCA2-205ENST00000533776 LSM10Q969L4 123 aaKnown RBP-0.1□□□□□ -2.43
BRCA2-205ENST00000533776 UNC79Q9P2D8 2635 aa-0.1□□□□□ -2.43
BRCA2-205ENST00000533776 ASXL3Q9C0F0 2248 aa-0.1□□□□□ -2.43
BRCA2-205ENST00000533776 DAPK1P53355 1430 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 KMT2AQ03164 3969 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 LRRC37A3O60309 1634 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 IL5P05113 134 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 ACYP2P14621 99 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 COPZ1P61923 177 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 SMCO1Q147U7 214 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 Q5VV11 94 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 SCIMPQ6UWF3 145 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 LZICQ8WZA0 190 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 TMEM191AQ9H0A3 160 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 TPT1P8Q9HAU6 139 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 ZNF518AQ6AHZ1 1483 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 PXDNQ92626 1479 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 IFT140Q96RY7 1462 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 MBD5Q9P267 1494 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 CACNA1CQ13936 2221 aa-0.11□□□□□ -2.43
BRCA2-205ENST00000533776 HIVEP3Q5T1R4 2406 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 NWD2Q9ULI1 1742 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 PLXNB2O15031 1838 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 ZNF236Q9UL36 1845 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 SPAARA0A1B0GVQ0 90 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 J3QR89 54 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 NDUFB6O95139 128 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 CBLN1P23435 193 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 GUCA1AP43080 201 aaPredicted RBP-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 CCL8P80075 99 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 S100A7L2Q5SY68 101 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 FAM74A4Q5TZK3 123 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 ZNF818PQ6ZRF7 136 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 Q8N8P6 123 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 RPRMQ9NS64 109 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 LINC00312Q9Y6C7 94 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 QRICH2Q9H0J4 1663 aa-0.12□□□□□ -2.43
BRCA2-205ENST00000533776 SHROOM2Q13796 1616 aa-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 MYH9P35579 1960 aaKnown RBP-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 BCL9LQ86UU0 1499 aa-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 TRAV1-2A0A0B4J238 106 aa-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 LOC100130705A0A1B0GUX0 176 aa-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 APODP05090 189 aa-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 HIST1H1DP16402 221 aaKnown RBP-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 SPTSSBQ8NFR3 76 aa-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 SPTSSAQ969W0 71 aa-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 ARAP2Q8WZ64 1704 aa-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 BIVM-ERCC5R4GMW8 1640 aa-0.13□□□□□ -2.43
BRCA2-205ENST00000533776 MUC12Q9UKN1 5478 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 CFTRP13569 1480 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 TRBV10-3A0A0K0K1G6 114 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 ZNF815PA8K554 130 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 HCG22E2RYF7 251 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 APOC4-APOC2K7ER74 178 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 SIX6O95475 246 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 CCL18P55774 89 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 COX6A2Q02221 97 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 SSBP3-AS1Q7Z2R9 100 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 PSMG3Q9BT73 122 aaPredicted RBP-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 SEC11CQ9BY50 192 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 LINC00470Q9BZP3 86 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 AGPAT4-IT1Q9H0P7 198 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 WNK2Q9Y3S1 2297 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 CACNA1AO00555 2505 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 KDM3BQ7LBC6 1761 aa-0.14□□□□□ -2.43
BRCA2-205ENST00000533776 MYH7P12883 1935 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 MRC1P22897 1456 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 NEBP20929 6669 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 K7EP13 123 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 SPINK1P00995 79 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 IFNA17P01571 189 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 PIPP12273 146 aaPredicted RBP-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 ARPC4P59998 168 aa-0.15□□□□□ -2.43
BRCA2-205ENST00000533776 KCNRGQ8N5I3 272 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms