RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	SH2D6	Q7Z4S9	175 aa		11.77	□□□□□ -0.53
PPFIA1-222	ENST00000532504	GTSF1	Q8WW33	167 aa		11.77	□□□□□ -0.53
PPFIA1-222	ENST00000532504	TRBV7-3	A0A075B6L6	115 aa		11.76	□□□□□ -0.53
PPFIA1-222	ENST00000532504		Q0VG73	95 aa		11.76	□□□□□ -0.53
PPFIA1-222	ENST00000532504	VSIG2	Q96IQ7	327 aa		11.76	□□□□□ -0.53
PPFIA1-222	ENST00000532504	HELZ2	Q9BYK8	2649 aa	Known RBP	11.75	□□□□□ -0.53
PPFIA1-222	ENST00000532504	SPINK8	P0C7L1	97 aa		11.74	□□□□□ -0.53
PPFIA1-222	ENST00000532504	DAZ2	Q13117	558 aa	Known RBP	11.74	□□□□□ -0.53
PPFIA1-222	ENST00000532504	DAZ4	Q86SG3	579 aa	Known RBP	11.74	□□□□□ -0.53
PPFIA1-222	ENST00000532504	DAZ3	Q9NR90	486 aa	Known RBP	11.74	□□□□□ -0.53
PPFIA1-222	ENST00000532504	TRAV8-2	A0A0B4J237	113 aa		11.74	□□□□□ -0.53
PPFIA1-222	ENST00000532504	DNAJC30	Q96LL9	226 aa		11.74	□□□□□ -0.53
PPFIA1-222	ENST00000532504	LINC00518	Q8N0U6	118 aa		11.74	□□□□□ -0.53
PPFIA1-222	ENST00000532504	KLK12	Q9UKR0	248 aa		11.74	□□□□□ -0.53
PPFIA1-222	ENST00000532504	IGHV4-30-4	P0DP06	118 aa		11.73	□□□□□ -0.53
PPFIA1-222	ENST00000532504	C16orf95	Q9H693	158 aa		11.73	□□□□□ -0.53
PPFIA1-222	ENST00000532504	ESD	P10768	282 aa		11.73	□□□□□ -0.53
PPFIA1-222	ENST00000532504	MRPL35	Q9NZE8	188 aa	Known RBP	11.73	□□□□□ -0.53
PPFIA1-222	ENST00000532504	XIRP2	A4UGR9	3374 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	GATD1	Q8NB37	220 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	SMIM9	A6NGZ8	99 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	PRM2	P04554	102 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504		P0DMU3	169 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	FAM231A	P0DMU4	169 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	FAM231C	P0DMU5	169 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	NDUFAF3	Q9BU61	184 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	LBH	Q53QV2	105 aa	Predicted RBP	11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	ZFAND6	Q6FIF0	208 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	TRAV4	A0A0B4J268	109 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	NKAPP1	Q8N9T2	125 aa		11.72	□□□□□ -0.53
PPFIA1-222	ENST00000532504	IGHV4-28	A0A0C4DH34	117 aa		11.71	□□□□□ -0.53
PPFIA1-222	ENST00000532504	ZNF479	Q96JC4	524 aa		11.71	□□□□□ -0.53
PPFIA1-222	ENST00000532504	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.71	□□□□□ -0.54
PPFIA1-222	ENST00000532504	CENPE	Q02224	2701 aa		11.71	□□□□□ -0.54
PPFIA1-222	ENST00000532504	MIF	P14174	115 aa		11.71	□□□□□ -0.54
PPFIA1-222	ENST00000532504	HERVK_113	P63121	156 aa		11.71	□□□□□ -0.54
PPFIA1-222	ENST00000532504	C10orf91	Q5T1B1	145 aa		11.71	□□□□□ -0.54
PPFIA1-222	ENST00000532504	LEPROT	O15243	131 aa		11.7	□□□□□ -0.54
PPFIA1-222	ENST00000532504	LYRM9	A8MSI8	78 aa		11.7	□□□□□ -0.54
PPFIA1-222	ENST00000532504	RNF183	Q96D59	192 aa		11.7	□□□□□ -0.54
PPFIA1-222	ENST00000532504	ODF3	Q96PU9	254 aa		11.69	□□□□□ -0.54
PPFIA1-222	ENST00000532504	TRIO	O75962	3097 aa		11.69	□□□□□ -0.54
PPFIA1-222	ENST00000532504	RPL39	P62891	51 aa	Known RBP	11.69	□□□□□ -0.54
PPFIA1-222	ENST00000532504	ZFP2	Q6ZN57	461 aa		11.69	□□□□□ -0.54
PPFIA1-222	ENST00000532504	EDA2R	Q9HAV5	297 aa		11.69	□□□□□ -0.54
PPFIA1-222	ENST00000532504		A0A1B0GV72	72 aa		11.68	□□□□□ -0.54
PPFIA1-222	ENST00000532504	NDUFS6	O75380	124 aa	Known RBP	11.68	□□□□□ -0.54
PPFIA1-222	ENST00000532504	FGF6	P10767	208 aa		11.68	□□□□□ -0.54
PPFIA1-222	ENST00000532504	NDUFA12	Q9UI09	145 aa		11.68	□□□□□ -0.54
PPFIA1-222	ENST00000532504	ZFAND2A	Q8N6M9	145 aa		11.68	□□□□□ -0.54
PPFIA1-222	ENST00000532504	PROK1	P58294	105 aa		11.68	□□□□□ -0.54
PPFIA1-222	ENST00000532504	RETN	Q9HD89	108 aa		11.68	□□□□□ -0.54
PPFIA1-222	ENST00000532504	MED14OS	P0DP75	135 aa		11.67	□□□□□ -0.54
PPFIA1-222	ENST00000532504	DCANP1	Q8TF63	244 aa		11.67	□□□□□ -0.54
PPFIA1-222	ENST00000532504	TRBV6-1	A0A0K0K1D8	114 aa		11.67	□□□□□ -0.54
PPFIA1-222	ENST00000532504		H3BUT2	72 aa		11.67	□□□□□ -0.54
PPFIA1-222	ENST00000532504	CTRL	P40313	264 aa		11.67	□□□□□ -0.54
PPFIA1-222	ENST00000532504	WDFY4	Q6ZS81	3184 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504	C19orf71	A6NCJ1	209 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504	ODF3L2	Q3SX64	289 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504	ERG28	Q9UKR5	140 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504	ORAOV1	Q8WV07	137 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504	CAMK2N2	Q96S95	79 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504	SPANXA1	Q9NS26	97 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504	FRMD6-AS1	P0C7T7	363 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504		F8VRH5	84 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504	PGPEP1	Q9NXJ5	209 aa		11.66	□□□□□ -0.54
PPFIA1-222	ENST00000532504	SZT2	Q5T011	3432 aa		11.65	□□□□□ -0.54
PPFIA1-222	ENST00000532504	IGLV1-51	P01701	117 aa		11.65	□□□□□ -0.54
PPFIA1-222	ENST00000532504	DKK2	Q9UBU2	259 aa		11.65	□□□□□ -0.54
PPFIA1-222	ENST00000532504	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.65	□□□□□ -0.54
PPFIA1-222	ENST00000532504	CRIP2	P52943	208 aa	Predicted RBP	11.65	□□□□□ -0.54
PPFIA1-222	ENST00000532504	RPL18A	Q02543	176 aa	Known RBP	11.65	□□□□□ -0.54
PPFIA1-222	ENST00000532504	UBE2B	P63146	152 aa		11.65	□□□□□ -0.55
PPFIA1-222	ENST00000532504	COX7A2L	O14548	114 aa		11.64	□□□□□ -0.55
PPFIA1-222	ENST00000532504	HSD52	Q0P140	79 aa		11.64	□□□□□ -0.55
PPFIA1-222	ENST00000532504	KRTAP24-1	Q3LI83	254 aa		11.64	□□□□□ -0.55
PPFIA1-222	ENST00000532504	NAA38	Q9BRA0	125 aa	Known RBP	11.64	□□□□□ -0.55
PPFIA1-222	ENST00000532504	MGA	Q8IWI9	3026 aa		11.64	□□□□□ -0.55
PPFIA1-222	ENST00000532504		A0A0J9YWU9	116 aa		11.64	□□□□□ -0.55
PPFIA1-222	ENST00000532504	CFAP46	Q8IYW2	2715 aa		11.63	□□□□□ -0.55
PPFIA1-222	ENST00000532504		A0A0J9YXV3	536 aa		11.63	□□□□□ -0.55
PPFIA1-222	ENST00000532504	GAGE2E	Q4V326	116 aa		11.63	□□□□□ -0.55
PPFIA1-222	ENST00000532504	GAGE2D	Q9UEU5	116 aa		11.63	□□□□□ -0.55
PPFIA1-222	ENST00000532504	TM2D2	Q9BX73	214 aa		11.63	□□□□□ -0.55
PPFIA1-222	ENST00000532504	IGLV2-18	A0A075B6J9	118 aa		11.63	□□□□□ -0.55
PPFIA1-222	ENST00000532504	KIR2DL5B	A0A0G2JN68	375 aa		11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	KIR2DL5B	A0A0G2JPC4	375 aa		11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	KIR2DL5A	Q8N109	375 aa		11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	KIR2DL5B	Q8NHK3	375 aa		11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	ZNF747	Q9BV97	191 aa		11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	IGLV2-8	P01709	118 aa		11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	NANOS2	P60321	138 aa	Known RBP	11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	TRBV10-1	A0A0K0K1A3	114 aa		11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	SPCS1	Q9Y6A9	102 aa		11.62	□□□□□ -0.55
PPFIA1-222	ENST00000532504	TRAV10	A0A0B4J240	114 aa		11.61	□□□□□ -0.55
PPFIA1-222	ENST00000532504	PRR9	Q5T870	116 aa		11.61	□□□□□ -0.55
PPFIA1-222	ENST00000532504	BRI3	O95415	125 aa		11.61	□□□□□ -0.55
PPFIA1-222	ENST00000532504	GHRH	P01286	108 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms