RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 COX7B2Q8TF08 81 aa-0.55□□□□□ -2.5
PATL1-202ENST00000531919 CALML5Q9NZT1 146 aa-0.55□□□□□ -2.5
PATL1-202ENST00000531919 HIGD1AQ9Y241 93 aa-0.55□□□□□ -2.5
PATL1-202ENST00000531919 MYO7BQ6PIF6 2116 aa-0.55□□□□□ -2.5
PATL1-202ENST00000531919 ERCC6Q03468 1493 aa-0.55□□□□□ -2.5
PATL1-202ENST00000531919 M0R2P5 195 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 SSBP1Q04837 148 aaKnown RBP-0.56□□□□□ -2.5
PATL1-202ENST00000531919 DEFB109BQ30KR1 87 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 CLLU1Q5K131 121 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 ATP11AUNQ6ZP68 121 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 C4orf33Q8N1A6 199 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 SKA2Q8WVK7 121 aaPredicted RBP-0.56□□□□□ -2.5
PATL1-202ENST00000531919 ERG28Q9UKR5 140 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 GINS2Q9Y248 185 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 MYH13Q9UKX3 1938 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 PI4KAP42356 2102 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 MXRA5Q9NR99 2828 aa-0.56□□□□□ -2.5
PATL1-202ENST00000531919 USH2AO75445 5202 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 TRBV7-1A0A0A6YYK4 115 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 TRAV12-3A0A0B4J271 114 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 G3V318 75 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 J3QLW9 94 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 SPRR1AP35321 89 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 SPRR2AP35326 72 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 KRTAP6-2Q3LI66 62 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 SLC48A1Q6P1K1 146 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 CNFNQ9BYD5 112 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 PPRC1Q5VV67 1664 aaKnown RBP-0.57□□□□□ -2.5
PATL1-202ENST00000531919 RYR3Q15413 4870 aa-0.57□□□□□ -2.5
PATL1-202ENST00000531919 PCNX1Q96RV3 2341 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 TRGV1A0A0A0MS02 117 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 CLPSL1A2RUU4 121 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 TMEM14DPA8MWL7 114 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 TSTD3H0UI37 97 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 CCDC179H3BU77 68 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 DEGS1O15121 323 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 SMIM24O75264 130 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 RBP4P02753 201 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 SPRR2EP22531 72 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 RBM3P98179 157 aaKnown RBP-0.58□□□□□ -2.5
PATL1-202ENST00000531919 SPAG11BQ08648 103 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 INSL4Q14641 139 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 SMIM15Q7Z3B0 74 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 TCTE3Q8IZS6 198 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 DNAH6Q9C0G6 4158 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 ADGRB1O14514 1584 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 SETD2Q9BYW2 2564 aaPredicted RBP-0.58□□□□□ -2.5
PATL1-202ENST00000531919 DNAJC13O75165 2243 aa-0.58□□□□□ -2.5
PATL1-202ENST00000531919 HYDINQ4G0P3 5121 aa-0.59□□□□□ -2.5
PATL1-202ENST00000531919 M0R3E3 92 aa-0.59□□□□□ -2.5
PATL1-202ENST00000531919 ACYP2P14621 99 aa-0.59□□□□□ -2.5
PATL1-202ENST00000531919 SPCS2Q15005 226 aa-0.59□□□□□ -2.5
PATL1-202ENST00000531919 LINC01545Q5VT33 79 aa-0.59□□□□□ -2.5
PATL1-202ENST00000531919 V9GYV3 84 aa-0.59□□□□□ -2.5
PATL1-202ENST00000531919 RYR1P21817 5038 aa-0.59□□□□□ -2.5
PATL1-202ENST00000531919 MYH9P35579 1960 aaKnown RBP-0.59□□□□□ -2.5
PATL1-202ENST00000531919 MUC17Q685J3 4493 aa-0.6□□□□□ -2.5
PATL1-202ENST00000531919 UBR4Q5T4S7 5183 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 IFT172Q9UG01 1749 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 BORCS7-ASMTA0A0B4J1R7 106 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 A0A0D9SFI3 127 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 ZNF815PA8K554 130 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 YPEL1O60688 119 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 MORN2Q502X0 79 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 SSBP3-AS1Q7Z2R9 100 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 Q8IZM0 81 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 NDUFA12Q9UI09 145 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 HSPB11Q9Y547 144 aa-0.6□□□□□ -2.51
PATL1-202ENST00000531919 BCL9LQ86UU0 1499 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 CDK5RAP2Q96SN8 1893 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 GOLGA4Q13439 2230 aaKnown RBP-0.61□□□□□ -2.51
PATL1-202ENST00000531919 HIVEP1P15822 2718 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 EPG5Q9HCE0 2579 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 SPINK8P0C7L1 97 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 CMPK1P30085 196 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 FAM74A4Q5TZK3 123 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 C10orf82Q8WW14 230 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 MAGOHBQ96A72 148 aaKnown RBP-0.61□□□□□ -2.51
PATL1-202ENST00000531919 ZMYM4Q5VZL5 1548 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 IBTKQ9P2D0 1353 aaPredicted RBP-0.61□□□□□ -2.51
PATL1-202ENST00000531919 PLXNB2O15031 1838 aa-0.61□□□□□ -2.51
PATL1-202ENST00000531919 PKD1P98161 4303 aa-0.62□□□□□ -2.51
PATL1-202ENST00000531919 LAMC1P11047 1609 aa-0.62□□□□□ -2.51
PATL1-202ENST00000531919 TRBV20-1A0A075B6N2 111 aa-0.62□□□□□ -2.51
PATL1-202ENST00000531919 H0YJX3 145 aa-0.62□□□□□ -2.51
PATL1-202ENST00000531919 PITX3O75364 302 aa-0.62□□□□□ -2.51
PATL1-202ENST00000531919 GCHFRP30047 84 aa-0.62□□□□□ -2.51
PATL1-202ENST00000531919 PRO0255Q9UI72 69 aa-0.62□□□□□ -2.51
PATL1-202ENST00000531919 SCP2D1Q9UJQ7 156 aa-0.62□□□□□ -2.51
PATL1-202ENST00000531919 VPS13DQ5THJ4 4388 aa-0.62□□□□□ -2.51
PATL1-202ENST00000531919 TACC2O95359 2948 aa-0.63□□□□□ -2.51
PATL1-202ENST00000531919 ITPR3Q14573 2671 aa-0.63□□□□□ -2.51
PATL1-202ENST00000531919 TRBV10-3A0A0K0K1G6 114 aa-0.63□□□□□ -2.51
PATL1-202ENST00000531919 GNG14A0A1W2PPG7 69 aa-0.63□□□□□ -2.51
PATL1-202ENST00000531919 K7EQZ3 153 aa-0.63□□□□□ -2.51
PATL1-202ENST00000531919 UBE2D1P51668 147 aa-0.63□□□□□ -2.51
PATL1-202ENST00000531919 Q5VV11 94 aa-0.63□□□□□ -2.51
PATL1-202ENST00000531919 UBE2DNLQ8IWF7 75 aa-0.63□□□□□ -2.51
PATL1-202ENST00000531919 WFDC6Q9BQY6 131 aa-0.63□□□□□ -2.51
PATL1-202ENST00000531919 BATF3Q9NR55 127 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms