RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 TGIF2-C20orf24A0A0A6YYL0 155 aa12.33□□□□□ -0.44
SCN4B-205ENST00000531550 MUC21A0A0G2JKD1 596 aa12.33□□□□□ -0.44
SCN4B-205ENST00000531550 MUC21A0A140T8X8 626 aa12.33□□□□□ -0.44
SCN4B-205ENST00000531550 COLCA2A8K830 154 aa12.33□□□□□ -0.44
SCN4B-205ENST00000531550 S100A8P05109 93 aa12.33□□□□□ -0.44
SCN4B-205ENST00000531550 COX19Q49B96 90 aa12.33□□□□□ -0.44
SCN4B-205ENST00000531550 DMRTA1Q5VZB9 504 aa12.33□□□□□ -0.44
SCN4B-205ENST00000531550 MRPL54Q6P161 138 aaKnown RBP12.33□□□□□ -0.44
SCN4B-205ENST00000531550 RASL10AQ92737 203 aa12.33□□□□□ -0.44
SCN4B-205ENST00000531550 A0A096LPF7 62 aa12.32□□□□□ -0.44
SCN4B-205ENST00000531550 M0R381 172 aa12.32□□□□□ -0.44
SCN4B-205ENST00000531550 HBBP68871 147 aa12.32□□□□□ -0.44
SCN4B-205ENST00000531550 TWIST1Q15672 202 aa12.32□□□□□ -0.44
SCN4B-205ENST00000531550 ZNF876PQ49A33 203 aa12.32□□□□□ -0.44
SCN4B-205ENST00000531550 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
SCN4B-205ENST00000531550 KRTAP10-1P60331 282 aa12.31□□□□□ -0.44
SCN4B-205ENST00000531550 VSIG2Q96IQ7 327 aa12.31□□□□□ -0.44
SCN4B-205ENST00000531550 MSRB1Q9NZV6 116 aa12.31□□□□□ -0.44
SCN4B-205ENST00000531550 SIVA1O15304 175 aa12.3□□□□□ -0.44
SCN4B-205ENST00000531550 TRGC1P0CF51 173 aa12.3□□□□□ -0.44
SCN4B-205ENST00000531550 SSTP61278 116 aa12.3□□□□□ -0.44
SCN4B-205ENST00000531550 C18orf15Q96N68 181 aa12.3□□□□□ -0.44
SCN4B-205ENST00000531550 DNAH10OSP0CZ25 163 aa12.29□□□□□ -0.44
SCN4B-205ENST00000531550 CAMPP49913 170 aa12.29□□□□□ -0.44
SCN4B-205ENST00000531550 GNB1LQ9BYB4 327 aa12.29□□□□□ -0.44
SCN4B-205ENST00000531550 TMEM191AQ9H0A3 160 aa12.29□□□□□ -0.44
SCN4B-205ENST00000531550 TRGV1A0A0A0MS02 117 aa12.28□□□□□ -0.44
SCN4B-205ENST00000531550 A8MWV9 139 aa12.28□□□□□ -0.44
SCN4B-205ENST00000531550 SMR3BP02814 79 aaPredicted RBP12.28□□□□□ -0.44
SCN4B-205ENST00000531550 Q6ZTI0 123 aa12.28□□□□□ -0.44
SCN4B-205ENST00000531550 SMIM15Q7Z3B0 74 aa12.28□□□□□ -0.44
SCN4B-205ENST00000531550 AP1S3Q96PC3 154 aa12.28□□□□□ -0.44
SCN4B-205ENST00000531550 MRPL16Q9NX20 251 aaKnown RBP12.28□□□□□ -0.44
SCN4B-205ENST00000531550 TNFRSF18Q9Y5U5 241 aa12.28□□□□□ -0.44
SCN4B-205ENST00000531550 A0A087WTM6 91 aa12.27□□□□□ -0.45
SCN4B-205ENST00000531550 RS1O15537 224 aa12.27□□□□□ -0.45
SCN4B-205ENST00000531550 TMEM136Q6ZRR5 245 aa12.27□□□□□ -0.45
SCN4B-205ENST00000531550 FLG2Q5D862 2391 aaPredicted RBP12.26□□□□□ -0.45
SCN4B-205ENST00000531550 HLA-DQA1P01909 254 aa12.26□□□□□ -0.45
SCN4B-205ENST00000531550 MT-ND6P03923 174 aa12.26□□□□□ -0.45
SCN4B-205ENST00000531550 RAB5AP20339 215 aa12.26□□□□□ -0.45
SCN4B-205ENST00000531550 EVI2AP22794 236 aa12.26□□□□□ -0.45
SCN4B-205ENST00000531550 DPH3P1Q9H4G8 78 aa12.26□□□□□ -0.45
SCN4B-205ENST00000531550 KIF25-AS1Q9Y6Z4 181 aa12.26□□□□□ -0.45
SCN4B-205ENST00000531550 CIDEAO60543 219 aa12.25□□□□□ -0.45
SCN4B-205ENST00000531550 CRYGDP07320 174 aa12.25□□□□□ -0.45
SCN4B-205ENST00000531550 RAB4BP61018 213 aa12.25□□□□□ -0.45
SCN4B-205ENST00000531550 NFE4Q86UQ8 179 aa12.25□□□□□ -0.45
SCN4B-205ENST00000531550 JPT2Q9H910 190 aa12.25□□□□□ -0.45
SCN4B-205ENST00000531550 SRRM2Q9UQ35 2752 aaKnown RBP12.25□□□□□ -0.45
SCN4B-205ENST00000531550 TRGV2A0A075B6R0 118 aa12.24□□□□□ -0.45
SCN4B-205ENST00000531550 TRAV4A0A0B4J268 109 aa12.24□□□□□ -0.45
SCN4B-205ENST00000531550 SMIM17P0DL12 118 aa12.24□□□□□ -0.45
SCN4B-205ENST00000531550 CFAP126Q5VTH2 177 aa12.24□□□□□ -0.45
SCN4B-205ENST00000531550 FAM104BQ5XKR9 115 aa12.24□□□□□ -0.45
SCN4B-205ENST00000531550 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
SCN4B-205ENST00000531550 FAM229AH3BQW9 127 aa12.23□□□□□ -0.45
SCN4B-205ENST00000531550 RHODO00212 210 aa12.23□□□□□ -0.45
SCN4B-205ENST00000531550 RPS10P46783 165 aaKnown RBP12.23□□□□□ -0.45
SCN4B-205ENST00000531550 HAMPP81172 84 aa12.23□□□□□ -0.45
SCN4B-205ENST00000531550 UFSP1Q6NVU6 142 aa12.23□□□□□ -0.45
SCN4B-205ENST00000531550 ZFP2Q6ZN57 461 aa12.23□□□□□ -0.45
SCN4B-205ENST00000531550 Q6ZSN1 163 aa12.23□□□□□ -0.45
SCN4B-205ENST00000531550 SAMD10Q9BYL1 202 aa12.23□□□□□ -0.45
SCN4B-205ENST00000531550 RAB4AP20338 218 aa12.22□□□□□ -0.45
SCN4B-205ENST00000531550 GCSHP23434 173 aa12.22□□□□□ -0.45
SCN4B-205ENST00000531550 OR4C5Q8NGB2 326 aa12.22□□□□□ -0.45
SCN4B-205ENST00000531550 RNF185Q96GF1 192 aa12.22□□□□□ -0.45
SCN4B-205ENST00000531550 TRAPPC1Q9Y5R8 145 aa12.22□□□□□ -0.45
SCN4B-205ENST00000531550 ICOSQ9Y6W8 199 aa12.22□□□□□ -0.45
SCN4B-205ENST00000531550 A0A087WWL8 130 aa12.21□□□□□ -0.45
SCN4B-205ENST00000531550 J3QL48 77 aa12.21□□□□□ -0.45
SCN4B-205ENST00000531550 AMN1Q8IY45 258 aa12.21□□□□□ -0.45
SCN4B-205ENST00000531550 MRPL18Q9H0U6 180 aaKnown RBP12.21□□□□□ -0.45
SCN4B-205ENST00000531550 APCSP02743 223 aa12.2□□□□□ -0.46
SCN4B-205ENST00000531550 SLAQ13239 276 aa12.2□□□□□ -0.46
SCN4B-205ENST00000531550 PAX4O43316 350 aa12.19□□□□□ -0.46
SCN4B-205ENST00000531550 FABP9Q0Z7S8 132 aa12.19□□□□□ -0.46
SCN4B-205ENST00000531550 MRPL51Q4U2R6 128 aaKnown RBP12.19□□□□□ -0.46
SCN4B-205ENST00000531550 FAM74A4Q5TZK3 123 aa12.19□□□□□ -0.46
SCN4B-205ENST00000531550 ZNF479Q96JC4 524 aa12.19□□□□□ -0.46
SCN4B-205ENST00000531550 MGPP08493 103 aa12.18□□□□□ -0.46
SCN4B-205ENST00000531550 LYPD5Q6UWN5 251 aa12.18□□□□□ -0.46
SCN4B-205ENST00000531550 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.18□□□□□ -0.46
SCN4B-205ENST00000531550 MRAP2Q96G30 205 aa12.18□□□□□ -0.46
SCN4B-205ENST00000531550 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
SCN4B-205ENST00000531550 PPBPP02775 128 aa12.17□□□□□ -0.46
SCN4B-205ENST00000531550 TRGC2P03986 189 aa12.17□□□□□ -0.46
SCN4B-205ENST00000531550 F5H697 171 aa12.16□□□□□ -0.46
SCN4B-205ENST00000531550 PHOX2AO14813 284 aa12.16□□□□□ -0.46
SCN4B-205ENST00000531550 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
SCN4B-205ENST00000531550 FHL2Q14192 279 aa12.16□□□□□ -0.46
SCN4B-205ENST00000531550 ZNF56Q15929 161 aa12.16□□□□□ -0.46
SCN4B-205ENST00000531550 TMEM70Q9BUB7 260 aa12.16□□□□□ -0.46
SCN4B-205ENST00000531550 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
SCN4B-205ENST00000531550 DNAH8Q96JB1 4490 aa12.15□□□□□ -0.46
SCN4B-205ENST00000531550 IGHV3-73A0A0B4J1V6 119 aa12.15□□□□□ -0.46
SCN4B-205ENST00000531550 CKS2P33552 79 aa12.15□□□□□ -0.46
SCN4B-205ENST00000531550 KIAA1644Q3SXP7 199 aa12.15□□□□□ -0.46
SCN4B-205ENST00000531550 SUMO4Q6EEV6 95 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms