RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 Q9HAA7 133 aa9.75□□□□□ -0.85
FOXR1-202ENST00000531539 CTRLP40313 264 aa9.74□□□□□ -0.85
FOXR1-202ENST00000531539 FAM74A3Q4VXF1 159 aa9.74□□□□□ -0.85
FOXR1-202ENST00000531539 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
FOXR1-202ENST00000531539 DAZ4Q86SG3 579 aaKnown RBP9.74□□□□□ -0.85
FOXR1-202ENST00000531539 DAZ3Q9NR90 486 aaKnown RBP9.74□□□□□ -0.85
FOXR1-202ENST00000531539 PKD1P98161 4303 aa9.74□□□□□ -0.85
FOXR1-202ENST00000531539 TMEM262E9PQX1 116 aa9.73□□□□□ -0.85
FOXR1-202ENST00000531539 H7C1H1 209 aa9.73□□□□□ -0.85
FOXR1-202ENST00000531539 M0QY20 66 aa9.73□□□□□ -0.85
FOXR1-202ENST00000531539 EREGO14944 169 aa9.73□□□□□ -0.85
FOXR1-202ENST00000531539 OSTCQ9NRP0 149 aa9.73□□□□□ -0.85
FOXR1-202ENST00000531539 URGCP-MRPS24S4R325 110 aa9.73□□□□□ -0.85
FOXR1-202ENST00000531539 C16orf90A8MZG2 172 aa9.72□□□□□ -0.85
FOXR1-202ENST00000531539 PSCAO43653 123 aa9.72□□□□□ -0.85
FOXR1-202ENST00000531539 FOXA3P55318 350 aaPredicted RBP9.72□□□□□ -0.85
FOXR1-202ENST00000531539 SMIM15Q7Z3B0 74 aa9.72□□□□□ -0.85
FOXR1-202ENST00000531539 NIT1Q86X76 327 aa9.72□□□□□ -0.85
FOXR1-202ENST00000531539 C15orf54Q8N8G6 183 aa9.72□□□□□ -0.85
FOXR1-202ENST00000531539 DNAJC30Q96LL9 226 aa9.72□□□□□ -0.85
FOXR1-202ENST00000531539 CNFNQ9BYD5 112 aa9.72□□□□□ -0.85
FOXR1-202ENST00000531539 A0A087WX48 190 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 TRBV6-8A0A0A6YYG3 113 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 KRTAP10-2P60368 255 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 RAB14P61106 215 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 RPL23P62829 140 aaKnown RBP9.71□□□□□ -0.86
FOXR1-202ENST00000531539 ADIRFQ15847 76 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 CT83Q5H943 113 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 KCNIP4Q6PIL6 250 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 RASL11AQ6T310 242 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 TSKUQ8WUA8 353 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 BORCS7Q96B45 105 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 SMDT1Q9H4I9 107 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 NAT8Q9UHE5 227 aa9.71□□□□□ -0.86
FOXR1-202ENST00000531539 ISOC2Q96AB3 205 aa9.7□□□□□ -0.86
FOXR1-202ENST00000531539 CHCHD5Q9BSY4 110 aa9.7□□□□□ -0.86
FOXR1-202ENST00000531539 NIT2Q9NQR4 276 aa9.7□□□□□ -0.86
FOXR1-202ENST00000531539 KLK12Q9UKR0 248 aa9.7□□□□□ -0.86
FOXR1-202ENST00000531539 A0A087WTM6 91 aa9.69□□□□□ -0.86
FOXR1-202ENST00000531539 TMEM97Q5BJF2 176 aa9.69□□□□□ -0.86
FOXR1-202ENST00000531539 NTM-AS1Q6ZSK4 140 aa9.69□□□□□ -0.86
FOXR1-202ENST00000531539 V9GYV3 84 aa9.69□□□□□ -0.86
FOXR1-202ENST00000531539 TRAV8-3A0A0A6YYJ7 113 aa9.68□□□□□ -0.86
FOXR1-202ENST00000531539 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
FOXR1-202ENST00000531539 HIGD1CA8MV81 97 aa9.68□□□□□ -0.86
FOXR1-202ENST00000531539 FUSP35637 526 aaKnown RBP eCLIP9.68□□□□□ -0.86
FOXR1-202ENST00000531539 GATD1Q8NB37 220 aa9.68□□□□□ -0.86
FOXR1-202ENST00000531539 DEFB104AQ8WTQ1 72 aa9.68□□□□□ -0.86
FOXR1-202ENST00000531539 TM2D2Q9BX73 214 aa9.68□□□□□ -0.86
FOXR1-202ENST00000531539 GFRA4Q9GZZ7 299 aa9.68□□□□□ -0.86
FOXR1-202ENST00000531539 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
FOXR1-202ENST00000531539 A0A1B0GUT8 65 aa9.67□□□□□ -0.86
FOXR1-202ENST00000531539 FAM231BA6NCW3 169 aa9.67□□□□□ -0.86
FOXR1-202ENST00000531539 LAGE3Q14657 143 aa9.67□□□□□ -0.86
FOXR1-202ENST00000531539 ELOBQ15370 118 aa9.67□□□□□ -0.86
FOXR1-202ENST00000531539 DNAH11Q96DT5 4516 aa9.66□□□□□ -0.86
FOXR1-202ENST00000531539 KIAA1109Q2LD37 5005 aa9.66□□□□□ -0.86
FOXR1-202ENST00000531539 TRBV25-1A0A075B6N4 114 aa9.66□□□□□ -0.86
FOXR1-202ENST00000531539 GAGE6Q13070 117 aa9.66□□□□□ -0.86
FOXR1-202ENST00000531539 UBE2WQ96B02 151 aa9.66□□□□□ -0.86
FOXR1-202ENST00000531539 CHCHD7Q9BUK0 85 aa9.66□□□□□ -0.86
FOXR1-202ENST00000531539 IGHV1-24A0A0C4DH33 117 aa9.65□□□□□ -0.86
FOXR1-202ENST00000531539 RIGQ13278 110 aa9.65□□□□□ -0.86
FOXR1-202ENST00000531539 ATRAIDQ6UW56 229 aa9.65□□□□□ -0.86
FOXR1-202ENST00000531539 NUP35Q8NFH5 326 aa9.65□□□□□ -0.86
FOXR1-202ENST00000531539 DYNC1H1Q14204 4646 aaKnown RBP9.65□□□□□ -0.86
FOXR1-202ENST00000531539 IGKV2D-24A0A075B6R9 120 aa9.64□□□□□ -0.87
FOXR1-202ENST00000531539 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
FOXR1-202ENST00000531539 ANGP03950 147 aaKnown RBP9.64□□□□□ -0.87
FOXR1-202ENST00000531539 PKIAP61925 76 aa9.64□□□□□ -0.87
FOXR1-202ENST00000531539 MPV17L2Q567V2 206 aa9.64□□□□□ -0.87
FOXR1-202ENST00000531539 Q8N976 141 aa9.64□□□□□ -0.87
FOXR1-202ENST00000531539 RMI2Q96E14 147 aa9.64□□□□□ -0.87
FOXR1-202ENST00000531539 RPL39LQ96EH5 51 aaKnown RBP9.64□□□□□ -0.87
FOXR1-202ENST00000531539 NAT8BQ9UHF3 227 aa9.64□□□□□ -0.87
FOXR1-202ENST00000531539 PKHD1P08F94 4074 aa9.64□□□□□ -0.87
FOXR1-202ENST00000531539 IQCJQ1A5X6 159 aa9.63□□□□□ -0.87
FOXR1-202ENST00000531539 FRZBQ92765 325 aa9.63□□□□□ -0.87
FOXR1-202ENST00000531539 TMEM191AQ9H0A3 160 aa9.63□□□□□ -0.87
FOXR1-202ENST00000531539 RAB4AP20338 218 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 RBX1P62877 108 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 IFITM2Q01629 132 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 Q0VG73 95 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 COTL1Q14019 142 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 CLLU1Q5K131 121 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 ENHOQ6UWT2 76 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 BAALCQ8WXS3 180 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 TMEM243Q9BU79 118 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 COX11Q9Y6N1 276 aa9.62□□□□□ -0.87
FOXR1-202ENST00000531539 HERC2O95714 4834 aa9.61□□□□□ -0.87
FOXR1-202ENST00000531539 SMIM27A0A1W2PRY6 76 aa9.61□□□□□ -0.87
FOXR1-202ENST00000531539 LECT2O14960 151 aa9.61□□□□□ -0.87
FOXR1-202ENST00000531539 GAS8-AS1O95177 125 aa9.61□□□□□ -0.87
FOXR1-202ENST00000531539 MAPKAPK5-AS1Q8N8E1 139 aa9.61□□□□□ -0.87
FOXR1-202ENST00000531539 CRPP02741 224 aa9.6□□□□□ -0.87
FOXR1-202ENST00000531539 PMCHP20382 165 aa9.6□□□□□ -0.87
FOXR1-202ENST00000531539 AMTP48728 403 aa9.6□□□□□ -0.87
FOXR1-202ENST00000531539 CAMPP49913 170 aa9.6□□□□□ -0.87
FOXR1-202ENST00000531539 CDPF1Q6NVV7 123 aa9.6□□□□□ -0.87
FOXR1-202ENST00000531539 AMN1Q8IY45 258 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms