RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 GAGE5Q13069 117 aa11.72□□□□□ -0.53
SF3B2-211ENST00000531041 GAGE13Q4V321 117 aa11.72□□□□□ -0.53
SF3B2-211ENST00000531041 ZNRF2Q8NHG8 242 aa11.72□□□□□ -0.53
SF3B2-211ENST00000531041 MRAP2Q96G30 205 aa11.72□□□□□ -0.53
SF3B2-211ENST00000531041 DNAJC30Q96LL9 226 aa11.72□□□□□ -0.53
SF3B2-211ENST00000531041 TRAV26-2A0A0B4J265 109 aa11.71□□□□□ -0.53
SF3B2-211ENST00000531041 ELOBQ15370 118 aa11.71□□□□□ -0.53
SF3B2-211ENST00000531041 NIT2Q9NQR4 276 aa11.71□□□□□ -0.53
SF3B2-211ENST00000531041 PLECQ15149 4684 aaKnown RBP11.71□□□□□ -0.54
SF3B2-211ENST00000531041 UBE2D3P61077 147 aa11.7□□□□□ -0.54
SF3B2-211ENST00000531041 UBE2D2P62837 147 aa11.7□□□□□ -0.54
SF3B2-211ENST00000531041 ESRGQ1W209 222 aa11.7□□□□□ -0.54
SF3B2-211ENST00000531041 MRPL51Q4U2R6 128 aaKnown RBP11.7□□□□□ -0.54
SF3B2-211ENST00000531041 LGALS9CQ6DKI2 356 aa11.7□□□□□ -0.54
SF3B2-211ENST00000531041 ATP6V0E2Q8NHE4 81 aa11.7□□□□□ -0.54
SF3B2-211ENST00000531041 TRBV24-1A0A075B6N3 115 aa11.69□□□□□ -0.54
SF3B2-211ENST00000531041 CCL18P55774 89 aa11.69□□□□□ -0.54
SF3B2-211ENST00000531041 LYPD5Q6UWN5 251 aa11.69□□□□□ -0.54
SF3B2-211ENST00000531041 SMCO4Q9NRQ5 59 aa11.69□□□□□ -0.54
SF3B2-211ENST00000531041 TIRAPP58753 221 aa11.69□□□□□ -0.54
SF3B2-211ENST00000531041 COX19Q49B96 90 aa11.69□□□□□ -0.54
SF3B2-211ENST00000531041 TMEM136Q6ZRR5 245 aa11.69□□□□□ -0.54
SF3B2-211ENST00000531041 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
SF3B2-211ENST00000531041 LINC00476Q8WZB0 136 aa11.68□□□□□ -0.54
SF3B2-211ENST00000531041 YPEL4Q96NS1 127 aa11.68□□□□□ -0.54
SF3B2-211ENST00000531041 GNB1LQ9BYB4 327 aa11.68□□□□□ -0.54
SF3B2-211ENST00000531041 GTSF1LQ9H1H1 148 aa11.68□□□□□ -0.54
SF3B2-211ENST00000531041 TGIF2-C20orf24A0A0A6YYL0 155 aa11.67□□□□□ -0.54
SF3B2-211ENST00000531041 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
SF3B2-211ENST00000531041 PPP1R17O96001 155 aa11.67□□□□□ -0.54
SF3B2-211ENST00000531041 PPBPP02775 128 aa11.67□□□□□ -0.54
SF3B2-211ENST00000531041 CBLN2Q8IUK8 224 aa11.67□□□□□ -0.54
SF3B2-211ENST00000531041 RPL39LQ96EH5 51 aaKnown RBP11.67□□□□□ -0.54
SF3B2-211ENST00000531041 LINC00588Q9Y4M8 146 aa11.67□□□□□ -0.54
SF3B2-211ENST00000531041 TRBV6-5A0A0K0K1A5 114 aa11.66□□□□□ -0.54
SF3B2-211ENST00000531041 ATP6V1G1O75348 118 aa11.66□□□□□ -0.54
SF3B2-211ENST00000531041 HLA-DQA1P01909 254 aa11.66□□□□□ -0.54
SF3B2-211ENST00000531041 S100A1P23297 94 aa11.66□□□□□ -0.54
SF3B2-211ENST00000531041 CKS2P33552 79 aa11.66□□□□□ -0.54
SF3B2-211ENST00000531041 RPS10P46783 165 aaKnown RBP11.66□□□□□ -0.54
SF3B2-211ENST00000531041 OR10J3Q5JRS4 329 aa11.66□□□□□ -0.54
SF3B2-211ENST00000531041 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
SF3B2-211ENST00000531041 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
SF3B2-211ENST00000531041 LYSTQ99698 3801 aa11.65□□□□□ -0.54
SF3B2-211ENST00000531041 SMKR1H3BMG3 65 aa11.65□□□□□ -0.54
SF3B2-211ENST00000531041 NCR2O95944 276 aa11.65□□□□□ -0.54
SF3B2-211ENST00000531041 UBE2DNLQ8IWF7 75 aa11.65□□□□□ -0.54
SF3B2-211ENST00000531041 NRACQ8N912 160 aa11.65□□□□□ -0.54
SF3B2-211ENST00000531041 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.65□□□□□ -0.54
SF3B2-211ENST00000531041 MRPS16Q9Y3D3 137 aaKnown RBP11.65□□□□□ -0.54
SF3B2-211ENST00000531041 D6R8Y8 96 aa11.64□□□□□ -0.55
SF3B2-211ENST00000531041 LY6G6CO95867 125 aa11.64□□□□□ -0.55
SF3B2-211ENST00000531041 MT-ND6P03923 174 aa11.64□□□□□ -0.55
SF3B2-211ENST00000531041 ORMDL3Q8N138 153 aa11.64□□□□□ -0.55
SF3B2-211ENST00000531041 UPK3BQ9BT76 320 aa11.64□□□□□ -0.55
SF3B2-211ENST00000531041 ST20Q9HBF5 79 aa11.63□□□□□ -0.55
SF3B2-211ENST00000531041 IGHV3-38A0A0C4DH36 116 aa11.62□□□□□ -0.55
SF3B2-211ENST00000531041 LCE6AA0A183 80 aa11.62□□□□□ -0.55
SF3B2-211ENST00000531041 SDHAF1A6NFY7 115 aa11.62□□□□□ -0.55
SF3B2-211ENST00000531041 PHOX2AO14813 284 aa11.62□□□□□ -0.55
SF3B2-211ENST00000531041 TMEM97Q5BJF2 176 aa11.62□□□□□ -0.55
SF3B2-211ENST00000531041 LELP1Q5T871 98 aa11.62□□□□□ -0.55
SF3B2-211ENST00000531041 TNFRSF6BO95407 300 aa11.61□□□□□ -0.55
SF3B2-211ENST00000531041 APCSP02743 223 aa11.61□□□□□ -0.55
SF3B2-211ENST00000531041 POLR2KP53803 58 aaKnown RBP11.61□□□□□ -0.55
SF3B2-211ENST00000531041 C20orf78Q9BR46 151 aa11.61□□□□□ -0.55
SF3B2-211ENST00000531041 TMEM70Q9BUB7 260 aa11.61□□□□□ -0.55
SF3B2-211ENST00000531041 SUMO2P61956 95 aaKnown RBP11.6□□□□□ -0.55
SF3B2-211ENST00000531041 PRELID3AQ96N28 172 aa11.6□□□□□ -0.55
SF3B2-211ENST00000531041 LAMTOR2Q9Y2Q5 125 aa11.6□□□□□ -0.55
SF3B2-211ENST00000531041 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
SF3B2-211ENST00000531041 NPYP01303 97 aa11.6□□□□□ -0.55
SF3B2-211ENST00000531041 NTM-AS1Q6ZSK4 140 aa11.6□□□□□ -0.55
SF3B2-211ENST00000531041 MRPL18Q9H0U6 180 aaKnown RBP11.6□□□□□ -0.55
SF3B2-211ENST00000531041 TRAV8-6A0A0B4J262 113 aa11.59□□□□□ -0.55
SF3B2-211ENST00000531041 TRBV27A0A0K0K1C4 114 aa11.59□□□□□ -0.55
SF3B2-211ENST00000531041 I3L3M4 83 aa11.59□□□□□ -0.55
SF3B2-211ENST00000531041 SCO1O75880 301 aa11.59□□□□□ -0.55
SF3B2-211ENST00000531041 RPL32P62910 135 aaKnown RBP11.59□□□□□ -0.55
SF3B2-211ENST00000531041 Q9H8V8 135 aa11.59□□□□□ -0.55
SF3B2-211ENST00000531041 ALMS1Q8TCU4 4167 aa11.58□□□□□ -0.56
SF3B2-211ENST00000531041 VCYO14598 125 aa11.58□□□□□ -0.56
SF3B2-211ENST00000531041 PMCHP20382 165 aa11.58□□□□□ -0.56
SF3B2-211ENST00000531041 FABP9Q0Z7S8 132 aa11.58□□□□□ -0.56
SF3B2-211ENST00000531041 COTL1Q14019 142 aa11.58□□□□□ -0.56
SF3B2-211ENST00000531041 KIAA1644Q3SXP7 199 aa11.58□□□□□ -0.56
SF3B2-211ENST00000531041 TRAPPC1Q9Y5R8 145 aa11.58□□□□□ -0.56
SF3B2-211ENST00000531041 COLCA2A8K830 154 aa11.57□□□□□ -0.56
SF3B2-211ENST00000531041 PRSS47A8MTI9 375 aa11.57□□□□□ -0.56
SF3B2-211ENST00000531041 SIVA1O15304 175 aa11.57□□□□□ -0.56
SF3B2-211ENST00000531041 IQCJQ1A5X6 159 aa11.57□□□□□ -0.56
SF3B2-211ENST00000531041 WFDC10BQ8IUB3 73 aa11.57□□□□□ -0.56
SF3B2-211ENST00000531041 VPS13DQ5THJ4 4388 aa11.57□□□□□ -0.56
SF3B2-211ENST00000531041 TRBV25-1A0A075B6N4 114 aa11.56□□□□□ -0.56
SF3B2-211ENST00000531041 IGHV1-24A0A0C4DH33 117 aa11.55□□□□□ -0.56
SF3B2-211ENST00000531041 ALKBH7Q9BT30 221 aaPredicted RBP11.55□□□□□ -0.56
SF3B2-211ENST00000531041 SMIM2Q9BVW6 85 aa11.55□□□□□ -0.56
SF3B2-211ENST00000531041 TSHBP01222 138 aa11.54□□□□□ -0.56
SF3B2-211ENST00000531041 DNAH10OSP0CZ25 163 aa11.54□□□□□ -0.56
SF3B2-211ENST00000531041 DEFB104AQ8WTQ1 72 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms