RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 SUMO4Q6EEV6 95 aa10.51□□□□□ -0.73
CCS-206ENST00000530961 NEXN-AS1Q8NBZ9 246 aa10.51□□□□□ -0.73
CCS-206ENST00000530961 FRZBQ92765 325 aa10.51□□□□□ -0.73
CCS-206ENST00000530961 DNAJC30Q96LL9 226 aa10.51□□□□□ -0.73
CCS-206ENST00000530961 TMEM191AQ9H0A3 160 aa10.51□□□□□ -0.73
CCS-206ENST00000530961 HECTD4Q9Y4D8 3996 aa10.51□□□□□ -0.73
CCS-206ENST00000530961 UBE2D3P61077 147 aa10.5□□□□□ -0.73
CCS-206ENST00000530961 UBE2D2P62837 147 aa10.5□□□□□ -0.73
CCS-206ENST00000530961 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
CCS-206ENST00000530961 CTDSP1Q9GZU7 261 aa10.5□□□□□ -0.73
CCS-206ENST00000530961 CARHSP1Q9Y2V2 147 aaKnown RBP10.5□□□□□ -0.73
CCS-206ENST00000530961 A0A087WWC5 75 aa10.49□□□□□ -0.73
CCS-206ENST00000530961 S100A8P05109 93 aa10.49□□□□□ -0.73
CCS-206ENST00000530961 LELP1Q5T871 98 aa10.49□□□□□ -0.73
CCS-206ENST00000530961 RASL11AQ6T310 242 aa10.49□□□□□ -0.73
CCS-206ENST00000530961 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
CCS-206ENST00000530961 IGLV2-18A0A075B6J9 118 aa10.48□□□□□ -0.73
CCS-206ENST00000530961 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
CCS-206ENST00000530961 SIVA1O15304 175 aa10.48□□□□□ -0.73
CCS-206ENST00000530961 ATP5L2Q7Z4Y8 100 aa10.48□□□□□ -0.73
CCS-206ENST00000530961 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
CCS-206ENST00000530961 IMMP2LQ96T52 175 aa10.48□□□□□ -0.73
CCS-206ENST00000530961 NIT2Q9NQR4 276 aa10.48□□□□□ -0.73
CCS-206ENST00000530961 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
CCS-206ENST00000530961 UBR4Q5T4S7 5183 aa10.48□□□□□ -0.73
CCS-206ENST00000530961 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
CCS-206ENST00000530961 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
CCS-206ENST00000530961 NBDYA0A0U1RRE5 68 aa10.46□□□□□ -0.73
CCS-206ENST00000530961 K7EP13 123 aa10.46□□□□□ -0.73
CCS-206ENST00000530961 CAMPP49913 170 aa10.46□□□□□ -0.73
CCS-206ENST00000530961 HBBP68871 147 aa10.46□□□□□ -0.73
CCS-206ENST00000530961 NDUFA5Q16718 116 aa10.46□□□□□ -0.73
CCS-206ENST00000530961 TMEM97Q5BJF2 176 aa10.46□□□□□ -0.73
CCS-206ENST00000530961 OR10J3Q5JRS4 329 aa10.46□□□□□ -0.73
CCS-206ENST00000530961 Q6ZR54 194 aa10.46□□□□□ -0.73
CCS-206ENST00000530961 GATD1Q8NB37 220 aa10.46□□□□□ -0.73
CCS-206ENST00000530961 TRAV9-2A0A087WT02 112 aa10.45□□□□□ -0.74
CCS-206ENST00000530961 A0A1B0GXF2 115 aa10.45□□□□□ -0.74
CCS-206ENST00000530961 M0R2N4 97 aa10.45□□□□□ -0.74
CCS-206ENST00000530961 RAB4AP20338 218 aa10.45□□□□□ -0.74
CCS-206ENST00000530961 RHEBQ15382 184 aa10.45□□□□□ -0.74
CCS-206ENST00000530961 MRPL54Q6P161 138 aaKnown RBP10.45□□□□□ -0.74
CCS-206ENST00000530961 MRAP2Q96G30 205 aa10.45□□□□□ -0.74
CCS-206ENST00000530961 RNF185Q96GF1 192 aa10.45□□□□□ -0.74
CCS-206ENST00000530961 BTF3L4Q96K17 158 aa10.45□□□□□ -0.74
CCS-206ENST00000530961 TRAV26-2A0A0B4J265 109 aa10.44□□□□□ -0.74
CCS-206ENST00000530961 IGHV3-38A0A0C4DH36 116 aa10.44□□□□□ -0.74
CCS-206ENST00000530961 C7orf77A4D0Y5 90 aa10.44□□□□□ -0.74
CCS-206ENST00000530961 DNAH10OSP0CZ25 163 aa10.44□□□□□ -0.74
CCS-206ENST00000530961 FAM104BQ5XKR9 115 aa10.44□□□□□ -0.74
CCS-206ENST00000530961 KCNIP4Q6PIL6 250 aa10.44□□□□□ -0.74
CCS-206ENST00000530961 WFDC10BQ8IUB3 73 aa10.44□□□□□ -0.74
CCS-206ENST00000530961 AMN1Q8IY45 258 aa10.44□□□□□ -0.74
CCS-206ENST00000530961 CLRN3Q8NCR9 226 aa10.44□□□□□ -0.74
CCS-206ENST00000530961 BTF3P20290 206 aaKnown RBP10.43□□□□□ -0.74
CCS-206ENST00000530961 SVBPQ8N300 66 aa10.43□□□□□ -0.74
CCS-206ENST00000530961 KMT2AQ03164 3969 aa10.42□□□□□ -0.74
CCS-206ENST00000530961 TRAV9-1A0A075B6T8 112 aa10.42□□□□□ -0.74
CCS-206ENST00000530961 TRBV6-8A0A0A6YYG3 113 aa10.42□□□□□ -0.74
CCS-206ENST00000530961 SNAPINO95295 136 aa10.42□□□□□ -0.74
CCS-206ENST00000530961 PPP1R17O96001 155 aa10.42□□□□□ -0.74
CCS-206ENST00000530961 APOC3P02656 99 aa10.42□□□□□ -0.74
CCS-206ENST00000530961 LINC01556Q5JQF7 62 aa10.42□□□□□ -0.74
CCS-206ENST00000530961 HERC1Q15751 4861 aa10.41□□□□□ -0.74
CCS-206ENST00000530961 TRBV6-5A0A0K0K1A5 114 aa10.41□□□□□ -0.74
CCS-206ENST00000530961 S100PP25815 95 aa10.41□□□□□ -0.74
CCS-206ENST00000530961 C10orf126Q8N4M7 172 aa10.41□□□□□ -0.74
CCS-206ENST00000530961 RPS10P5Q9NQ39 176 aa10.41□□□□□ -0.74
CCS-206ENST00000530961 C1orf134Q5TEV5 83 aa10.4□□□□□ -0.74
CCS-206ENST00000530961 RPL39LQ96EH5 51 aaKnown RBP10.4□□□□□ -0.74
CCS-206ENST00000530961 PKIAP61925 76 aa10.39□□□□□ -0.75
CCS-206ENST00000530961 MRPL51Q4U2R6 128 aaKnown RBP10.39□□□□□ -0.75
CCS-206ENST00000530961 SLC7A5P1Q8MH63 180 aa10.39□□□□□ -0.75
CCS-206ENST00000530961 ST20Q9HBF5 79 aa10.39□□□□□ -0.75
CCS-206ENST00000530961 DNAH6Q9C0G6 4158 aa10.39□□□□□ -0.75
CCS-206ENST00000530961 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 SDHAF1A6NFY7 115 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 PPBPP02775 128 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 CKS2P33552 79 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 COTL1Q14019 142 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 IQCJQ1A5X6 159 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 NTM-AS1Q6ZSK4 140 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 CHCHD7Q9BUK0 85 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 KRTAP1-5Q9BYS1 174 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 URGCP-MRPS24S4R325 110 aa10.38□□□□□ -0.75
CCS-206ENST00000530961 IGHV1-24A0A0C4DH33 117 aa10.37□□□□□ -0.75
CCS-206ENST00000530961 GAS8-AS1O95177 125 aa10.37□□□□□ -0.75
CCS-206ENST00000530961 RPS10P46783 165 aaKnown RBP10.37□□□□□ -0.75
CCS-206ENST00000530961 NIT1Q86X76 327 aa10.37□□□□□ -0.75
CCS-206ENST00000530961 C6orf223Q8N319 242 aa10.37□□□□□ -0.75
CCS-206ENST00000530961 NACAE9PAV3 2078 aa10.37□□□□□ -0.75
CCS-206ENST00000530961 TRBV24-1A0A075B6N3 115 aa10.36□□□□□ -0.75
CCS-206ENST00000530961 A0A087WX48 190 aa10.36□□□□□ -0.75
CCS-206ENST00000530961 TMEM262E9PQX1 116 aa10.36□□□□□ -0.75
CCS-206ENST00000530961 I3L3M4 83 aa10.36□□□□□ -0.75
CCS-206ENST00000530961 NCR2O95944 276 aa10.36□□□□□ -0.75
CCS-206ENST00000530961 NRACQ8N912 160 aa10.36□□□□□ -0.75
CCS-206ENST00000530961 C20orf78Q9BR46 151 aa10.36□□□□□ -0.75
CCS-206ENST00000530961 CHCHD5Q9BSY4 110 aa10.36□□□□□ -0.75
CCS-206ENST00000530961 TMEM70Q9BUB7 260 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms