RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 UPK3BQ9BT76 320 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 LINC00588Q9Y4M8 146 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 KMT2AQ03164 3969 aa11.06□□□□□ -0.64
BRK1-201ENST00000530758 MGPP08493 103 aa11.05□□□□□ -0.64
BRK1-201ENST00000530758 RAB4AP20338 218 aa11.05□□□□□ -0.64
BRK1-201ENST00000530758 UBE2D3P61077 147 aa11.05□□□□□ -0.64
BRK1-201ENST00000530758 UBE2D2P62837 147 aa11.05□□□□□ -0.64
BRK1-201ENST00000530758 HBBP68871 147 aa11.05□□□□□ -0.64
BRK1-201ENST00000530758 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
BRK1-201ENST00000530758 ATP6V0E2Q8NHE4 81 aa11.05□□□□□ -0.64
BRK1-201ENST00000530758 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
BRK1-201ENST00000530758 RNF185Q96GF1 192 aa11.05□□□□□ -0.64
BRK1-201ENST00000530758 BTF3L4Q96K17 158 aa11.05□□□□□ -0.64
BRK1-201ENST00000530758 GAGE12JA6NER3 117 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 LY6G6CO95867 125 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 GAGE1Q13065 139 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 GAGE4Q13068 117 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 GAGE5Q13069 117 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 FAM104BQ5XKR9 115 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 RASL11AQ6T310 242 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 RPS10P5Q9NQ39 176 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 NIT2Q9NQR4 276 aa11.04□□□□□ -0.64
BRK1-201ENST00000530758 MRPS16Q9Y3D3 137 aaKnown RBP11.04□□□□□ -0.64
BRK1-201ENST00000530758 CAMPP49913 170 aa11.03□□□□□ -0.64
BRK1-201ENST00000530758 MRPL54Q6P161 138 aaKnown RBP11.03□□□□□ -0.64
BRK1-201ENST00000530758 KCNIP4Q6PIL6 250 aa11.03□□□□□ -0.64
BRK1-201ENST00000530758 GTSF1LQ9H1H1 148 aa11.03□□□□□ -0.64
BRK1-201ENST00000530758 AMN1Q8IY45 258 aa11.02□□□□□ -0.65
BRK1-201ENST00000530758 MRAP2Q96G30 205 aa11.02□□□□□ -0.65
BRK1-201ENST00000530758 UBE2DNLQ8IWF7 75 aa11.01□□□□□ -0.65
BRK1-201ENST00000530758 TRAV26-2A0A0B4J265 109 aa11□□□□□ -0.65
BRK1-201ENST00000530758 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
BRK1-201ENST00000530758 S100PP25815 95 aa11□□□□□ -0.65
BRK1-201ENST00000530758 DAZ4Q86SG3 579 aaKnown RBP11□□□□□ -0.65
BRK1-201ENST00000530758 DAZ3Q9NR90 486 aaKnown RBP11□□□□□ -0.65
BRK1-201ENST00000530758 TNFRSF18Q9Y5U5 241 aa11□□□□□ -0.65
BRK1-201ENST00000530758 MRPL51Q4U2R6 128 aaKnown RBP10.99□□□□□ -0.65
BRK1-201ENST00000530758 LELP1Q5T871 98 aa10.99□□□□□ -0.65
BRK1-201ENST00000530758 DNAH10Q8IVF4 4471 aa10.99□□□□□ -0.65
BRK1-201ENST00000530758 ATRAIDQ6UW56 229 aa10.98□□□□□ -0.65
BRK1-201ENST00000530758 Q9H8V8 135 aa10.98□□□□□ -0.65
BRK1-201ENST00000530758 TRBV24-1A0A075B6N3 115 aa10.97□□□□□ -0.65
BRK1-201ENST00000530758 GAS8-AS1O95177 125 aa10.97□□□□□ -0.65
BRK1-201ENST00000530758 PPP1R17O96001 155 aa10.97□□□□□ -0.65
BRK1-201ENST00000530758 TMEM97Q5BJF2 176 aa10.97□□□□□ -0.65
BRK1-201ENST00000530758 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.97□□□□□ -0.65
BRK1-201ENST00000530758 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
BRK1-201ENST00000530758 FRAS1Q86XX4 4008 aa10.96□□□□□ -0.65
BRK1-201ENST00000530758 PPBPP02775 128 aa10.96□□□□□ -0.65
BRK1-201ENST00000530758 ELOBQ15370 118 aa10.96□□□□□ -0.65
BRK1-201ENST00000530758 COX19Q49B96 90 aa10.96□□□□□ -0.65
BRK1-201ENST00000530758 NRACQ8N912 160 aa10.96□□□□□ -0.65
BRK1-201ENST00000530758 URGCP-MRPS24S4R325 110 aa10.96□□□□□ -0.65
BRK1-201ENST00000530758 SIVA1O15304 175 aa10.95□□□□□ -0.66
BRK1-201ENST00000530758 RPS10P46783 165 aaKnown RBP10.95□□□□□ -0.66
BRK1-201ENST00000530758 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
BRK1-201ENST00000530758 OR10J3Q5JRS4 329 aa10.95□□□□□ -0.66
BRK1-201ENST00000530758 TMEM136Q6ZRR5 245 aa10.95□□□□□ -0.66
BRK1-201ENST00000530758 GNB1LQ9BYB4 327 aa10.95□□□□□ -0.66
BRK1-201ENST00000530758 TRBV6-8A0A0A6YYG3 113 aa10.94□□□□□ -0.66
BRK1-201ENST00000530758 TRAV8-6A0A0B4J262 113 aa10.94□□□□□ -0.66
BRK1-201ENST00000530758 K7EP13 123 aa10.94□□□□□ -0.66
BRK1-201ENST00000530758 DNAH10OSP0CZ25 163 aa10.94□□□□□ -0.66
BRK1-201ENST00000530758 CKS2P33552 79 aa10.94□□□□□ -0.66
BRK1-201ENST00000530758 Q6ZR54 194 aa10.94□□□□□ -0.66
BRK1-201ENST00000530758 NTM-AS1Q6ZSK4 140 aa10.94□□□□□ -0.66
BRK1-201ENST00000530758 YPEL4Q96NS1 127 aa10.94□□□□□ -0.66
BRK1-201ENST00000530758 IGHV3-38A0A0C4DH36 116 aa10.93□□□□□ -0.66
BRK1-201ENST00000530758 SDHAF1A6NFY7 115 aa10.93□□□□□ -0.66
BRK1-201ENST00000530758 PHOX2AO14813 284 aa10.93□□□□□ -0.66
BRK1-201ENST00000530758 RPL32P62910 135 aaKnown RBP10.93□□□□□ -0.66
BRK1-201ENST00000530758 WFDC10BQ8IUB3 73 aa10.93□□□□□ -0.66
BRK1-201ENST00000530758 C20orf78Q9BR46 151 aa10.93□□□□□ -0.66
BRK1-201ENST00000530758 TMEM70Q9BUB7 260 aa10.93□□□□□ -0.66
BRK1-201ENST00000530758 ST20Q9HBF5 79 aa10.93□□□□□ -0.66
BRK1-201ENST00000530758 TRBV27A0A0K0K1C4 114 aa10.92□□□□□ -0.66
BRK1-201ENST00000530758 NBDYA0A0U1RRE5 68 aa10.92□□□□□ -0.66
BRK1-201ENST00000530758 PRSS47A8MTI9 375 aa10.92□□□□□ -0.66
BRK1-201ENST00000530758 D6R8Y8 96 aa10.92□□□□□ -0.66
BRK1-201ENST00000530758 SMKR1H3BMG3 65 aa10.92□□□□□ -0.66
BRK1-201ENST00000530758 HLA-DQA1P01909 254 aa10.92□□□□□ -0.66
BRK1-201ENST00000530758 IQCJQ1A5X6 159 aa10.92□□□□□ -0.66
BRK1-201ENST00000530758 I3L3M4 83 aa10.91□□□□□ -0.66
BRK1-201ENST00000530758 TNFRSF6BO95407 300 aa10.91□□□□□ -0.66
BRK1-201ENST00000530758 NCR2O95944 276 aa10.91□□□□□ -0.66
BRK1-201ENST00000530758 SUMO2P61956 95 aaKnown RBP10.91□□□□□ -0.66
BRK1-201ENST00000530758 LINC01556Q5JQF7 62 aa10.91□□□□□ -0.66
BRK1-201ENST00000530758 ORMDL3Q8N138 153 aa10.91□□□□□ -0.66
BRK1-201ENST00000530758 SMCO4Q9NRQ5 59 aa10.91□□□□□ -0.66
BRK1-201ENST00000530758 LAMTOR2Q9Y2Q5 125 aa10.91□□□□□ -0.66
BRK1-201ENST00000530758 TGIF2-C20orf24A0A0A6YYL0 155 aa10.9□□□□□ -0.66
BRK1-201ENST00000530758 MT-ND6P03923 174 aa10.9□□□□□ -0.66
BRK1-201ENST00000530758 BTF3P20290 206 aaKnown RBP10.9□□□□□ -0.66
BRK1-201ENST00000530758 IGLV2-18A0A075B6J9 118 aa10.89□□□□□ -0.67
BRK1-201ENST00000530758 VCYO14598 125 aa10.89□□□□□ -0.67
BRK1-201ENST00000530758 COTL1Q14019 142 aa10.89□□□□□ -0.67
BRK1-201ENST00000530758 TTC32Q5I0X7 151 aa10.89□□□□□ -0.67
BRK1-201ENST00000530758 NIT1Q86X76 327 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms