RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CHCHD5Q9BSY4 110 aa5.74□□□□□ -1.49
VPS11-203ENST00000529545 EPDR1Q9UM22 224 aa5.74□□□□□ -1.49
VPS11-203ENST00000529545 PHLDA3Q9Y5J5 127 aa5.74□□□□□ -1.49
VPS11-203ENST00000529545 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.73□□□□□ -1.49
VPS11-203ENST00000529545 SMLR1H3BR10 107 aa5.73□□□□□ -1.49
VPS11-203ENST00000529545 PANO1I0J062 215 aa5.73□□□□□ -1.49
VPS11-203ENST00000529545 ARMS2P0C7Q2 107 aa5.73□□□□□ -1.49
VPS11-203ENST00000529545 PET100P0DJ07 73 aa5.73□□□□□ -1.49
VPS11-203ENST00000529545 TPT1P13693 172 aaKnown RBP5.73□□□□□ -1.49
VPS11-203ENST00000529545 CDC34P49427 236 aaPredicted RBP5.73□□□□□ -1.49
VPS11-203ENST00000529545 UBE2D3P61077 147 aa5.73□□□□□ -1.49
VPS11-203ENST00000529545 UBE2D2P62837 147 aa5.73□□□□□ -1.49
VPS11-203ENST00000529545 MPV17L2Q567V2 206 aa5.73□□□□□ -1.49
VPS11-203ENST00000529545 SFRP2Q96HF1 295 aa5.73□□□□□ -1.49
VPS11-203ENST00000529545 MED28Q9H204 178 aa5.73□□□□□ -1.49
VPS11-203ENST00000529545 IGHV3-64A0A075B6Q5 118 aa5.72□□□□□ -1.49
VPS11-203ENST00000529545 hDV102S1A0JD36 115 aa5.72□□□□□ -1.49
VPS11-203ENST00000529545 M0R036 132 aa5.72□□□□□ -1.49
VPS11-203ENST00000529545 M0R381 172 aa5.72□□□□□ -1.49
VPS11-203ENST00000529545 GCHFRP30047 84 aa5.72□□□□□ -1.49
VPS11-203ENST00000529545 RPL12P30050 165 aaKnown RBP5.72□□□□□ -1.49
VPS11-203ENST00000529545 CIRBPQ14011 172 aaKnown RBP5.72□□□□□ -1.49
VPS11-203ENST00000529545 DNLZQ5SXM8 178 aa5.72□□□□□ -1.49
VPS11-203ENST00000529545 PPP1R1CQ8WVI7 109 aa5.72□□□□□ -1.49
VPS11-203ENST00000529545 LINC01600Q96MT4 127 aa5.72□□□□□ -1.49
VPS11-203ENST00000529545 TMEM167BQ9NRX6 74 aa5.72□□□□□ -1.49
VPS11-203ENST00000529545 A0A087WYN8 130 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 IFNA7P01567 189 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 STAG3L2P0CL84 134 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 STAG3L3P0CL85 134 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 CNBPP62633 177 aaKnown RBP5.71□□□□□ -1.5
VPS11-203ENST00000529545 TMEM97Q5BJF2 176 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 CLPSL2Q6UWE3 100 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 ZFP82Q8N141 532 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 LINC00269Q8N2A0 174 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 OR10G8Q8NGN5 311 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 CDIP1Q9H305 208 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 ARL2-SNX15V9GYD0 113 aa5.71□□□□□ -1.5
VPS11-203ENST00000529545 TNXBP22105 4242 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 TRAV34A0A0B4J273 112 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 GRIFINA4D1Z8 144 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 HMSDA8MTL9 139 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 KRBOX1C9JBD0 128 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 PHOX2AO14813 284 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 CXorf1O96002 111 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 RAB4BP61018 213 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 RAB24Q969Q5 203 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 PRR34Q9NV39 138 aa5.7□□□□□ -1.5
VPS11-203ENST00000529545 TMA7Q9Y2S6 64 aaKnown RBP5.7□□□□□ -1.5
VPS11-203ENST00000529545 GAS8-AS1O95177 125 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 MBP02144 154 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 GIPP09681 153 aaPredicted RBP5.69□□□□□ -1.5
VPS11-203ENST00000529545 CHTF8P0CG12 524 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 RBX1P62877 108 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 CTAG1AP78358 180 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 GAGE6Q13070 117 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 ZNF56Q15929 161 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 WDR73Q6P4I2 378 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 REG3GQ6UW15 175 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 NEXN-AS1Q8NBZ9 246 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 GTSF1Q8WW33 167 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 WFDC1Q9HC57 220 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 KIF25-AS1Q9Y6Z4 181 aa5.69□□□□□ -1.5
VPS11-203ENST00000529545 IGLV10-54A0A075B6I4 117 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 TRBV25-1A0A075B6N4 114 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 TMSB15BA0A087X1C1 80 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 TRAV8-4A0A0B4J246 113 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 A0A0J9YXV3 536 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 A0A1W2PRE2 83 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 F5H697 171 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 SH2D1AO60880 128 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 P01737 135 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 H2BFSP57053 126 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 REG3AQ06141 175 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 FAM162BQ5T6X4 162 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 KRTAP26-1Q6PEX3 210 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 Q86TA4 180 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 COMMD7Q86VX2 200 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 SPACA4Q8TDM5 124 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 ACTR3CQ9C0K3 210 aaPredicted RBP5.68□□□□□ -1.5
VPS11-203ENST00000529545 PLAC8Q9NZF1 115 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 ZFP30Q9Y2G7 519 aa5.68□□□□□ -1.5
VPS11-203ENST00000529545 PEX7O00628 323 aa5.67□□□□□ -1.5
VPS11-203ENST00000529545 SCO1O75880 301 aa5.67□□□□□ -1.5
VPS11-203ENST00000529545 GZMBP10144 247 aa5.67□□□□□ -1.5
VPS11-203ENST00000529545 CRIP1P50238 77 aa5.67□□□□□ -1.5
VPS11-203ENST00000529545 HIST1H2BAQ96A08 127 aa5.67□□□□□ -1.5
VPS11-203ENST00000529545 PSMG3Q9BT73 122 aaPredicted RBP5.67□□□□□ -1.5
VPS11-203ENST00000529545 DERL1Q9BUN8 251 aa5.67□□□□□ -1.5
VPS11-203ENST00000529545 NKX6-2Q9C056 277 aaPredicted RBP5.67□□□□□ -1.5
VPS11-203ENST00000529545 TRBV6-1A0A0K0K1D8 114 aa5.66□□□□□ -1.5
VPS11-203ENST00000529545 SSNA1O43805 119 aa5.66□□□□□ -1.5
VPS11-203ENST00000529545 UBE2G1P62253 170 aa5.66□□□□□ -1.5
VPS11-203ENST00000529545 PRR3P79522 188 aaKnown RBP5.66□□□□□ -1.5
VPS11-203ENST00000529545 SERF2P84101 59 aa5.66□□□□□ -1.5
VPS11-203ENST00000529545 ODF1Q14990 250 aa5.66□□□□□ -1.5
VPS11-203ENST00000529545 MAJINQ3KP22 176 aa5.66□□□□□ -1.5
VPS11-203ENST00000529545 PRR27Q6MZM9 219 aa5.66□□□□□ -1.5
VPS11-203ENST00000529545 ZNF471Q9BX82 626 aaPredicted RBP5.66□□□□□ -1.5
VPS11-203ENST00000529545 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms