RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 LENEPQ9Y5L5 61 aa2.89□□□□□ -1.95
CSDE1-212ENST00000529046 TRGV2A0A075B6R0 118 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 TRAV12-3A0A0B4J271 114 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 A6NDN8 102 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 PLA2G10O15496 165 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 ORM1P02763 201 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 TCRBP04435 133 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 IL7P13232 177 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 CRYBA4P53673 196 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 LINC00315P59091 139 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 TDRG1Q3Y452 100 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 MIC13Q5XKP0 118 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 Q6AWC8 147 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 LYPD5Q6UWN5 251 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 Q6ZTI0 123 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 NEGR1Q7Z3B1 354 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 ZFAND2AQ8N6M9 145 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 AGPAT4-IT1Q9H0P7 198 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 GSKIPQ9P0R6 139 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 ZNF492Q9P255 531 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 FUT9Q9Y231 359 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 TIMM9Q9Y5J7 89 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 ICOSQ9Y6W8 199 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 DNAH5Q8TE73 4624 aa2.88□□□□□ -1.95
CSDE1-212ENST00000529046 TRGV1A0A0A0MS02 117 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 TRAV5A0A0B4J249 113 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 A0A0J9YY99 117 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 FAM24AA6NFZ4 105 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 M0R3E3 92 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 LYRM1O43325 122 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 CST7O76096 145 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 PTTG1O95997 202 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 C1QBP02746 253 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 GPX1P07203 203 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 NBEAP1P0C6P0 100 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 BAXQ07812 192 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 ZNF266Q14584 549 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 TMEM78Q5T7P6 136 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 STX12Q86Y82 276 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 C10orf126Q8N4M7 172 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 OR10G4Q8NGN3 311 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 FAM167A-AS1Q96KT0 104 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 CCDC32Q9BV29 185 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 NPCDR1Q9BY65 106 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 KCNIP2Q9NS61 270 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 HHLA3Q9XRX5 114 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 LY96Q9Y6Y9 160 aa2.87□□□□□ -1.95
CSDE1-212ENST00000529046 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
CSDE1-212ENST00000529046 HERC1Q15751 4861 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 A0A087WTM6 91 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 CCDC160A6NGH7 325 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 IFNA5P01569 189 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 EVI2AP22794 236 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 CSN1S1P47710 185 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 ZNF138P52744 262 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 KRTAP10-1P60331 282 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 RPL18AQ02543 176 aaKnown RBP2.86□□□□□ -1.95
CSDE1-212ENST00000529046 ERCC8Q13216 396 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 BTN1A1Q13410 526 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 MRPL55Q7Z7F7 128 aaKnown RBP2.86□□□□□ -1.95
CSDE1-212ENST00000529046 MRPL52Q86TS9 123 aaKnown RBP2.86□□□□□ -1.95
CSDE1-212ENST00000529046 PTH2Q96A98 100 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 RNF185Q96GF1 192 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 TXNDC17Q9BRA2 123 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 TMEM70Q9BUB7 260 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 SLC25A2Q9BXI2 301 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 NMES1Q9C002 83 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 WDR61Q9GZS3 305 aaKnown RBP2.86□□□□□ -1.95
CSDE1-212ENST00000529046 SLC25A31Q9H0C2 315 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 LSM5Q9Y4Y9 91 aaKnown RBP2.86□□□□□ -1.95
CSDE1-212ENST00000529046 VPS13BQ7Z7G8 4022 aa2.86□□□□□ -1.95
CSDE1-212ENST00000529046 TRAV4A0A0B4J268 109 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 UBE2L5PA0A1B0GUS4 154 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 IGSF23A1L1A6 192 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 LRCOL1A6NCL2 159 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 C9JCJ5 164 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 C17orf112F2Z3M2 114 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 PYYP10082 97 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 FGF7P21781 194 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 RNASE4P34096 147 aaKnown RBP2.85□□□□□ -1.95
CSDE1-212ENST00000529046 RPS10P46783 165 aaKnown RBP2.85□□□□□ -1.95
CSDE1-212ENST00000529046 TAS2R45P59539 299 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 LINC01556Q5JQF7 62 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 PRR9Q5T870 116 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 FAM19A1Q7Z5A9 133 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 EXOC3-AS1Q8N2X6 119 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 OR5C1Q8NGR4 320 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 FRZBQ92765 325 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 FXYD5Q96DB9 178 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 KCNS1Q96KK3 526 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 SH3BGRL3Q9H299 93 aa2.85□□□□□ -1.95
CSDE1-212ENST00000529046 IGKV2-40A0A087WW87 121 aaPredicted RBP2.84□□□□□ -1.95
CSDE1-212ENST00000529046 TRAV21A0A0B4J279 112 aa2.84□□□□□ -1.95
CSDE1-212ENST00000529046 TRGV4A0A0C4DH28 118 aa2.84□□□□□ -1.95
CSDE1-212ENST00000529046 TRBV6-4A0A1B0GX49 114 aa2.84□□□□□ -1.95
CSDE1-212ENST00000529046 IBA57-AS1B1ANH7 110 aa2.84□□□□□ -1.95
CSDE1-212ENST00000529046 M0R2P5 195 aa2.84□□□□□ -1.95
CSDE1-212ENST00000529046 IGKV2D-40P01614 121 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms