RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 A0A087WTM6 91 aa9.61□□□□□ -0.87
CAPN1-212ENST00000527887 TRAV8-6A0A0B4J262 113 aa9.61□□□□□ -0.87
CAPN1-212ENST00000527887 IGHV3-38A0A0C4DH36 116 aa9.61□□□□□ -0.87
CAPN1-212ENST00000527887 A0A1B0GW15 77 aa9.61□□□□□ -0.87
CAPN1-212ENST00000527887 SLC25A29Q8N8R3 303 aa9.61□□□□□ -0.87
CAPN1-212ENST00000527887 TNFRSF18Q9Y5U5 241 aa9.61□□□□□ -0.87
CAPN1-212ENST00000527887 TGIF2-C20orf24A0A0A6YYL0 155 aa9.6□□□□□ -0.87
CAPN1-212ENST00000527887 RNASE3P12724 160 aaKnown RBP9.6□□□□□ -0.87
CAPN1-212ENST00000527887 LINC01556Q5JQF7 62 aa9.6□□□□□ -0.87
CAPN1-212ENST00000527887 ZFP2Q6ZN57 461 aa9.6□□□□□ -0.87
CAPN1-212ENST00000527887 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.6□□□□□ -0.87
CAPN1-212ENST00000527887 LOC100131303A0A0U1RQF7 123 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 HIGD1CA8MV81 97 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 A8MWV9 139 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 F2Z2F3 143 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 MT-ND6P03923 174 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 S100A4P26447 101 aaKnown RBP9.59□□□□□ -0.87
CAPN1-212ENST00000527887 DNLZQ5SXM8 178 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 WDR73Q6P4I2 378 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 NUP35Q8NFH5 326 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 GNB1LQ9BYB4 327 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 SCRT2Q9NQ03 307 aa9.59□□□□□ -0.87
CAPN1-212ENST00000527887 C1orf196B1AJZ1 125 aa9.58□□□□□ -0.88
CAPN1-212ENST00000527887 S100A8P05109 93 aa9.58□□□□□ -0.88
CAPN1-212ENST00000527887 RPS10P46783 165 aaKnown RBP9.58□□□□□ -0.88
CAPN1-212ENST00000527887 LELP1Q5T871 98 aa9.58□□□□□ -0.88
CAPN1-212ENST00000527887 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
CAPN1-212ENST00000527887 IGKV3D-20A0A0C4DH25 116 aa9.57□□□□□ -0.88
CAPN1-212ENST00000527887 IBA57-AS1B1ANH7 110 aa9.57□□□□□ -0.88
CAPN1-212ENST00000527887 ASIPP42127 132 aa9.57□□□□□ -0.88
CAPN1-212ENST00000527887 OR10J3Q5JRS4 329 aa9.57□□□□□ -0.88
CAPN1-212ENST00000527887 ATP6V0E2Q8NHE4 81 aa9.57□□□□□ -0.88
CAPN1-212ENST00000527887 GTSF1Q8WW33 167 aa9.57□□□□□ -0.88
CAPN1-212ENST00000527887 CNFNQ9BYD5 112 aa9.57□□□□□ -0.88
CAPN1-212ENST00000527887 IGLC6P0CF74 106 aa9.56□□□□□ -0.88
CAPN1-212ENST00000527887 CTRLP40313 264 aa9.56□□□□□ -0.88
CAPN1-212ENST00000527887 BORCS7Q96B45 105 aa9.56□□□□□ -0.88
CAPN1-212ENST00000527887 IGHV3-73A0A0B4J1V6 119 aa9.55□□□□□ -0.88
CAPN1-212ENST00000527887 A0A1B0GUT8 65 aa9.55□□□□□ -0.88
CAPN1-212ENST00000527887 A0A1B0GXF2 115 aa9.55□□□□□ -0.88
CAPN1-212ENST00000527887 PSCAO43653 123 aa9.55□□□□□ -0.88
CAPN1-212ENST00000527887 HLA-DQA1P01909 254 aa9.55□□□□□ -0.88
CAPN1-212ENST00000527887 RAB5BP61020 215 aa9.55□□□□□ -0.88
CAPN1-212ENST00000527887 RIGQ13278 110 aa9.55□□□□□ -0.88
CAPN1-212ENST00000527887 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
CAPN1-212ENST00000527887 SSBP4Q9BWG4 385 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-212ENST00000527887 RHODO00212 210 aa9.54□□□□□ -0.88
CAPN1-212ENST00000527887 OR5AL1P0C617 328 aa9.54□□□□□ -0.88
CAPN1-212ENST00000527887 HBBP68871 147 aa9.54□□□□□ -0.88
CAPN1-212ENST00000527887 LAGE3Q14657 143 aa9.54□□□□□ -0.88
CAPN1-212ENST00000527887 FER1L6-AS1Q8NA97 138 aa9.54□□□□□ -0.88
CAPN1-212ENST00000527887 GATD1Q8NB37 220 aa9.54□□□□□ -0.88
CAPN1-212ENST00000527887 NTN5Q8WTR8 489 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-212ENST00000527887 PHOX2AO14813 284 aa9.53□□□□□ -0.88
CAPN1-212ENST00000527887 SNAI2O43623 268 aa9.53□□□□□ -0.88
CAPN1-212ENST00000527887 PGLYRP4Q96LB8 373 aa9.53□□□□□ -0.88
CAPN1-212ENST00000527887 TM2D2Q9BX73 214 aa9.53□□□□□ -0.88
CAPN1-212ENST00000527887 TRAPPC1Q9Y5R8 145 aa9.53□□□□□ -0.88
CAPN1-212ENST00000527887 LRCOL1A6NCL2 159 aa9.52□□□□□ -0.89
CAPN1-212ENST00000527887 EPM2AB3EWF7 344 aa9.52□□□□□ -0.89
CAPN1-212ENST00000527887 TRGC2P03986 189 aa9.52□□□□□ -0.89
CAPN1-212ENST00000527887 GCSHP23434 173 aa9.52□□□□□ -0.89
CAPN1-212ENST00000527887 UFSP1Q6NVU6 142 aa9.52□□□□□ -0.89
CAPN1-212ENST00000527887 TMEM136Q6ZRR5 245 aa9.52□□□□□ -0.89
CAPN1-212ENST00000527887 ARMS2P0C7Q2 107 aa9.51□□□□□ -0.89
CAPN1-212ENST00000527887 LINC00694P0DN24 101 aa9.51□□□□□ -0.89
CAPN1-212ENST00000527887 GZMBP10144 247 aa9.51□□□□□ -0.89
CAPN1-212ENST00000527887 XGP55808 180 aa9.51□□□□□ -0.89
CAPN1-212ENST00000527887 CACNG7P62955 275 aa9.51□□□□□ -0.89
CAPN1-212ENST00000527887 DMRTA1Q5VZB9 504 aa9.51□□□□□ -0.89
CAPN1-212ENST00000527887 LYZL1Q6UWQ5 148 aa9.51□□□□□ -0.89
CAPN1-212ENST00000527887 Q6ZSN1 163 aa9.51□□□□□ -0.89
CAPN1-212ENST00000527887 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
CAPN1-212ENST00000527887 TRAV8-3A0A0A6YYJ7 113 aa9.5□□□□□ -0.89
CAPN1-212ENST00000527887 GAGE12JA6NER3 117 aa9.5□□□□□ -0.89
CAPN1-212ENST00000527887 H3BVH4 76 aa9.5□□□□□ -0.89
CAPN1-212ENST00000527887 KRTAP10-1P60331 282 aa9.5□□□□□ -0.89
CAPN1-212ENST00000527887 GAGE1Q13065 139 aa9.5□□□□□ -0.89
CAPN1-212ENST00000527887 GAGE4Q13068 117 aa9.5□□□□□ -0.89
CAPN1-212ENST00000527887 GAGE5Q13069 117 aa9.5□□□□□ -0.89
CAPN1-212ENST00000527887 GAGE13Q4V321 117 aa9.5□□□□□ -0.89
CAPN1-212ENST00000527887 MRPL54Q6P161 138 aaKnown RBP9.5□□□□□ -0.89
CAPN1-212ENST00000527887 TMSB15BA0A087X1C1 80 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 IGLV5-52A0A0A0MRZ9 124 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 IGHV3-30P01768 117 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 IGHV3-30-3P0DP02 117 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 IGHV3-30-5P0DP03 117 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 FABP9Q0Z7S8 132 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 Q8N814 137 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
CAPN1-212ENST00000527887 Q9HAA7 133 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 TMA7Q9Y2S6 64 aaKnown RBP9.49□□□□□ -0.89
CAPN1-212ENST00000527887 COX11Q9Y6N1 276 aa9.49□□□□□ -0.89
CAPN1-212ENST00000527887 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
CAPN1-212ENST00000527887 APCSP02743 223 aa9.48□□□□□ -0.89
CAPN1-212ENST00000527887 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.89
CAPN1-212ENST00000527887 ZFP82Q8N141 532 aa9.48□□□□□ -0.89
CAPN1-212ENST00000527887 FRZBQ92765 325 aa9.48□□□□□ -0.89
CAPN1-212ENST00000527887 TMEM70Q9BUB7 260 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms