RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 CDK12Q9NYV4 1490 aaPredicted RBP2.52□□□□□ -2.01
CTR9-203ENST00000526874 TRANK1O15050 2925 aa2.52□□□□□ -2.01
CTR9-203ENST00000526874 PATJQ8NI35 1801 aa2.52□□□□□ -2.01
CTR9-203ENST00000526874 MED13Q9UHV7 2174 aa2.52□□□□□ -2.01
CTR9-203ENST00000526874 TNS1Q9HBL0 1735 aaKnown RBP2.52□□□□□ -2.01
CTR9-203ENST00000526874 TRBV7-7A0A0K0K1E9 115 aa2.52□□□□□ -2.01
CTR9-203ENST00000526874 CDC42SE1Q9NRR8 79 aa2.52□□□□□ -2.01
CTR9-203ENST00000526874 MRPL36Q9P0J6 103 aaKnown RBP2.52□□□□□ -2.01
CTR9-203ENST00000526874 EFCAB5A4FU69 1503 aa2.52□□□□□ -2.01
CTR9-203ENST00000526874 CEP162Q5TB80 1403 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 MYO18AQ92614 2054 aaKnown RBP2.51□□□□□ -2.01
CTR9-203ENST00000526874 CASP8AP2Q9UKL3 1982 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 CHD8Q9HCK8 2581 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 IGKV3-7A0A075B6H7 116 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 TRBV10-1A0A0K0K1A3 114 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 NUPR2A6NF83 97 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 CYB5AP00167 134 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 GYPAP02724 150 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 TRAPPC2P0DI81 140 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 TRAPPC2BP0DI82 140 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 CCL8P80075 99 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 ALKAL2Q6UX46 152 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 ZNF720Q7Z2F6 126 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 SAMD9Q5K651 1589 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 SHANK2Q9UPX8 1470 aa2.51□□□□□ -2.01
CTR9-203ENST00000526874 COL1A2P08123 1366 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 TEX49A0A1B0GTD5 131 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 H3BRM9 83 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 H3BRN7 92 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 ATOX1O00244 68 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 SFT2D2O95562 160 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 RNASE3P12724 160 aaKnown RBP2.5□□□□□ -2.01
CTR9-203ENST00000526874 MYOZ3Q8TDC0 251 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 TVP23CQ96ET8 276 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 CYTL1Q9NRR1 136 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 ERVK-7P63135 1459 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 MAGI2Q86UL8 1455 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 DOCK10Q96BY6 2186 aa2.5□□□□□ -2.01
CTR9-203ENST00000526874 RRBP1Q9P2E9 1410 aaKnown RBP2.5□□□□□ -2.01
CTR9-203ENST00000526874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.49□□□□□ -2.01
CTR9-203ENST00000526874 A0A0J9YY99 117 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 TRBV6-4A0A1B0GX49 114 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 NAP1L6A6NFF2 107 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 CRYM-AS1A6NIL9 109 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 SIX6O95475 246 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 IGFL1Q6UW32 110 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 C4orf3Q8WVX3 66 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 S100A16Q96FQ6 103 aaKnown RBP2.49□□□□□ -2.01
CTR9-203ENST00000526874 CYP4F30PQ9H0H9 118 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 MED9Q9NWA0 146 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 TET3O43151 1660 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 PREX1Q8TCU6 1659 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 MAP3K4Q9Y6R4 1608 aa2.49□□□□□ -2.01
CTR9-203ENST00000526874 KIAA0100Q14667 2235 aaKnown RBP2.49□□□□□ -2.01
CTR9-203ENST00000526874 PTPRDP23468 1912 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 CR1P17927 2039 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 IGKV2-24A0A0C4DH68 120 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 IGLC7A0M8Q6 106 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 IGLV3-1P01715 115 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 UBE2D1P51668 147 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 KRTDAPP60985 99 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 C10orf55Q5SWW7 151 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 C6orf52Q5T4I8 152 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 SERP2Q8N6R1 65 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 DMAC1Q96GE9 116 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 TTTY12Q9BZ98 90 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 ZGRF1Q86YA3 2104 aa2.48□□□□□ -2.01
CTR9-203ENST00000526874 ARHGEF12Q9NZN5 1544 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 CTTNBP2Q8WZ74 1663 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 FREM1Q5H8C1 2179 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 BAHCC1Q9P281 2608 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 ABCA9Q8IUA7 1624 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 TRBV7-1A0A0A6YYK4 115 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 TRGV4A0A0C4DH28 118 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 PPYP01298 95 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 NDUFA11Q86Y39 141 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 AMELYQ99218 206 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 COL4A4P53420 1690 aaPredicted RBP2.47□□□□□ -2.01
CTR9-203ENST00000526874 SHROOM3Q8TF72 1996 aa2.47□□□□□ -2.01
CTR9-203ENST00000526874 TNRC18O15417 2968 aaPredicted RBP2.46□□□□□ -2.01
CTR9-203ENST00000526874 KIF14Q15058 1648 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 NHSL1Q5SYE7 1610 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 NCOA2Q15596 1464 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 MLH3Q9UHC1 1453 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 NWD2Q9ULI1 1742 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 BLMP54132 1417 aaPredicted RBP2.46□□□□□ -2.02
CTR9-203ENST00000526874 CLPSL1A2RUU4 121 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 APOC3P02656 99 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 ESPL1Q14674 2120 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 C10orf128Q5T292 105 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 LINC00304Q8N9R0 145 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 S100A13Q99584 98 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 REG4Q9BYZ8 158 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 CACFD1Q9UGQ2 172 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 SIP14410 1827 aa2.46□□□□□ -2.02
CTR9-203ENST00000526874 FN1P02751 2386 aaKnown RBP2.46□□□□□ -2.02
CTR9-203ENST00000526874 RTTNQ86VV8 2226 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms