RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
TRAPPC4-205ENST00000525079 EIF5A2Q9GZV4 153 aaKnown RBP8.57□□□□□ -1.04
TRAPPC4-205ENST00000525079 RPP21Q9H633 154 aaKnown RBP8.57□□□□□ -1.04
TRAPPC4-205ENST00000525079 KLK12Q9UKR0 248 aa8.57□□□□□ -1.04
TRAPPC4-205ENST00000525079 TMEM262E9PQX1 116 aa8.56□□□□□ -1.04
TRAPPC4-205ENST00000525079 TMEM250H0YL14 139 aa8.56□□□□□ -1.04
TRAPPC4-205ENST00000525079 NTF3P20783 257 aa8.56□□□□□ -1.04
TRAPPC4-205ENST00000525079 LAGE3Q14657 143 aa8.56□□□□□ -1.04
TRAPPC4-205ENST00000525079 MAPKAPK5-AS1Q8N8E1 139 aa8.56□□□□□ -1.04
TRAPPC4-205ENST00000525079 LRP1BQ9NZR2 4599 aa8.55□□□□□ -1.04
TRAPPC4-205ENST00000525079 A0A087WX48 190 aa8.55□□□□□ -1.04
TRAPPC4-205ENST00000525079 TRBV6-8A0A0A6YYG3 113 aa8.55□□□□□ -1.04
TRAPPC4-205ENST00000525079 TRAV8-3A0A0A6YYJ7 113 aa8.55□□□□□ -1.04
TRAPPC4-205ENST00000525079 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
TRAPPC4-205ENST00000525079 SUMO4Q6EEV6 95 aa8.55□□□□□ -1.04
TRAPPC4-205ENST00000525079 CDPF1Q6NVV7 123 aa8.55□□□□□ -1.04
TRAPPC4-205ENST00000525079 TM2D2Q9BX73 214 aa8.55□□□□□ -1.04
TRAPPC4-205ENST00000525079 RYR1P21817 5038 aa8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 M0QY20 66 aa8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 LECT2O14960 151 aa8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 GATCO43716 136 aaKnown RBP8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 WFDC2Q14508 124 aa8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 TWIST1Q15672 202 aa8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 KCNIP4Q6PIL6 250 aa8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 FAM210AQ96ND0 272 aa8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 CHCHD5Q9BSY4 110 aa8.54□□□□□ -1.04
TRAPPC4-205ENST00000525079 IGLV5-52A0A0A0MRZ9 124 aa8.53□□□□□ -1.04
TRAPPC4-205ENST00000525079 TRGC1P0CF51 173 aa8.53□□□□□ -1.04
TRAPPC4-205ENST00000525079 CTRLP40313 264 aa8.53□□□□□ -1.04
TRAPPC4-205ENST00000525079 Q8N814 137 aa8.53□□□□□ -1.04
TRAPPC4-205ENST00000525079 DEFB104AQ8WTQ1 72 aa8.53□□□□□ -1.04
TRAPPC4-205ENST00000525079 GTSF1Q8WW33 167 aa8.53□□□□□ -1.04
TRAPPC4-205ENST00000525079 UBE2WQ96B02 151 aa8.53□□□□□ -1.04
TRAPPC4-205ENST00000525079 DPH3P1Q9H4G8 78 aa8.53□□□□□ -1.04
TRAPPC4-205ENST00000525079 IGKV2D-24A0A075B6R9 120 aa8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 H7C1H1 209 aa8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 SRP19P09132 144 aaKnown RBP8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 GCSHP23434 173 aa8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 MPV17L2Q567V2 206 aa8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 WDR73Q6P4I2 378 aa8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 C15orf54Q8N8G6 183 aa8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 BAALCQ8WXS3 180 aa8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 SMIM7Q9BQ49 75 aa8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 DNAH5Q8TE73 4624 aa8.52□□□□□ -1.05
TRAPPC4-205ENST00000525079 HSPG2P98160 4391 aa8.51□□□□□ -1.05
TRAPPC4-205ENST00000525079 ZNF727A8MUV8 499 aa8.51□□□□□ -1.05
TRAPPC4-205ENST00000525079 FOXA3P55318 350 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-205ENST00000525079 GAGE6Q13070 117 aa8.51□□□□□ -1.05
TRAPPC4-205ENST00000525079 ELOBQ15370 118 aa8.51□□□□□ -1.05
TRAPPC4-205ENST00000525079 RASL11AQ6T310 242 aa8.51□□□□□ -1.05
TRAPPC4-205ENST00000525079 Q8N976 141 aa8.51□□□□□ -1.05
TRAPPC4-205ENST00000525079 PGLYRP4Q96LB8 373 aa8.51□□□□□ -1.05
TRAPPC4-205ENST00000525079 CHCHD7Q9BUK0 85 aa8.51□□□□□ -1.05
TRAPPC4-205ENST00000525079 A8MWL6 223 aa8.5□□□□□ -1.05
TRAPPC4-205ENST00000525079 ANGP03950 147 aaKnown RBP8.5□□□□□ -1.05
TRAPPC4-205ENST00000525079 TMEM97Q5BJF2 176 aa8.5□□□□□ -1.05
TRAPPC4-205ENST00000525079 ATRAIDQ6UW56 229 aa8.5□□□□□ -1.05
TRAPPC4-205ENST00000525079 ENHOQ6UWT2 76 aa8.5□□□□□ -1.05
TRAPPC4-205ENST00000525079 FAM231DQ6ZW35 169 aa8.5□□□□□ -1.05
TRAPPC4-205ENST00000525079 RMI2Q96E14 147 aa8.5□□□□□ -1.05
TRAPPC4-205ENST00000525079 CNFNQ9BYD5 112 aa8.5□□□□□ -1.05
TRAPPC4-205ENST00000525079 NIT2Q9NQR4 276 aa8.5□□□□□ -1.05
TRAPPC4-205ENST00000525079 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC4-205ENST00000525079 TRBV25-1A0A075B6N4 114 aa8.49□□□□□ -1.05
TRAPPC4-205ENST00000525079 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
TRAPPC4-205ENST00000525079 XGP55808 180 aa8.49□□□□□ -1.05
TRAPPC4-205ENST00000525079 LINC01551Q86U37 167 aa8.49□□□□□ -1.05
TRAPPC4-205ENST00000525079 Q8N1X5 172 aa8.49□□□□□ -1.05
TRAPPC4-205ENST00000525079 NTN5Q8WTR8 489 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC4-205ENST00000525079 APOBP04114 4563 aaKnown RBP8.49□□□□□ -1.05
TRAPPC4-205ENST00000525079 IGHV1-24A0A0C4DH33 117 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 C9JQL5 133 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 CRPP02741 224 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 RBX1P62877 108 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 HAMPP81172 84 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 SRSF3P84103 164 aaKnown RBP8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 CLPSL2Q6UWE3 100 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 TEX261Q6UWH6 196 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 GATD1Q8NB37 220 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 COX11Q9Y6N1 276 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 PCLOQ9Y6V0 5065 aa8.48□□□□□ -1.05
TRAPPC4-205ENST00000525079 NDUFS6O75380 124 aaKnown RBP8.47□□□□□ -1.05
TRAPPC4-205ENST00000525079 Q0VG73 95 aa8.47□□□□□ -1.05
TRAPPC4-205ENST00000525079 IQCJQ1A5X6 159 aa8.47□□□□□ -1.05
TRAPPC4-205ENST00000525079 SMIM15Q7Z3B0 74 aa8.47□□□□□ -1.05
TRAPPC4-205ENST00000525079 PKIAP61925 76 aa8.46□□□□□ -1.06
TRAPPC4-205ENST00000525079 TMEM241Q24JQ0 296 aa8.46□□□□□ -1.06
TRAPPC4-205ENST00000525079 CT83Q5H943 113 aa8.46□□□□□ -1.06
TRAPPC4-205ENST00000525079 LINC00269Q8N2A0 174 aa8.46□□□□□ -1.06
TRAPPC4-205ENST00000525079 RPL39LQ96EH5 51 aaKnown RBP8.46□□□□□ -1.06
TRAPPC4-205ENST00000525079 C1orf43Q9BWL3 253 aa8.46□□□□□ -1.06
TRAPPC4-205ENST00000525079 OSTCQ9NRP0 149 aa8.46□□□□□ -1.06
TRAPPC4-205ENST00000525079 HIGD1CA8MV81 97 aa8.45□□□□□ -1.06
TRAPPC4-205ENST00000525079 LINC01620Q4KN68 170 aa8.45□□□□□ -1.06
TRAPPC4-205ENST00000525079 TSKUQ8WUA8 353 aa8.45□□□□□ -1.06
TRAPPC4-205ENST00000525079 BORCS7Q96B45 105 aa8.45□□□□□ -1.06
TRAPPC4-205ENST00000525079 TMEM243Q9BU79 118 aa8.45□□□□□ -1.06
TRAPPC4-205ENST00000525079 SMR3BP02814 79 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms