RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 FAM19A3Q7Z5A8 133 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 ATP6V0E2Q8NHE4 81 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 C16orf95Q9H693 158 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 JPT2Q9H910 190 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 MUC4Q99102 2169 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 RS1O15537 224 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 ZNF56Q15929 161 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 CD300EQ496F6 205 aaPredicted RBP3.99□□□□□ -1.77
CLINT1-208ENST00000524306 C11orf72Q8NBR9 251 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 DUX5Q96PT3 197 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 SPATA25Q9BR10 227 aa3.99□□□□□ -1.77
CLINT1-208ENST00000524306 IGKV3-7A0A075B6H7 116 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 IGLV4-3A0A075B6K6 122 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 IGHV3-53P01767 116 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 IGHV3-30P01768 117 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 RBMY1A1P0DJD3 496 aaKnown RBP3.98□□□□□ -1.77
CLINT1-208ENST00000524306 RBMY1CP0DJD4 496 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 IGHV3-30-5P0DP03 117 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 UBE2D3P61077 147 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 UBE2D2P62837 147 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 RBMY1FQ15415 496 aaKnown RBP3.98□□□□□ -1.77
CLINT1-208ENST00000524306 ZNRF2Q8NHG8 242 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 MAP6D1Q9H9H5 199 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 CHD8Q9HCK8 2581 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 TRBV20-1A0A075B6N2 111 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 TRAV12-2A0A075B6T6 113 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 RBMY1BA6NDE4 496 aaKnown RBP3.98□□□□□ -1.77
CLINT1-208ENST00000524306 RBMY1EA6NEQ0 496 aaKnown RBP3.98□□□□□ -1.77
CLINT1-208ENST00000524306 J3QQQ9 107 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 INSP01308 110 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 RBMY1DP0C7P1 496 aaKnown RBP3.98□□□□□ -1.77
CLINT1-208ENST00000524306 NRGNQ92686 78 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 RAB37Q96AX2 223 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 RAX2Q96IS3 184 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 PRO0461Q9UI25 63 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 TPRP12270 2363 aaKnown RBP3.98□□□□□ -1.77
CLINT1-208ENST00000524306 A0A0B4J2C4 111 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 TINCRA0A1B0GVN0 87 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 SPRY2O43597 315 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 TIMM17BO60830 172 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 ZNF22P17026 224 aaPredicted RBP3.98□□□□□ -1.77
CLINT1-208ENST00000524306 DEFB131AP59861 70 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 RPL39P62891 51 aaKnown RBP3.98□□□□□ -1.77
CLINT1-208ENST00000524306 KRTAP1-1Q07627 177 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 SBSPONQ8IVN8 264 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 VCX2Q9H322 139 aa3.98□□□□□ -1.77
CLINT1-208ENST00000524306 CSDC2Q9Y534 153 aaKnown RBP3.98□□□□□ -1.77
CLINT1-208ENST00000524306 SPTA1P02549 2419 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 IGLV5-45A0A087WSX0 123 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 TRBV10-1A0A0K0K1A3 114 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 NDUFA7O95182 113 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 SLURP1P55000 103 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 TIRAPP58753 221 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 RPL24P83731 157 aaKnown RBP3.97□□□□□ -1.77
CLINT1-208ENST00000524306 CFAP126Q5VTH2 177 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 TMEM61Q8N0U2 210 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 ATRXP46100 2492 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 A0A0J9YXY3 114 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 K7ERJ3 54 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 LGALS3P17931 250 aaKnown RBP3.97□□□□□ -1.77
CLINT1-208ENST00000524306 TCTAP57738 103 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 SMAGPQ0VAQ4 97 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 NDUFA11Q86Y39 141 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 CHCHD7Q9BUK0 85 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 TNFRSF18Q9Y5U5 241 aa3.97□□□□□ -1.77
CLINT1-208ENST00000524306 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.96□□□□□ -1.77
CLINT1-208ENST00000524306 WNK2Q9Y3S1 2297 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.96□□□□□ -1.78
CLINT1-208ENST00000524306 TEX48A0A1B0GUV7 120 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 GAGE12HA6NDE8 117 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 KNCNA6PVL3 124 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 H3BMG7 143 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 AZU1P20160 251 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 FAM74A4Q5TZK3 123 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 Q6ZSV7 163 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 DYNLRB2Q8TF09 96 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 Q96MF0 132 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 DUX3Q96PT4 197 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 SPANXCQ9NY87 97 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 LRBAP50851 2863 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 LCE2BO14633 110 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 RNASE1P07998 156 aaKnown RBP3.96□□□□□ -1.78
CLINT1-208ENST00000524306 TSPEAR-AS2P59090 65 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 SRSF9Q13242 221 aaKnown RBP eCLIP3.96□□□□□ -1.78
CLINT1-208ENST00000524306 GAGE13Q4V321 117 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 TMEM170BQ5T4T1 132 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 C10orf126Q8N4M7 172 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 UBE2D4Q9Y2X8 147 aa3.96□□□□□ -1.78
CLINT1-208ENST00000524306 IGHV1-58A0A0C4DH39 117 aa3.95□□□□□ -1.78
CLINT1-208ENST00000524306 H7C423 109 aa3.95□□□□□ -1.78
CLINT1-208ENST00000524306 TSPAN13O95857 204 aa3.95□□□□□ -1.78
CLINT1-208ENST00000524306 KRTAP10-9P60411 292 aa3.95□□□□□ -1.78
CLINT1-208ENST00000524306 DAZ2Q13117 558 aaKnown RBP3.95□□□□□ -1.78
CLINT1-208ENST00000524306 PGPEP1Q9NXJ5 209 aa3.95□□□□□ -1.78
CLINT1-208ENST00000524306 USP9XQ93008 2570 aaPredicted RBP3.95□□□□□ -1.78
CLINT1-208ENST00000524306 ACACBO00763 2458 aa3.95□□□□□ -1.78
CLINT1-208ENST00000524306 DNAJC9-AS1A6NH13 148 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms