RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 KRTAP27-1Q3LI81 207 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 CXCL17Q6UXB2 119 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 CYYR1Q96J86 154 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 CCL28Q9NRJ3 127 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 LRP4O75096 1905 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 CACNA1GO43497 2377 aa4.65□□□□□ -1.67
SDC2-208ENST00000523877 CHD9Q3L8U1 2897 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 ZNF318Q5VUA4 2279 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 A0A096LNJ9 63 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 IGHV7-81A0A0B4J1V7 117 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 IGKV3D-20A0A0C4DH25 116 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 IGKV3D-7A0A0C4DH55 119 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 CPSF4LA6NMK7 179 aaKnown RBP4.64□□□□□ -1.67
SDC2-208ENST00000523877 TMEM14DPA8MWL7 114 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 IGHV3-30P01768 117 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 IGHV3-30-5P0DP03 117 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 TTTY13Q9BZ97 58 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 ARHGEF17Q96PE2 2063 aaPredicted RBP4.64□□□□□ -1.67
SDC2-208ENST00000523877 CHD6Q8TD26 2715 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 GON4LQ3T8J9 2241 aa4.64□□□□□ -1.67
SDC2-208ENST00000523877 UNC79Q9P2D8 2635 aa4.63□□□□□ -1.67
SDC2-208ENST00000523877 TDRD6O60522 2096 aaKnown RBP4.63□□□□□ -1.67
SDC2-208ENST00000523877 CISD3P0C7P0 127 aa4.63□□□□□ -1.67
SDC2-208ENST00000523877 LINC00271P0C7V0 271 aa4.63□□□□□ -1.67
SDC2-208ENST00000523877 COX7A1P24310 79 aa4.63□□□□□ -1.67
SDC2-208ENST00000523877 Q5VV11 94 aa4.63□□□□□ -1.67
SDC2-208ENST00000523877 C9orf106Q8NAJ2 232 aa4.63□□□□□ -1.67
SDC2-208ENST00000523877 RPP21Q9H633 154 aaKnown RBP4.63□□□□□ -1.67
SDC2-208ENST00000523877 ICOSQ9Y6W8 199 aa4.63□□□□□ -1.67
SDC2-208ENST00000523877 U3KQK5 164 aa4.63□□□□□ -1.67
SDC2-208ENST00000523877 PCNX3Q9H6A9 2034 aa4.63□□□□□ -1.67
SDC2-208ENST00000523877 DNAH14Q0VDD8 3507 aa4.62□□□□□ -1.67
SDC2-208ENST00000523877 MYO15AQ9UKN7 3530 aa4.62□□□□□ -1.67
SDC2-208ENST00000523877 IGLV5-45A0A087WSX0 123 aa4.62□□□□□ -1.67
SDC2-208ENST00000523877 C11orf86A6NJI1 115 aa4.62□□□□□ -1.67
SDC2-208ENST00000523877 ARL14EPLP0DKL9 152 aa4.62□□□□□ -1.67
SDC2-208ENST00000523877 FLVCR1-AS1Q8TAF5 88 aa4.62□□□□□ -1.67
SDC2-208ENST00000523877 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
SDC2-208ENST00000523877 TMEM14BQ9NUH8 114 aa4.62□□□□□ -1.67
SDC2-208ENST00000523877 SPTBN4Q9H254 2564 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 CHD7Q9P2D1 2997 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 COL11A1P12107 1806 aaPredicted RBP4.61□□□□□ -1.67
SDC2-208ENST00000523877 TRAV23DV6A0A075B6W5 121 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 IGHV3OR16-10A0A075B7F0 116 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 A0A087WVE0 104 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 F8VRH5 84 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 LY6G6DO95868 133 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 IGKV1-39P01597 117 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 IGKV1D-39P04432 117 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 CHTF8P0CG12 524 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 TSPEAR-AS2P59090 65 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 C2orf83Q53S99 150 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 KLF14Q8TD94 323 aaPredicted RBP4.61□□□□□ -1.67
SDC2-208ENST00000523877 FAM104AQ969W3 186 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 B9D2Q9BPU9 175 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 LINC00574Q9H8X3 128 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 ZNF355PQ9NSJ1 428 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 SNURFQ9Y675 71 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 DNAH12Q6ZR08 3092 aa4.61□□□□□ -1.67
SDC2-208ENST00000523877 TRBV6-8A0A0A6YYG3 113 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 IGKV1-6A0A0C4DH72 117 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 A0A0J9YY99 117 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 D6R8Y8 96 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 K7EQG2 157 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 SOCS3O14543 225 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 PROP1O75360 226 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 IGHV4-38-2P0DP08 117 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 HMGA1P17096 107 aaKnown RBP4.6□□□□□ -1.67
SDC2-208ENST00000523877 CCL14Q16627 93 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 C17orf58Q2M2W7 97 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 Q6ZTC4 211 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 MUSTN1Q8IVN3 82 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 Q8N814 137 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 LHFPL6Q9Y693 200 aa4.6□□□□□ -1.67
SDC2-208ENST00000523877 IGHV3-74A0A0B4J1X5 117 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 TRBV7-4A0A0J9YYF1 115 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 A0A1B0GUT8 65 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 A6NED7 52 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 PPP1R17O96001 155 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 ARMS2P0C7Q2 107 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 PRB4P10163 310 aaPredicted RBP4.59□□□□□ -1.67
SDC2-208ENST00000523877 IL9P15248 144 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 RPL28P46779 137 aaKnown RBP4.59□□□□□ -1.67
SDC2-208ENST00000523877 FHL1Q13642 323 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 C10orf128Q5T292 105 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 LYPD6Q86Y78 171 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 TMEM254Q8TBM7 123 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 IMMP1LQ96LU5 166 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 MSRB1Q9NZV6 116 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 DPM3Q9P2X0 92 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 MYO16Q9Y6X6 1858 aa4.59□□□□□ -1.67
SDC2-208ENST00000523877 ASH1LQ9NR48 2969 aaKnown RBP4.59□□□□□ -1.68
SDC2-208ENST00000523877 SETXQ7Z333 2677 aaKnown RBP4.59□□□□□ -1.68
SDC2-208ENST00000523877 NACAE9PAV3 2078 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 TCF20Q9UGU0 1960 aaKnown RBP4.58□□□□□ -1.68
SDC2-208ENST00000523877 TRANK1O15050 2925 aa4.58□□□□□ -1.68
SDC2-208ENST00000523877 ANKRD11Q6UB99 2663 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms