RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 IGSF10Q6WRI0 2623 aa5.59□□□□□ -1.52
HDAC9-227ENST00000523867 IGKV2-40A0A087WW87 121 aaPredicted RBP5.59□□□□□ -1.52
HDAC9-227ENST00000523867 A0A0B4J2C4 111 aa5.59□□□□□ -1.52
HDAC9-227ENST00000523867 IGKV2D-40P01614 121 aaPredicted RBP5.59□□□□□ -1.52
HDAC9-227ENST00000523867 EEF1AKMT3Q96AZ1 226 aa5.59□□□□□ -1.52
HDAC9-227ENST00000523867 BSNQ9UPA5 3926 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 ZGRF1Q86YA3 2104 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 A0A0J9YY99 117 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 CRIP2P52943 208 aaPredicted RBP5.58□□□□□ -1.52
HDAC9-227ENST00000523867 LINC00643Q86TS7 51 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 ASH1LQ9NR48 2969 aaKnown RBP5.58□□□□□ -1.52
HDAC9-227ENST00000523867 DPM3Q9P2X0 92 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 NBASA2RRP1 2371 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 POLEQ07864 2286 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 GCN1Q92616 2671 aaKnown RBP5.58□□□□□ -1.52
HDAC9-227ENST00000523867 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.58□□□□□ -1.52
HDAC9-227ENST00000523867 IGHV3-33P01772 117 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 EGR2P11161 476 aaPredicted RBP5.58□□□□□ -1.52
HDAC9-227ENST00000523867 Q5XG85 94 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 SLC25A29Q8N8R3 303 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 PSMG3-AS1Q96PY0 264 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 PRR25Q96S07 402 aa5.58□□□□□ -1.52
HDAC9-227ENST00000523867 TLN1Q9Y490 2541 aaKnown RBP5.57□□□□□ -1.52
HDAC9-227ENST00000523867 IGLV11-55A0A075B6I3 123 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 TRBV30A0A0K0K1B3 111 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 ATOX1O00244 68 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 PAPPA-AS1Q5QFB9 102 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 NPBQ8NG41 125 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 Q8TAT8 98 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 ZNF256Q9Y2P7 627 aaPredicted RBP5.57□□□□□ -1.52
HDAC9-227ENST00000523867 IGHV3-23P01764 117 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 APOC4P55056 127 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 PMAIP1Q13794 54 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 C5orf38Q86SI9 138 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 NEXN-AS1Q8NBZ9 246 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 PLEKHB2Q96CS7 222 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 LINC00527Q9UJ94 153 aa5.57□□□□□ -1.52
HDAC9-227ENST00000523867 ZFYVE26Q68DK2 2539 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.56□□□□□ -1.52
HDAC9-227ENST00000523867 ZNF80P51504 273 aaPredicted RBP5.56□□□□□ -1.52
HDAC9-227ENST00000523867 HERVK_113P61574 105 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 IGFL4Q6B9Z1 124 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 C2orf82Q6UX34 121 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 SDIM1Q6ZPB5 146 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 TMEM263Q8WUH6 116 aaKnown RBP5.56□□□□□ -1.52
HDAC9-227ENST00000523867 JPT2Q9H910 190 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 KLK5Q9Y337 293 aaPredicted RBP5.56□□□□□ -1.52
HDAC9-227ENST00000523867 LRBAP50851 2863 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 FASNP49327 2511 aaKnown RBP5.56□□□□□ -1.52
HDAC9-227ENST00000523867 F8W735 103 aaPredicted RBP5.56□□□□□ -1.52
HDAC9-227ENST00000523867 GYPEP15421 78 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 HIST1H4AP62805 103 aaKnown RBP5.56□□□□□ -1.52
HDAC9-227ENST00000523867 LY6G5BQ8NDX9 201 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 METTL26Q96S19 204 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 MDFIQ99750 246 aa5.56□□□□□ -1.52
HDAC9-227ENST00000523867 LINC00482Q8N8I6 264 aa5.55□□□□□ -1.52
HDAC9-227ENST00000523867 LINC01560Q8TB33 94 aa5.55□□□□□ -1.52
HDAC9-227ENST00000523867 MSRB1Q9NZV6 116 aa5.55□□□□□ -1.52
HDAC9-227ENST00000523867 ORMDL2Q53FV1 153 aa5.55□□□□□ -1.52
HDAC9-227ENST00000523867 CEMP1Q6PRD7 247 aaPredicted RBP5.55□□□□□ -1.52
HDAC9-227ENST00000523867 TOMM6Q96B49 74 aa5.55□□□□□ -1.52
HDAC9-227ENST00000523867 SMAD5-AS1Q9Y6J3 95 aa5.55□□□□□ -1.52
HDAC9-227ENST00000523867 A0A0U1RQV1 116 aa5.54□□□□□ -1.52
HDAC9-227ENST00000523867 GAS8-AS1O95177 125 aa5.54□□□□□ -1.52
HDAC9-227ENST00000523867 CTSGP08311 255 aa5.54□□□□□ -1.52
HDAC9-227ENST00000523867 NDPQ00604 133 aa5.54□□□□□ -1.52
HDAC9-227ENST00000523867 SPATA3Q8NHX4 192 aa5.54□□□□□ -1.52
HDAC9-227ENST00000523867 IGHV3OR16-8A0A075B7F1 116 aa5.54□□□□□ -1.52
HDAC9-227ENST00000523867 IGHV3-35A0A0C4DH35 117 aa5.54□□□□□ -1.52
HDAC9-227ENST00000523867 H7C423 109 aa5.54□□□□□ -1.52
HDAC9-227ENST00000523867 LY6HO94772 140 aa5.54□□□□□ -1.52
HDAC9-227ENST00000523867 MRPL55Q7Z7F7 128 aaKnown RBP5.54□□□□□ -1.52
HDAC9-227ENST00000523867 NDUFC2-KCTD14E9PQ53 114 aa5.53□□□□□ -1.52
HDAC9-227ENST00000523867 ERCC8Q13216 396 aa5.53□□□□□ -1.52
HDAC9-227ENST00000523867 ZNF575Q86XF7 245 aa5.53□□□□□ -1.52
HDAC9-227ENST00000523867 SCGB3A1Q96QR1 104 aa5.53□□□□□ -1.52
HDAC9-227ENST00000523867 ODF3BA8MYP8 253 aa5.53□□□□□ -1.52
HDAC9-227ENST00000523867 M0R1W7 72 aa5.53□□□□□ -1.52
HDAC9-227ENST00000523867 DYNAPQ8N1N2 210 aa5.53□□□□□ -1.52
HDAC9-227ENST00000523867 NRACQ8N912 160 aa5.53□□□□□ -1.52
HDAC9-227ENST00000523867 PYGO1Q9Y3Y4 419 aa5.53□□□□□ -1.52
HDAC9-227ENST00000523867 TRAV13-1A0A0B4J241 112 aa5.52□□□□□ -1.53
HDAC9-227ENST00000523867 PLA2G2DQ9UNK4 145 aa5.52□□□□□ -1.53
HDAC9-227ENST00000523867 ABCA4P78363 2273 aa5.52□□□□□ -1.53
HDAC9-227ENST00000523867 hADV29S1A0JD25 119 aa5.52□□□□□ -1.53
HDAC9-227ENST00000523867 PRAC2D3DTV9 90 aa5.52□□□□□ -1.53
HDAC9-227ENST00000523867 COX6CP09669 75 aa5.52□□□□□ -1.53
HDAC9-227ENST00000523867 C9orf85Q96MD7 179 aa5.52□□□□□ -1.53
HDAC9-227ENST00000523867 AGPAT4-IT1Q9H0P7 198 aa5.52□□□□□ -1.53
HDAC9-227ENST00000523867 IGHV4-39P01824 125 aa5.51□□□□□ -1.53
HDAC9-227ENST00000523867 VMO1Q7Z5L0 202 aa5.51□□□□□ -1.53
HDAC9-227ENST00000523867 RNF182Q8N6D2 247 aa5.51□□□□□ -1.53
HDAC9-227ENST00000523867 ARHGAP32A7KAX9 2087 aa5.51□□□□□ -1.53
HDAC9-227ENST00000523867 DCHS2Q6V1P9 2916 aa5.51□□□□□ -1.53
HDAC9-227ENST00000523867 SVEP1Q4LDE5 3571 aa5.51□□□□□ -1.53
HDAC9-227ENST00000523867 IGHV7-81A0A0B4J1V7 117 aa5.51□□□□□ -1.53
HDAC9-227ENST00000523867 ZNF22P17026 224 aaPredicted RBP5.51□□□□□ -1.53
HDAC9-227ENST00000523867 C15orf32Q32M92 178 aa5.51□□□□□ -1.53
HDAC9-227ENST00000523867 Q8N6K4 173 aa5.51□□□□□ -1.53
HDAC9-227ENST00000523867 HELZ2Q9BYK8 2649 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms