RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 TRBV6-8A0A0A6YYG3 113 aa10.94□□□□□ -0.66
LSM1-205ENST00000523511 MGPP08493 103 aa10.94□□□□□ -0.66
LSM1-205ENST00000523511 CEBPGP53567 150 aa10.94□□□□□ -0.66
LSM1-205ENST00000523511 LYZL1Q6UWQ5 148 aa10.94□□□□□ -0.66
LSM1-205ENST00000523511 NIT1Q86X76 327 aa10.94□□□□□ -0.66
LSM1-205ENST00000523511 NEXN-AS1Q8NBZ9 246 aa10.94□□□□□ -0.66
LSM1-205ENST00000523511 NTF3P20783 257 aa10.93□□□□□ -0.66
LSM1-205ENST00000523511 NKX2-5P52952 324 aaPredicted RBP10.93□□□□□ -0.66
LSM1-205ENST00000523511 TWIST1Q15672 202 aa10.93□□□□□ -0.66
LSM1-205ENST00000523511 NTN5Q8WTR8 489 aaPredicted RBP10.93□□□□□ -0.66
LSM1-205ENST00000523511 KIF25-AS1Q9Y6Z4 181 aa10.93□□□□□ -0.66
LSM1-205ENST00000523511 GATCO43716 136 aaKnown RBP10.92□□□□□ -0.66
LSM1-205ENST00000523511 Q0VG73 95 aa10.92□□□□□ -0.66
LSM1-205ENST00000523511 RNASE7Q9H1E1 156 aaKnown RBP10.92□□□□□ -0.66
LSM1-205ENST00000523511 DPH3P1Q9H4G8 78 aa10.92□□□□□ -0.66
LSM1-205ENST00000523511 A8MWL6 223 aa10.91□□□□□ -0.66
LSM1-205ENST00000523511 BORCS7Q96B45 105 aa10.91□□□□□ -0.66
LSM1-205ENST00000523511 FAM210AQ96ND0 272 aa10.91□□□□□ -0.66
LSM1-205ENST00000523511 CHCHD5Q9BSY4 110 aa10.91□□□□□ -0.66
LSM1-205ENST00000523511 A0A1B0GVG6 124 aa10.9□□□□□ -0.66
LSM1-205ENST00000523511 FAM231DQ6ZW35 169 aa10.9□□□□□ -0.66
LSM1-205ENST00000523511 SMIM7Q9BQ49 75 aa10.9□□□□□ -0.66
LSM1-205ENST00000523511 KLK12Q9UKR0 248 aa10.9□□□□□ -0.66
LSM1-205ENST00000523511 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.67
LSM1-205ENST00000523511 DNAH11Q96DT5 4516 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 TRBV25-1A0A075B6N4 114 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 ZNF727A8MUV8 499 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 K7EN84 100 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 M0QY20 66 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 GCSHP23434 173 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 CTRLP40313 264 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 RASL11AQ6T310 242 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 FRZBQ92765 325 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 PKHD1P08F94 4074 aa10.89□□□□□ -0.67
LSM1-205ENST00000523511 HERC2O95714 4834 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 IGLV5-52A0A0A0MRZ9 124 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 LRCOL1A6NCL2 159 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 CRPP02741 224 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 SUMO4Q6EEV6 95 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 TEX261Q6UWH6 196 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 Q8N814 137 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 UBE2WQ96B02 151 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 CNFNQ9BYD5 112 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 NIT2Q9NQR4 276 aa10.88□□□□□ -0.67
LSM1-205ENST00000523511 IGKV2D-24A0A075B6R9 120 aa10.87□□□□□ -0.67
LSM1-205ENST00000523511 IGHV1-24A0A0C4DH33 117 aa10.87□□□□□ -0.67
LSM1-205ENST00000523511 FAM74A3Q4VXF1 159 aa10.87□□□□□ -0.67
LSM1-205ENST00000523511 CT83Q5H943 113 aa10.87□□□□□ -0.67
LSM1-205ENST00000523511 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
LSM1-205ENST00000523511 ANGP03950 147 aaKnown RBP10.86□□□□□ -0.67
LSM1-205ENST00000523511 PEA15Q15121 130 aa10.86□□□□□ -0.67
LSM1-205ENST00000523511 C15orf54Q8N8G6 183 aa10.86□□□□□ -0.67
LSM1-205ENST00000523511 Q8N976 141 aa10.86□□□□□ -0.67
LSM1-205ENST00000523511 SMDT1Q9H4I9 107 aa10.86□□□□□ -0.67
LSM1-205ENST00000523511 FOXA3P55318 350 aaPredicted RBP10.85□□□□□ -0.67
LSM1-205ENST00000523511 Q8N3U1 123 aa10.85□□□□□ -0.67
LSM1-205ENST00000523511 C1orf43Q9BWL3 253 aa10.85□□□□□ -0.67
LSM1-205ENST00000523511 DYNC1H1Q14204 4646 aaKnown RBP10.85□□□□□ -0.67
LSM1-205ENST00000523511 FAM231BA6NCW3 169 aa10.84□□□□□ -0.67
LSM1-205ENST00000523511 SRP19P09132 144 aaKnown RBP10.84□□□□□ -0.67
LSM1-205ENST00000523511 IQCJQ1A5X6 159 aa10.84□□□□□ -0.67
LSM1-205ENST00000523511 TMEM241Q24JQ0 296 aa10.84□□□□□ -0.67
LSM1-205ENST00000523511 LINC01551Q86U37 167 aa10.84□□□□□ -0.67
LSM1-205ENST00000523511 GFRA4Q9GZZ7 299 aa10.84□□□□□ -0.67
LSM1-205ENST00000523511 PGLYRP4Q96LB8 373 aa10.83□□□□□ -0.68
LSM1-205ENST00000523511 OSTCQ9NRP0 149 aa10.83□□□□□ -0.68
LSM1-205ENST00000523511 UBE2L6O14933 153 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 COTL1Q14019 142 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 MIAQ16674 131 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 C14orf177Q52M58 125 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 MPV17L2Q567V2 206 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 ATRAIDQ6UW56 229 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 NTM-AS1Q6ZSK4 140 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 Q8N1X5 172 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 TSKUQ8WUA8 353 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 GTSF1Q8WW33 167 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 TMEM243Q9BU79 118 aa10.82□□□□□ -0.68
LSM1-205ENST00000523511 FUSP35637 526 aaKnown RBP eCLIP10.81□□□□□ -0.68
LSM1-205ENST00000523511 GAGE6Q13070 117 aa10.81□□□□□ -0.68
LSM1-205ENST00000523511 BAALCQ8WXS3 180 aa10.81□□□□□ -0.68
LSM1-205ENST00000523511 A0A1B0GUT8 65 aa10.8□□□□□ -0.68
LSM1-205ENST00000523511 RBX1P62877 108 aa10.8□□□□□ -0.68
LSM1-205ENST00000523511 AMTP48728 403 aa10.79□□□□□ -0.68
LSM1-205ENST00000523511 RIGQ13278 110 aa10.79□□□□□ -0.68
LSM1-205ENST00000523511 ENHOQ6UWT2 76 aa10.79□□□□□ -0.68
LSM1-205ENST00000523511 GATD1Q8NB37 220 aa10.79□□□□□ -0.68
LSM1-205ENST00000523511 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
LSM1-205ENST00000523511 NAT8Q9UHE5 227 aa10.79□□□□□ -0.68
LSM1-205ENST00000523511 A0A1B0GUV1 79 aa10.78□□□□□ -0.68
LSM1-205ENST00000523511 HIGD1CA8MV81 97 aa10.78□□□□□ -0.68
LSM1-205ENST00000523511 LECT2O14960 151 aa10.78□□□□□ -0.68
LSM1-205ENST00000523511 NCR2O95944 276 aa10.78□□□□□ -0.68
LSM1-205ENST00000523511 KRTAP10-1P60331 282 aa10.78□□□□□ -0.68
LSM1-205ENST00000523511 RAB14P61106 215 aa10.78□□□□□ -0.68
LSM1-205ENST00000523511 LINC00269Q8N2A0 174 aa10.78□□□□□ -0.68
LSM1-205ENST00000523511 TRAV8-4A0A0B4J246 113 aa10.77□□□□□ -0.69
LSM1-205ENST00000523511 TMEM191AQ9H0A3 160 aa10.77□□□□□ -0.69
LSM1-205ENST00000523511 PRR34Q9NV39 138 aa10.77□□□□□ -0.69
LSM1-205ENST00000523511 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.76□□□□□ -0.69
LSM1-205ENST00000523511 PPP1R17O96001 155 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms