RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 OR2D3Q8NGH3 330 aa13.62□□□□□ -0.23
SDCBP-209ENST00000522243 DAZAP1Q96EP5 407 aaKnown RBP13.62□□□□□ -0.23
SDCBP-209ENST00000522243 MPV17L2Q567V2 206 aa13.61□□□□□ -0.23
SDCBP-209ENST00000522243 C15orf54Q8N8G6 183 aa13.61□□□□□ -0.23
SDCBP-209ENST00000522243 AP1S3Q96PC3 154 aa13.61□□□□□ -0.23
SDCBP-209ENST00000522243 FAT1Q14517 4588 aa13.6□□□□□ -0.23
SDCBP-209ENST00000522243 C1QBP02746 253 aa13.6□□□□□ -0.23
SDCBP-209ENST00000522243 MGPP08493 103 aa13.6□□□□□ -0.23
SDCBP-209ENST00000522243 GNG4P50150 75 aa13.6□□□□□ -0.23
SDCBP-209ENST00000522243 Q8N976 141 aa13.6□□□□□ -0.23
SDCBP-209ENST00000522243 FER1L6-AS1Q8NA97 138 aa13.6□□□□□ -0.23
SDCBP-209ENST00000522243 CHCHD5Q9BSY4 110 aa13.6□□□□□ -0.23
SDCBP-209ENST00000522243 C19orf71A6NCJ1 209 aa13.59□□□□□ -0.23
SDCBP-209ENST00000522243 IGLC6P0CF74 106 aa13.59□□□□□ -0.23
SDCBP-209ENST00000522243 MEF2BQ02080 365 aaPredicted RBP13.59□□□□□ -0.23
SDCBP-209ENST00000522243 Q0VG73 95 aa13.59□□□□□ -0.23
SDCBP-209ENST00000522243 ENHOQ6UWT2 76 aa13.59□□□□□ -0.23
SDCBP-209ENST00000522243 NTM-AS1Q6ZSK4 140 aa13.59□□□□□ -0.23
SDCBP-209ENST00000522243 TCTE3Q8IZS6 198 aa13.59□□□□□ -0.23
SDCBP-209ENST00000522243 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.59□□□□□ -0.23
SDCBP-209ENST00000522243 MED9Q9NWA0 146 aa13.59□□□□□ -0.23
SDCBP-209ENST00000522243 ANGP03950 147 aaKnown RBP13.58□□□□□ -0.24
SDCBP-209ENST00000522243 RPS20P60866 119 aaKnown RBP13.58□□□□□ -0.24
SDCBP-209ENST00000522243 ATRAIDQ6UW56 229 aa13.58□□□□□ -0.24
SDCBP-209ENST00000522243 C1orf43Q9BWL3 253 aa13.58□□□□□ -0.24
SDCBP-209ENST00000522243 PDE6DO43924 150 aa13.57□□□□□ -0.24
SDCBP-209ENST00000522243 IFNA1P01562 189 aa13.57□□□□□ -0.24
SDCBP-209ENST00000522243 CRPP02741 224 aa13.57□□□□□ -0.24
SDCBP-209ENST00000522243 Q6ZSA8 131 aa13.57□□□□□ -0.24
SDCBP-209ENST00000522243 TRBV20OR9-2A0A075B6H5 130 aa13.56□□□□□ -0.24
SDCBP-209ENST00000522243 P01737 135 aa13.56□□□□□ -0.24
SDCBP-209ENST00000522243 BCL2P10415 239 aa13.56□□□□□ -0.24
SDCBP-209ENST00000522243 SLC51BQ86UW2 128 aa13.56□□□□□ -0.24
SDCBP-209ENST00000522243 VAX2Q9UIW0 290 aa13.56□□□□□ -0.24
SDCBP-209ENST00000522243 CACNG7P62955 275 aa13.55□□□□□ -0.24
SDCBP-209ENST00000522243 GAGE6Q13070 117 aa13.55□□□□□ -0.24
SDCBP-209ENST00000522243 SMIM12Q96EX1 92 aa13.55□□□□□ -0.24
SDCBP-209ENST00000522243 M0QY20 66 aa13.54□□□□□ -0.24
SDCBP-209ENST00000522243 TMEM97Q5BJF2 176 aa13.54□□□□□ -0.24
SDCBP-209ENST00000522243 SUMO4Q6EEV6 95 aa13.54□□□□□ -0.24
SDCBP-209ENST00000522243 CLPSL2Q6UWE3 100 aa13.54□□□□□ -0.24
SDCBP-209ENST00000522243 LYZL1Q6UWQ5 148 aa13.53□□□□□ -0.24
SDCBP-209ENST00000522243 TRBV25-1A0A075B6N4 114 aa13.52□□□□□ -0.25
SDCBP-209ENST00000522243 XKRY2A2RUG3 117 aa13.52□□□□□ -0.25
SDCBP-209ENST00000522243 HLA-DQA1P01909 254 aa13.52□□□□□ -0.25
SDCBP-209ENST00000522243 PKIAP61925 76 aa13.52□□□□□ -0.25
SDCBP-209ENST00000522243 RBX1P62877 108 aa13.52□□□□□ -0.25
SDCBP-209ENST00000522243 NUDT10Q8NFP7 164 aa13.52□□□□□ -0.25
SDCBP-209ENST00000522243 NUDT11Q96G61 164 aa13.52□□□□□ -0.25
SDCBP-209ENST00000522243 DNAH8Q96JB1 4490 aa13.52□□□□□ -0.25
SDCBP-209ENST00000522243 F2Z2F3 143 aa13.51□□□□□ -0.25
SDCBP-209ENST00000522243 H7C1H1 209 aa13.51□□□□□ -0.25
SDCBP-209ENST00000522243 NKX2-5P52952 324 aaPredicted RBP13.51□□□□□ -0.25
SDCBP-209ENST00000522243 LINC00528Q8N1L1 170 aa13.51□□□□□ -0.25
SDCBP-209ENST00000522243 DEFB104AQ8WTQ1 72 aa13.51□□□□□ -0.25
SDCBP-209ENST00000522243 BIN3Q9NQY0 253 aa13.51□□□□□ -0.25
SDCBP-209ENST00000522243 NTF3P20783 257 aa13.5□□□□□ -0.25
SDCBP-209ENST00000522243 Q6ZNX1 250 aa13.5□□□□□ -0.25
SDCBP-209ENST00000522243 SCXQ7RTU7 201 aa13.5□□□□□ -0.25
SDCBP-209ENST00000522243 IGHV1-24A0A0C4DH33 117 aa13.49□□□□□ -0.25
SDCBP-209ENST00000522243 TRGC1P0CF51 173 aa13.49□□□□□ -0.25
SDCBP-209ENST00000522243 MIAQ16674 131 aa13.49□□□□□ -0.25
SDCBP-209ENST00000522243 IQCJQ1A5X6 159 aa13.49□□□□□ -0.25
SDCBP-209ENST00000522243 C14orf177Q52M58 125 aa13.49□□□□□ -0.25
SDCBP-209ENST00000522243 LINC00269Q8N2A0 174 aa13.49□□□□□ -0.25
SDCBP-209ENST00000522243 USP17L23D6RBM5 183 aa13.48□□□□□ -0.25
SDCBP-209ENST00000522243 RASL11AQ6T310 242 aa13.48□□□□□ -0.25
SDCBP-209ENST00000522243 RNASE7Q9H1E1 156 aaKnown RBP13.48□□□□□ -0.25
SDCBP-209ENST00000522243 DPH3P1Q9H4G8 78 aa13.48□□□□□ -0.25
SDCBP-209ENST00000522243 hCG_2014768A0A024R1R8 64 aa13.47□□□□□ -0.25
SDCBP-209ENST00000522243 PLA2G1BP04054 148 aaKnown RBP13.47□□□□□ -0.25
SDCBP-209ENST00000522243 C9orf62Q8N4C0 152 aa13.47□□□□□ -0.25
SDCBP-209ENST00000522243 OCC1Q8TAD7 63 aa13.47□□□□□ -0.25
SDCBP-209ENST00000522243 PRR34Q9NV39 138 aa13.47□□□□□ -0.25
SDCBP-209ENST00000522243 VPS13BQ7Z7G8 4022 aa13.47□□□□□ -0.25
SDCBP-209ENST00000522243 K7EN84 100 aa13.46□□□□□ -0.25
SDCBP-209ENST00000522243 TAGLN2P37802 199 aaKnown RBP13.46□□□□□ -0.25
SDCBP-209ENST00000522243 RPP21Q9H633 154 aaKnown RBP13.46□□□□□ -0.25
SDCBP-209ENST00000522243 FLG2Q5D862 2391 aaPredicted RBP13.45□□□□□ -0.26
SDCBP-209ENST00000522243 CTRLP40313 264 aa13.45□□□□□ -0.26
SDCBP-209ENST00000522243 TWIST1Q15672 202 aa13.45□□□□□ -0.26
SDCBP-209ENST00000522243 KRTAP26-1Q6PEX3 210 aa13.45□□□□□ -0.26
SDCBP-209ENST00000522243 ALKAL2Q6UX46 152 aa13.45□□□□□ -0.26
SDCBP-209ENST00000522243 AKAP14Q86UN6 197 aa13.45□□□□□ -0.26
SDCBP-209ENST00000522243 CHAC1Q9BUX1 264 aa13.45□□□□□ -0.26
SDCBP-209ENST00000522243 NIT2Q9NQR4 276 aa13.45□□□□□ -0.26
SDCBP-209ENST00000522243 IGLV10-54A0A075B6I4 117 aa13.44□□□□□ -0.26
SDCBP-209ENST00000522243 PRSS1P07477 247 aa13.44□□□□□ -0.26
SDCBP-209ENST00000522243 REG3AQ06141 175 aa13.44□□□□□ -0.26
SDCBP-209ENST00000522243 C20orf203Q8NBC4 194 aa13.44□□□□□ -0.26
SDCBP-209ENST00000522243 CIRBP-AS1Q8TBR5 109 aa13.44□□□□□ -0.26
SDCBP-209ENST00000522243 TMEM243Q9BU79 118 aa13.44□□□□□ -0.26
SDCBP-209ENST00000522243 WDR73Q6P4I2 378 aa13.43□□□□□ -0.26
SDCBP-209ENST00000522243 IGLV4-60A0A075B6I1 120 aa13.42□□□□□ -0.26
SDCBP-209ENST00000522243 TRAV26-2A0A0B4J265 109 aa13.41□□□□□ -0.26
SDCBP-209ENST00000522243 BLOC1S1P78537 153 aa13.41□□□□□ -0.26
SDCBP-209ENST00000522243 GTSF1Q8WW33 167 aa13.41□□□□□ -0.26
SDCBP-209ENST00000522243 CNFNQ9BYD5 112 aa13.41□□□□□ -0.26
SDCBP-209ENST00000522243 GFRA4Q9GZZ7 299 aa13.41□□□□□ -0.26
SDCBP-209ENST00000522243 CEBPGP53567 150 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9526.6 ms