RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 RNASE7Q9H1E1 156 aaKnown RBP11.93□□□□□ -0.5
TRAPPC9-211ENST00000521700 TRBV6-8A0A0A6YYG3 113 aa11.91□□□□□ -0.5
TRAPPC9-211ENST00000521700 TRAV8-3A0A0A6YYJ7 113 aa11.91□□□□□ -0.5
TRAPPC9-211ENST00000521700 TM2D2Q9BX73 214 aa11.91□□□□□ -0.5
TRAPPC9-211ENST00000521700 URGCP-MRPS24S4R325 110 aa11.91□□□□□ -0.5
TRAPPC9-211ENST00000521700 MGPP08493 103 aa11.9□□□□□ -0.5
TRAPPC9-211ENST00000521700 NTF3P20783 257 aa11.9□□□□□ -0.5
TRAPPC9-211ENST00000521700 TOR2AQ5JU69 321 aa11.9□□□□□ -0.5
TRAPPC9-211ENST00000521700 KRTAP4-5Q9BYR2 181 aa11.9□□□□□ -0.5
TRAPPC9-211ENST00000521700 RPP21Q9H633 154 aaKnown RBP11.9□□□□□ -0.5
TRAPPC9-211ENST00000521700 M0QY20 66 aa11.89□□□□□ -0.51
TRAPPC9-211ENST00000521700 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
TRAPPC9-211ENST00000521700 DNAJC30Q96LL9 226 aa11.89□□□□□ -0.51
TRAPPC9-211ENST00000521700 KLK12Q9UKR0 248 aa11.89□□□□□ -0.51
TRAPPC9-211ENST00000521700 A0A087WX48 190 aa11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 CTRLP40313 264 aa11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 CEBPGP53567 150 aa11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 KRTAP10-1P60331 282 aa11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 SUMO4Q6EEV6 95 aa11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 EIF5A2Q9GZV4 153 aaKnown RBP11.88□□□□□ -0.51
TRAPPC9-211ENST00000521700 TMEM262E9PQX1 116 aa11.87□□□□□ -0.51
TRAPPC9-211ENST00000521700 NTM-AS1Q6ZSK4 140 aa11.87□□□□□ -0.51
TRAPPC9-211ENST00000521700 Q8N814 137 aa11.87□□□□□ -0.51
TRAPPC9-211ENST00000521700 FAM210AQ96ND0 272 aa11.87□□□□□ -0.51
TRAPPC9-211ENST00000521700 CNFNQ9BYD5 112 aa11.87□□□□□ -0.51
TRAPPC9-211ENST00000521700 H7C1H1 209 aa11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 NDUFS6O75380 124 aaKnown RBP11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 WFDC2Q14508 124 aa11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 ELOBQ15370 118 aa11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 TWIST1Q15672 202 aa11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 KCNIP4Q6PIL6 250 aa11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 FAM231DQ6ZW35 169 aa11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 GTSF1Q8WW33 167 aa11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 DPH3P1Q9H4G8 78 aa11.86□□□□□ -0.51
TRAPPC9-211ENST00000521700 GATCO43716 136 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-211ENST00000521700 SRP19P09132 144 aaKnown RBP11.85□□□□□ -0.51
TRAPPC9-211ENST00000521700 GCSHP23434 173 aa11.85□□□□□ -0.51
TRAPPC9-211ENST00000521700 TMEM97Q5BJF2 176 aa11.85□□□□□ -0.51
TRAPPC9-211ENST00000521700 NTN5Q8WTR8 489 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC9-211ENST00000521700 IGLV5-52A0A0A0MRZ9 124 aa11.84□□□□□ -0.51
TRAPPC9-211ENST00000521700 RASL11AQ6T310 242 aa11.84□□□□□ -0.51
TRAPPC9-211ENST00000521700 CHCHD5Q9BSY4 110 aa11.84□□□□□ -0.51
TRAPPC9-211ENST00000521700 COX11Q9Y6N1 276 aa11.84□□□□□ -0.51
TRAPPC9-211ENST00000521700 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.52
TRAPPC9-211ENST00000521700 XGP55808 180 aa11.83□□□□□ -0.52
TRAPPC9-211ENST00000521700 MPV17L2Q567V2 206 aa11.83□□□□□ -0.52
TRAPPC9-211ENST00000521700 Q8N1X5 172 aa11.83□□□□□ -0.52
TRAPPC9-211ENST00000521700 RMI2Q96E14 147 aa11.83□□□□□ -0.52
TRAPPC9-211ENST00000521700 SMIM7Q9BQ49 75 aa11.83□□□□□ -0.52
TRAPPC9-211ENST00000521700 ZNF727A8MUV8 499 aa11.82□□□□□ -0.52
TRAPPC9-211ENST00000521700 LECT2O14960 151 aa11.82□□□□□ -0.52
TRAPPC9-211ENST00000521700 ATRAIDQ6UW56 229 aa11.82□□□□□ -0.52
TRAPPC9-211ENST00000521700 LINC01551Q86U37 167 aa11.82□□□□□ -0.52
TRAPPC9-211ENST00000521700 Q8N976 141 aa11.82□□□□□ -0.52
TRAPPC9-211ENST00000521700 BAALCQ8WXS3 180 aa11.82□□□□□ -0.52
TRAPPC9-211ENST00000521700 NIT2Q9NQR4 276 aa11.82□□□□□ -0.52
TRAPPC9-211ENST00000521700 ABCA13Q86UQ4 5058 aa11.81□□□□□ -0.52
TRAPPC9-211ENST00000521700 A8MWL6 223 aa11.81□□□□□ -0.52
TRAPPC9-211ENST00000521700 IQCJQ1A5X6 159 aa11.81□□□□□ -0.52
TRAPPC9-211ENST00000521700 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
TRAPPC9-211ENST00000521700 C15orf54Q8N8G6 183 aa11.81□□□□□ -0.52
TRAPPC9-211ENST00000521700 TRBV25-1A0A075B6N4 114 aa11.8□□□□□ -0.52
TRAPPC9-211ENST00000521700 FOXA3P55318 350 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-211ENST00000521700 PKIAP61925 76 aa11.8□□□□□ -0.52
TRAPPC9-211ENST00000521700 Q0VG73 95 aa11.8□□□□□ -0.52
TRAPPC9-211ENST00000521700 GAGE6Q13070 117 aa11.8□□□□□ -0.52
TRAPPC9-211ENST00000521700 CT83Q5H943 113 aa11.8□□□□□ -0.52
TRAPPC9-211ENST00000521700 TEX261Q6UWH6 196 aa11.8□□□□□ -0.52
TRAPPC9-211ENST00000521700 GATD1Q8NB37 220 aa11.8□□□□□ -0.52
TRAPPC9-211ENST00000521700 PGLYRP4Q96LB8 373 aa11.8□□□□□ -0.52
TRAPPC9-211ENST00000521700 IGHV1-24A0A0C4DH33 117 aa11.79□□□□□ -0.52
TRAPPC9-211ENST00000521700 ANGP03950 147 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-211ENST00000521700 TRAV26-2A0A0B4J265 109 aa11.78□□□□□ -0.52
TRAPPC9-211ENST00000521700 RBX1P62877 108 aa11.78□□□□□ -0.52
TRAPPC9-211ENST00000521700 OSTCQ9NRP0 149 aa11.78□□□□□ -0.52
TRAPPC9-211ENST00000521700 C9JQL5 133 aa11.77□□□□□ -0.53
TRAPPC9-211ENST00000521700 CRPP02741 224 aa11.77□□□□□ -0.53
TRAPPC9-211ENST00000521700 SMIM15Q7Z3B0 74 aa11.77□□□□□ -0.53
TRAPPC9-211ENST00000521700 DEFB104AQ8WTQ1 72 aa11.77□□□□□ -0.53
TRAPPC9-211ENST00000521700 FRZBQ92765 325 aa11.77□□□□□ -0.53
TRAPPC9-211ENST00000521700 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-211ENST00000521700 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-211ENST00000521700 TSKUQ8WUA8 353 aa11.76□□□□□ -0.53
TRAPPC9-211ENST00000521700 C1orf43Q9BWL3 253 aa11.76□□□□□ -0.53
TRAPPC9-211ENST00000521700 TMEM241Q24JQ0 296 aa11.75□□□□□ -0.53
TRAPPC9-211ENST00000521700 FAM74A3Q4VXF1 159 aa11.75□□□□□ -0.53
TRAPPC9-211ENST00000521700 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
TRAPPC9-211ENST00000521700 GFRA4Q9GZZ7 299 aa11.75□□□□□ -0.53
TRAPPC9-211ENST00000521700 PRR34Q9NV39 138 aa11.75□□□□□ -0.53
TRAPPC9-211ENST00000521700 HIGD1CA8MV81 97 aa11.74□□□□□ -0.53
TRAPPC9-211ENST00000521700 MIAQ16674 131 aa11.74□□□□□ -0.53
TRAPPC9-211ENST00000521700 LINC00269Q8N2A0 174 aa11.74□□□□□ -0.53
TRAPPC9-211ENST00000521700 ISOC2Q96AB3 205 aa11.74□□□□□ -0.53
TRAPPC9-211ENST00000521700 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-211ENST00000521700 TMEM70Q9BUB7 260 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms