RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 NPCDR1Q9BY65 106 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 ARID1AO14497 2285 aa4.27□□□□□ -1.73
NUDCD1-204ENST00000521439 BUB1B-PAK6H3BSN5 160 aa4.27□□□□□ -1.73
NUDCD1-204ENST00000521439 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
NUDCD1-204ENST00000521439 RBM3P98179 157 aaKnown RBP4.27□□□□□ -1.73
NUDCD1-204ENST00000521439 REG3AQ06141 175 aa4.27□□□□□ -1.73
NUDCD1-204ENST00000521439 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
NUDCD1-204ENST00000521439 DIRC1Q969H9 104 aa4.27□□□□□ -1.73
NUDCD1-204ENST00000521439 ZNF414Q96IQ9 312 aa4.27□□□□□ -1.73
NUDCD1-204ENST00000521439 SLC50A1Q9BRV3 221 aa4.27□□□□□ -1.73
NUDCD1-204ENST00000521439 MYOFQ9NZM1 2061 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 C17orf51A8MQB3 221 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 H0YGG7 62 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 H3BSH0 61 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 PEX7O00628 323 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 BLCAPP62952 87 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 RPS21P63220 83 aaKnown RBP4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 C10orf128Q5T292 105 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 ATP11AUNQ6ZP68 121 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 ZNF818PQ6ZRF7 136 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 GPHB5Q86YW7 130 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 MED12LQ86YW9 2145 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 DEC1Q9P2X7 70 aa4.26□□□□□ -1.73
NUDCD1-204ENST00000521439 TRAV3A0A0B4J244 114 aa4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 A0A0B4J2C4 111 aa4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 IGHV3-64DA0A0J9YX35 117 aa4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 IGKV3-11P04433 115 aa4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 PRM2P04554 102 aa4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 FXYD4P59646 89 aa4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 RBMY1FQ15415 496 aaKnown RBP4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 LINC00167Q96N53 147 aa4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 ZNF706Q9Y5V0 76 aaPredicted RBP4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 MYO7BQ6PIF6 2116 aa4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 DOCK11Q5JSL3 2073 aa4.25□□□□□ -1.73
NUDCD1-204ENST00000521439 IGLV3-32A0A0A0MS00 114 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 LOC107984156A0A0G2JMH3 177 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 C19orf71A6NCJ1 209 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 IGKV1-39P01597 117 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 IGKV1D-39P04432 117 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 IGHV3-43DP0DP04 118 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 SCXQ7RTU7 201 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 ARL17AQ8IVW1 177 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 CYSTM1Q9H1C7 97 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 TMEM167BQ9NRX6 74 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 MRPL35Q9NZE8 188 aaKnown RBP4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 ALPK2Q86TB3 2170 aa4.24□□□□□ -1.73
NUDCD1-204ENST00000521439 NCOA6Q14686 2063 aaPredicted RBP4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 TMSB15BA0A087X1C1 80 aa4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 TRBV10-2A0A0K0K1G8 114 aa4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 A0A1W2PNU3 283 aaPredicted RBP4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 LTAP01374 205 aa4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 MGST1P10620 155 aaKnown RBP4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 RNASE4P34096 147 aaKnown RBP4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 RHOHQ15669 191 aa4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 ATXN8Q156A1 80 aa4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 Q1T7F1 81 aa4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 SDIM1Q6ZPB5 146 aa4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 Q8N9L7 120 aa4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 DYNLRB2Q8TF09 96 aa4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 RNASE6Q93091 150 aaKnown RBP4.23□□□□□ -1.73
NUDCD1-204ENST00000521439 IGKV3D-11A0A0A0MRZ8 115 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 TRAV13-2A0A0B4J235 113 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 IGLV2-8P01709 118 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 STATHP02808 62 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 CCL4P13236 92 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 XCL1P47992 114 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 FGF12P61328 243 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 EIF4EBP1Q13541 118 aaPredicted RBP4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 C16orf47Q6ZP98 133 aaPredicted RBP4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 FAM216BQ8N7L0 139 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 LINC00474Q9P2X8 69 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 TNRC6BQ9UPQ9 1833 aaKnown RBP4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 PCDH15Q96QU1 1955 aa4.22□□□□□ -1.73
NUDCD1-204ENST00000521439 LRP4O75096 1905 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 IGKV1-27A0A075B6S5 117 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 IGKV1-6A0A0C4DH72 117 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 IGKV1-12A0A0C4DH73 117 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 E7EQL1 145 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 H7BZZ5 65 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 M0R135 149 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 IGKV1D-12P01611 117 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 KLKP1Q107X0 134 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 ESRGQ1W209 222 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 SPANXN5Q5MJ07 72 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 S100A7L2Q5SY68 101 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 FAM27BQ5VT28 67 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 NDUFA11Q86Y39 141 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 C2orf16Q68DN1 1984 aa4.21□□□□□ -1.74
NUDCD1-204ENST00000521439 GOLGA4Q13439 2230 aaKnown RBP4.2□□□□□ -1.74
NUDCD1-204ENST00000521439 TRBV25-1A0A075B6N4 114 aa4.2□□□□□ -1.74
NUDCD1-204ENST00000521439 SAA1P0DJI8 122 aaPredicted RBP4.2□□□□□ -1.74
NUDCD1-204ENST00000521439 ARL14EPLP0DKL9 152 aa4.2□□□□□ -1.74
NUDCD1-204ENST00000521439 CD28P10747 220 aa4.2□□□□□ -1.74
NUDCD1-204ENST00000521439 IAPPP10997 89 aa4.2□□□□□ -1.74
NUDCD1-204ENST00000521439 IFI27P40305 119 aaPredicted RBP4.2□□□□□ -1.74
NUDCD1-204ENST00000521439 ZNF138P52744 262 aa4.2□□□□□ -1.74
NUDCD1-204ENST00000521439 MRPL51Q4U2R6 128 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms