RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 KIR2DL5BQ8NHK3 375 aa10.43□□□□□ -0.74
CLN8-204ENST00000519254 IL17DQ8TAD2 202 aa10.43□□□□□ -0.74
CLN8-204ENST00000519254 ST20Q9HBF5 79 aa10.43□□□□□ -0.74
CLN8-204ENST00000519254 TRBV6-5A0A0K0K1A5 114 aa10.42□□□□□ -0.74
CLN8-204ENST00000519254 C20orf202A1L168 122 aa10.42□□□□□ -0.74
CLN8-204ENST00000519254 RNASE8Q8TDE3 154 aaKnown RBP10.42□□□□□ -0.74
CLN8-204ENST00000519254 TRAV9-2A0A087WT02 112 aa10.42□□□□□ -0.74
CLN8-204ENST00000519254 A8MWV9 139 aa10.42□□□□□ -0.74
CLN8-204ENST00000519254 SPATA45Q537H7 98 aa10.42□□□□□ -0.74
CLN8-204ENST00000519254 NEGR1Q7Z3B1 354 aa10.42□□□□□ -0.74
CLN8-204ENST00000519254 C18orf15Q96N68 181 aa10.42□□□□□ -0.74
CLN8-204ENST00000519254 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
CLN8-204ENST00000519254 K7EMI3 77 aa10.41□□□□□ -0.74
CLN8-204ENST00000519254 ORMDL2Q53FV1 153 aa10.41□□□□□ -0.74
CLN8-204ENST00000519254 CFAP126Q5VTH2 177 aa10.41□□□□□ -0.74
CLN8-204ENST00000519254 PMCHL2Q9BQD1 86 aa10.41□□□□□ -0.74
CLN8-204ENST00000519254 A8MZ25 164 aa10.4□□□□□ -0.74
CLN8-204ENST00000519254 K7EIL1 84 aa10.4□□□□□ -0.74
CLN8-204ENST00000519254 NUDT3O95989 172 aa10.4□□□□□ -0.74
CLN8-204ENST00000519254 ZNF705AQ6ZN79 300 aaPredicted RBP10.4□□□□□ -0.74
CLN8-204ENST00000519254 EDA2RQ9HAV5 297 aa10.4□□□□□ -0.74
CLN8-204ENST00000519254 IGHV3-73A0A0B4J1V6 119 aa10.39□□□□□ -0.75
CLN8-204ENST00000519254 SDHAF1A6NFY7 115 aa10.39□□□□□ -0.75
CLN8-204ENST00000519254 DEFB121Q5J5C9 76 aa10.39□□□□□ -0.75
CLN8-204ENST00000519254 TMEM263Q8WUH6 116 aaKnown RBP10.39□□□□□ -0.75
CLN8-204ENST00000519254 MGAM2Q2M2H8 2515 aa10.39□□□□□ -0.75
CLN8-204ENST00000519254 VCYO14598 125 aa10.39□□□□□ -0.75
CLN8-204ENST00000519254 RS1O15537 224 aa10.39□□□□□ -0.75
CLN8-204ENST00000519254 LGALS9BQ3B8N2 356 aa10.39□□□□□ -0.75
CLN8-204ENST00000519254 LGALS9CQ6DKI2 356 aa10.39□□□□□ -0.75
CLN8-204ENST00000519254 Q6ZSN1 163 aa10.39□□□□□ -0.75
CLN8-204ENST00000519254 NOTCH1P46531 2555 aa10.38□□□□□ -0.75
CLN8-204ENST00000519254 TRBV27A0A0K0K1C4 114 aa10.38□□□□□ -0.75
CLN8-204ENST00000519254 RRN3P1Q2M238 152 aa10.38□□□□□ -0.75
CLN8-204ENST00000519254 TOMM6Q96B49 74 aa10.38□□□□□ -0.75
CLN8-204ENST00000519254 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
CLN8-204ENST00000519254 DNAH3Q8TD57 4116 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 hDV102S1A0JD36 115 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 PLAC8L1A1L4L8 177 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 MIEN1Q9BRT3 115 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 H7C1H1 209 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 ATP5LO75964 103 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 P0DMU3 169 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 FAM231AP0DMU4 169 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 FAM231CP0DMU5 169 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 DEFB104AQ8WTQ1 72 aa10.37□□□□□ -0.75
CLN8-204ENST00000519254 TRGV1A0A0A0MS02 117 aa10.36□□□□□ -0.75
CLN8-204ENST00000519254 RHODO00212 210 aa10.36□□□□□ -0.75
CLN8-204ENST00000519254 IGLC3P0DOY3 106 aa10.36□□□□□ -0.75
CLN8-204ENST00000519254 EMP1P54849 157 aa10.36□□□□□ -0.75
CLN8-204ENST00000519254 ZFP2Q6ZN57 461 aa10.36□□□□□ -0.75
CLN8-204ENST00000519254 OR11H2Q8NH07 326 aa10.36□□□□□ -0.75
CLN8-204ENST00000519254 C16orf74Q96GX8 76 aa10.36□□□□□ -0.75
CLN8-204ENST00000519254 RETNQ9HD89 108 aa10.36□□□□□ -0.75
CLN8-204ENST00000519254 X6R8D5 127 aa10.36□□□□□ -0.75
CLN8-204ENST00000519254 PRSS1P07477 247 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 DAZ2Q13117 558 aaKnown RBP10.35□□□□□ -0.75
CLN8-204ENST00000519254 C2orf66Q6UXQ4 117 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 Q6ZTI0 123 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 RNF183Q96D59 192 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 C14orf144Q96I85 54 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 KIR2DL4Q99706 377 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 Q9UF83 564 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 DNHD1Q96M86 4753 aa10.35□□□□□ -0.75
CLN8-204ENST00000519254 IGHV3-53P01767 116 aa10.34□□□□□ -0.75
CLN8-204ENST00000519254 DEFA6Q01524 100 aa10.34□□□□□ -0.75
CLN8-204ENST00000519254 ODF1Q14990 250 aa10.34□□□□□ -0.75
CLN8-204ENST00000519254 NOP10Q9NPE3 64 aaKnown RBP10.34□□□□□ -0.75
CLN8-204ENST00000519254 SCGB3A1Q96QR1 104 aa10.34□□□□□ -0.75
CLN8-204ENST00000519254 NBEAL1Q6ZS30 2694 aa10.33□□□□□ -0.76
CLN8-204ENST00000519254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.33□□□□□ -0.76
CLN8-204ENST00000519254 DEFB4AO15263 64 aa10.33□□□□□ -0.76
CLN8-204ENST00000519254 TSHBP01222 138 aa10.33□□□□□ -0.76
CLN8-204ENST00000519254 OR4C5Q8NGB2 326 aa10.33□□□□□ -0.76
CLN8-204ENST00000519254 OVOL2Q9BRP0 275 aa10.33□□□□□ -0.76
CLN8-204ENST00000519254 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
CLN8-204ENST00000519254 SMIM9A6NGZ8 99 aa10.32□□□□□ -0.76
CLN8-204ENST00000519254 I3L3M4 83 aa10.32□□□□□ -0.76
CLN8-204ENST00000519254 SBSPONQ8IVN8 264 aa10.32□□□□□ -0.76
CLN8-204ENST00000519254 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
CLN8-204ENST00000519254 ZNF479Q96JC4 524 aa10.32□□□□□ -0.76
CLN8-204ENST00000519254 UQCR10Q9UDW1 63 aa10.32□□□□□ -0.76
CLN8-204ENST00000519254 CYSLTR1Q9Y271 337 aa10.32□□□□□ -0.76
CLN8-204ENST00000519254 HSBP1L1C9JCN9 74 aa10.31□□□□□ -0.76
CLN8-204ENST00000519254 G0S2P27469 103 aa10.31□□□□□ -0.76
CLN8-204ENST00000519254 RPL39P62891 51 aaKnown RBP10.31□□□□□ -0.76
CLN8-204ENST00000519254 RHOHQ15669 191 aa10.31□□□□□ -0.76
CLN8-204ENST00000519254 ERASQ7Z444 233 aa10.31□□□□□ -0.76
CLN8-204ENST00000519254 TRAV4A0A0B4J268 109 aa10.31□□□□□ -0.76
CLN8-204ENST00000519254 IGHV4-28A0A0C4DH34 117 aa10.31□□□□□ -0.76
CLN8-204ENST00000519254 TP53TG1Q9Y2A0 90 aa10.31□□□□□ -0.76
CLN8-204ENST00000519254 TNFRSF18Q9Y5U5 241 aa10.31□□□□□ -0.76
CLN8-204ENST00000519254 A0A087WX48 190 aa10.3□□□□□ -0.76
CLN8-204ENST00000519254 IGIPA6NJ69 53 aa10.3□□□□□ -0.76
CLN8-204ENST00000519254 Q6ZN92 141 aa10.3□□□□□ -0.76
CLN8-204ENST00000519254 TRAV12-1A0A0B4J245 112 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 LINC01549A6NIU2 74 aa10.29□□□□□ -0.76
CLN8-204ENST00000519254 MIFP14174 115 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms