RNA–Protein interactions for RNA: ENST00000518840.5

R3HCC1-204, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene R3HCC1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-204ENST00000518840 KIF25-AS1Q9Y6Z4 181 aa12.08□□□□□ -0.48
R3HCC1-204ENST00000518840 USP17L23D6RBM5 183 aa12.07□□□□□ -0.48
R3HCC1-204ENST00000518840 CRPP02741 224 aa12.07□□□□□ -0.48
R3HCC1-204ENST00000518840 F5H697 171 aa12.06□□□□□ -0.48
R3HCC1-204ENST00000518840 ZNF345Q14585 488 aa12.06□□□□□ -0.48
R3HCC1-204ENST00000518840 C14orf177Q52M58 125 aa12.06□□□□□ -0.48
R3HCC1-204ENST00000518840 SPANXN1Q5VSR9 72 aa12.06□□□□□ -0.48
R3HCC1-204ENST00000518840 VAX2Q9UIW0 290 aa12.06□□□□□ -0.48
R3HCC1-204ENST00000518840 UMAD1C9J7I0 102 aa12.05□□□□□ -0.48
R3HCC1-204ENST00000518840 PFDN1O60925 122 aa12.05□□□□□ -0.48
R3HCC1-204ENST00000518840 IGLV2-8P01709 118 aa12.05□□□□□ -0.48
R3HCC1-204ENST00000518840 HLA-DQA1P01909 254 aa12.05□□□□□ -0.48
R3HCC1-204ENST00000518840 PRSS1P07477 247 aa12.05□□□□□ -0.48
R3HCC1-204ENST00000518840 KRTAP26-1Q6PEX3 210 aa12.05□□□□□ -0.48
R3HCC1-204ENST00000518840 TMUB2Q71RG4 321 aa12.05□□□□□ -0.48
R3HCC1-204ENST00000518840 FAT3Q8TDW7 4589 aa12.04□□□□□ -0.48
R3HCC1-204ENST00000518840 RBX1P62877 108 aa12.04□□□□□ -0.48
R3HCC1-204ENST00000518840 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
R3HCC1-204ENST00000518840 PRR34Q9NV39 138 aa12.04□□□□□ -0.48
R3HCC1-204ENST00000518840 GAGE6Q13070 117 aa12.03□□□□□ -0.48
R3HCC1-204ENST00000518840 MIAQ16674 131 aa12.03□□□□□ -0.48
R3HCC1-204ENST00000518840 DERL1Q9BUN8 251 aa12.03□□□□□ -0.48
R3HCC1-204ENST00000518840 H2AFB1P0C5Y9 115 aa12.02□□□□□ -0.49
R3HCC1-204ENST00000518840 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
R3HCC1-204ENST00000518840 PKHD1L1Q86WI1 4243 aa12.01□□□□□ -0.49
R3HCC1-204ENST00000518840 HMSDA8MTL9 139 aa12.01□□□□□ -0.49
R3HCC1-204ENST00000518840 BCL2L11O43521 198 aa12.01□□□□□ -0.49
R3HCC1-204ENST00000518840 GZMBP10144 247 aa12.01□□□□□ -0.49
R3HCC1-204ENST00000518840 PKIAP61925 76 aa12.01□□□□□ -0.49
R3HCC1-204ENST00000518840 CCL20P78556 96 aa12.01□□□□□ -0.49
R3HCC1-204ENST00000518840 LINC00269Q8N2A0 174 aa12.01□□□□□ -0.49
R3HCC1-204ENST00000518840 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
R3HCC1-204ENST00000518840 AP1S3Q96PC3 154 aa12.01□□□□□ -0.49
R3HCC1-204ENST00000518840 HMCN2Q8NDA2 5059 aa12□□□□□ -0.49
R3HCC1-204ENST00000518840 M0QY20 66 aa12□□□□□ -0.49
R3HCC1-204ENST00000518840 IGLC6P0CF74 106 aa12□□□□□ -0.49
R3HCC1-204ENST00000518840 SMIM17P0DL12 118 aa12□□□□□ -0.49
R3HCC1-204ENST00000518840 HNRNPA3P51991 378 aaKnown RBP12□□□□□ -0.49
R3HCC1-204ENST00000518840 TMEM97Q5BJF2 176 aa12□□□□□ -0.49
R3HCC1-204ENST00000518840 C9orf163Q8N9P6 203 aa12□□□□□ -0.49
R3HCC1-204ENST00000518840 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12□□□□□ -0.49
R3HCC1-204ENST00000518840 TRBV25-1A0A075B6N4 114 aa11.99□□□□□ -0.49
R3HCC1-204ENST00000518840 A0A0D9SG52 128 aa11.99□□□□□ -0.49
R3HCC1-204ENST00000518840 PANO1I0J062 215 aa11.99□□□□□ -0.49
R3HCC1-204ENST00000518840 OXTP01178 125 aa11.99□□□□□ -0.49
R3HCC1-204ENST00000518840 IQCJQ1A5X6 159 aa11.99□□□□□ -0.49
R3HCC1-204ENST00000518840 DGAT2L7PQ6IED9 249 aa11.99□□□□□ -0.49
R3HCC1-204ENST00000518840 C11orf52Q96A22 123 aa11.99□□□□□ -0.49
R3HCC1-204ENST00000518840 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
R3HCC1-204ENST00000518840 RPL37AP61513 92 aaKnown RBP11.98□□□□□ -0.49
R3HCC1-204ENST00000518840 CENPWQ5EE01 88 aa11.98□□□□□ -0.49
R3HCC1-204ENST00000518840 DAZAP1Q96EP5 407 aaKnown RBP11.98□□□□□ -0.49
R3HCC1-204ENST00000518840 GNG13Q9P2W3 67 aa11.98□□□□□ -0.49
R3HCC1-204ENST00000518840 MGPP08493 103 aa11.97□□□□□ -0.49
R3HCC1-204ENST00000518840 SUMO4Q6EEV6 95 aa11.97□□□□□ -0.49
R3HCC1-204ENST00000518840 FER1L6-AS1Q8NA97 138 aa11.97□□□□□ -0.49
R3HCC1-204ENST00000518840 C20orf203Q8NBC4 194 aa11.97□□□□□ -0.49
R3HCC1-204ENST00000518840 TPPP3Q9BW30 176 aa11.97□□□□□ -0.49
R3HCC1-204ENST00000518840 IGLV10-54A0A075B6I4 117 aa11.96□□□□□ -0.49
R3HCC1-204ENST00000518840 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.49
R3HCC1-204ENST00000518840 C19orf71A6NCJ1 209 aa11.96□□□□□ -0.49
R3HCC1-204ENST00000518840 SERTAD4-AS1Q5TG53 156 aa11.96□□□□□ -0.49
R3HCC1-204ENST00000518840 SDIM1Q6ZPB5 146 aa11.96□□□□□ -0.49
R3HCC1-204ENST00000518840 OR2D3Q8NGH3 330 aa11.96□□□□□ -0.49
R3HCC1-204ENST00000518840 RAB19A4D1S5 217 aa11.95□□□□□ -0.5
R3HCC1-204ENST00000518840 EIF5AP63241 154 aaKnown RBP11.95□□□□□ -0.5
R3HCC1-204ENST00000518840 REG3AQ06141 175 aa11.95□□□□□ -0.5
R3HCC1-204ENST00000518840 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
R3HCC1-204ENST00000518840 MANBALQ9NQG1 85 aa11.95□□□□□ -0.5
R3HCC1-204ENST00000518840 IGLV4-60A0A075B6I1 120 aa11.94□□□□□ -0.5
R3HCC1-204ENST00000518840 TRAV1-1A0A0B4J248 108 aa11.94□□□□□ -0.5
R3HCC1-204ENST00000518840 NKX2-5P52952 324 aaPredicted RBP11.94□□□□□ -0.5
R3HCC1-204ENST00000518840 RPS20P60866 119 aaKnown RBP11.93□□□□□ -0.5
R3HCC1-204ENST00000518840 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
R3HCC1-204ENST00000518840 H7C1H1 209 aa11.92□□□□□ -0.5
R3HCC1-204ENST00000518840 CACNG7P62955 275 aa11.92□□□□□ -0.5
R3HCC1-204ENST00000518840 CLRN3Q8NCR9 226 aa11.92□□□□□ -0.5
R3HCC1-204ENST00000518840 SLPIP03973 132 aa11.91□□□□□ -0.5
R3HCC1-204ENST00000518840 RASL11AQ6T310 242 aa11.91□□□□□ -0.5
R3HCC1-204ENST00000518840 TMEM243Q9BU79 118 aa11.91□□□□□ -0.5
R3HCC1-204ENST00000518840 A0A1B0GUV1 79 aa11.9□□□□□ -0.5
R3HCC1-204ENST00000518840 GNG4P50150 75 aa11.9□□□□□ -0.5
R3HCC1-204ENST00000518840 CNBPP62633 177 aaKnown RBP11.9□□□□□ -0.5
R3HCC1-204ENST00000518840 LYZL1Q6UWQ5 148 aa11.9□□□□□ -0.5
R3HCC1-204ENST00000518840 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
R3HCC1-204ENST00000518840 hDV102S1A0JD36 115 aa11.89□□□□□ -0.51
R3HCC1-204ENST00000518840 F2Z2F3 143 aa11.89□□□□□ -0.51
R3HCC1-204ENST00000518840 P01737 135 aa11.89□□□□□ -0.51
R3HCC1-204ENST00000518840 RAB5CP51148 216 aa11.89□□□□□ -0.51
R3HCC1-204ENST00000518840 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
R3HCC1-204ENST00000518840 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
R3HCC1-204ENST00000518840 PGLYRP4Q96LB8 373 aa11.89□□□□□ -0.51
R3HCC1-204ENST00000518840 NIT2Q9NQR4 276 aa11.89□□□□□ -0.51
R3HCC1-204ENST00000518840 NTF3P20783 257 aa11.88□□□□□ -0.51
R3HCC1-204ENST00000518840 MEF2BQ02080 365 aaPredicted RBP11.88□□□□□ -0.51
R3HCC1-204ENST00000518840 DPH3P1Q9H4G8 78 aa11.88□□□□□ -0.51
R3HCC1-204ENST00000518840 IFNA1P01562 189 aa11.87□□□□□ -0.51
R3HCC1-204ENST00000518840 TRGC1P0CF51 173 aa11.87□□□□□ -0.51
R3HCC1-204ENST00000518840 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
R3HCC1-204ENST00000518840 C9orf62Q8N4C0 152 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms