RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 LINC00694P0DN24 101 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 RAB4AP20338 218 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 GAGE1Q13065 139 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 GAGE4Q13068 117 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 GAGE5Q13069 117 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 GAGE13Q4V321 117 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 FAM104BQ5XKR9 115 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 NEGR1Q7Z3B1 354 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 SH2D6Q7Z4S9 175 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 NEXN-AS1Q8NBZ9 246 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 FRZBQ92765 325 aa12.28□□□□□ -0.44
TRAM1-202ENST00000518678 FRAS1Q86XX4 4008 aa12.27□□□□□ -0.44
TRAM1-202ENST00000518678 TRAV26-2A0A0B4J265 109 aa12.27□□□□□ -0.45
TRAM1-202ENST00000518678 RPL36AP83881 106 aaKnown RBP12.27□□□□□ -0.45
TRAM1-202ENST00000518678 RASL11AQ6T310 242 aa12.27□□□□□ -0.45
TRAM1-202ENST00000518678 RPL36ALQ969Q0 106 aaKnown RBP12.27□□□□□ -0.45
TRAM1-202ENST00000518678 VPS13DQ5THJ4 4388 aa12.27□□□□□ -0.45
TRAM1-202ENST00000518678 DNAH10Q8IVF4 4471 aa12.27□□□□□ -0.45
TRAM1-202ENST00000518678 TRBV7-3A0A075B6L6 115 aa12.26□□□□□ -0.45
TRAM1-202ENST00000518678 ZNRF2Q8NHG8 242 aa12.26□□□□□ -0.45
TRAM1-202ENST00000518678 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
TRAM1-202ENST00000518678 ESRGQ1W209 222 aa12.25□□□□□ -0.45
TRAM1-202ENST00000518678 MRPL51Q4U2R6 128 aaKnown RBP12.25□□□□□ -0.45
TRAM1-202ENST00000518678 LGALS9CQ6DKI2 356 aa12.25□□□□□ -0.45
TRAM1-202ENST00000518678 MRAP2Q96G30 205 aa12.25□□□□□ -0.45
TRAM1-202ENST00000518678 NIT2Q9NQR4 276 aa12.25□□□□□ -0.45
TRAM1-202ENST00000518678 CCL18P55774 89 aa12.24□□□□□ -0.45
TRAM1-202ENST00000518678 UBE2D3P61077 147 aa12.24□□□□□ -0.45
TRAM1-202ENST00000518678 UBE2D2P62837 147 aa12.24□□□□□ -0.45
TRAM1-202ENST00000518678 ELOBQ15370 118 aa12.24□□□□□ -0.45
TRAM1-202ENST00000518678 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
TRAM1-202ENST00000518678 TIRAPP58753 221 aa12.23□□□□□ -0.45
TRAM1-202ENST00000518678 LYPD5Q6UWN5 251 aa12.23□□□□□ -0.45
TRAM1-202ENST00000518678 LINC00476Q8WZB0 136 aa12.23□□□□□ -0.45
TRAM1-202ENST00000518678 SMCO4Q9NRQ5 59 aa12.23□□□□□ -0.45
TRAM1-202ENST00000518678 TNFRSF18Q9Y5U5 241 aa12.23□□□□□ -0.45
TRAM1-202ENST00000518678 GAS8-AS1O95177 125 aa12.22□□□□□ -0.45
TRAM1-202ENST00000518678 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
TRAM1-202ENST00000518678 UBE2DNLQ8IWF7 75 aa12.22□□□□□ -0.45
TRAM1-202ENST00000518678 RPL39LQ96EH5 51 aaKnown RBP12.22□□□□□ -0.45
TRAM1-202ENST00000518678 LINC00588Q9Y4M8 146 aa12.22□□□□□ -0.45
TRAM1-202ENST00000518678 TRBV24-1A0A075B6N3 115 aa12.21□□□□□ -0.45
TRAM1-202ENST00000518678 TGIF2-C20orf24A0A0A6YYL0 155 aa12.21□□□□□ -0.45
TRAM1-202ENST00000518678 SMKR1H3BMG3 65 aa12.21□□□□□ -0.45
TRAM1-202ENST00000518678 NCR2O95944 276 aa12.21□□□□□ -0.45
TRAM1-202ENST00000518678 COX19Q49B96 90 aa12.21□□□□□ -0.45
TRAM1-202ENST00000518678 YPEL4Q96NS1 127 aa12.21□□□□□ -0.45
TRAM1-202ENST00000518678 GTSF1LQ9H1H1 148 aa12.21□□□□□ -0.45
TRAM1-202ENST00000518678 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
TRAM1-202ENST00000518678 LY6G6CO95867 125 aa12.2□□□□□ -0.46
TRAM1-202ENST00000518678 OR10J3Q5JRS4 329 aa12.2□□□□□ -0.46
TRAM1-202ENST00000518678 CBLN2Q8IUK8 224 aa12.2□□□□□ -0.46
TRAM1-202ENST00000518678 MRPS16Q9Y3D3 137 aaKnown RBP12.2□□□□□ -0.46
TRAM1-202ENST00000518678 PPP1R17O96001 155 aa12.19□□□□□ -0.46
TRAM1-202ENST00000518678 PPBPP02775 128 aa12.19□□□□□ -0.46
TRAM1-202ENST00000518678 CKS2P33552 79 aa12.19□□□□□ -0.46
TRAM1-202ENST00000518678 RPS10P46783 165 aaKnown RBP12.19□□□□□ -0.46
TRAM1-202ENST00000518678 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
TRAM1-202ENST00000518678 GNB1LQ9BYB4 327 aa12.19□□□□□ -0.46
TRAM1-202ENST00000518678 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
TRAM1-202ENST00000518678 IGHV3-38A0A0C4DH36 116 aa12.18□□□□□ -0.46
TRAM1-202ENST00000518678 ATP6V1G1O75348 118 aa12.18□□□□□ -0.46
TRAM1-202ENST00000518678 HLA-DQA1P01909 254 aa12.18□□□□□ -0.46
TRAM1-202ENST00000518678 NRACQ8N912 160 aa12.18□□□□□ -0.46
TRAM1-202ENST00000518678 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.18□□□□□ -0.46
TRAM1-202ENST00000518678 UPK3BQ9BT76 320 aa12.18□□□□□ -0.46
TRAM1-202ENST00000518678 D6R8Y8 96 aa12.17□□□□□ -0.46
TRAM1-202ENST00000518678 S100A1P23297 94 aa12.17□□□□□ -0.46
TRAM1-202ENST00000518678 LELP1Q5T871 98 aa12.17□□□□□ -0.46
TRAM1-202ENST00000518678 ORMDL3Q8N138 153 aa12.17□□□□□ -0.46
TRAM1-202ENST00000518678 ST20Q9HBF5 79 aa12.17□□□□□ -0.46
TRAM1-202ENST00000518678 SDHAF1A6NFY7 115 aa12.16□□□□□ -0.46
TRAM1-202ENST00000518678 APCSP02743 223 aa12.16□□□□□ -0.46
TRAM1-202ENST00000518678 MT-ND6P03923 174 aa12.16□□□□□ -0.46
TRAM1-202ENST00000518678 DNAH6Q9C0G6 4158 aa12.15□□□□□ -0.46
TRAM1-202ENST00000518678 PHOX2AO14813 284 aa12.15□□□□□ -0.46
TRAM1-202ENST00000518678 TNFRSF6BO95407 300 aa12.15□□□□□ -0.46
TRAM1-202ENST00000518678 TMEM97Q5BJF2 176 aa12.15□□□□□ -0.46
TRAM1-202ENST00000518678 PRELID3AQ96N28 172 aa12.15□□□□□ -0.46
TRAM1-202ENST00000518678 POLR2KP53803 58 aaKnown RBP12.14□□□□□ -0.47
TRAM1-202ENST00000518678 SUMO2P61956 95 aaKnown RBP12.14□□□□□ -0.47
TRAM1-202ENST00000518678 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
TRAM1-202ENST00000518678 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
TRAM1-202ENST00000518678 TRBV6-8A0A0A6YYG3 113 aa12.13□□□□□ -0.47
TRAM1-202ENST00000518678 TRAV8-6A0A0B4J262 113 aa12.13□□□□□ -0.47
TRAM1-202ENST00000518678 NPYP01303 97 aa12.13□□□□□ -0.47
TRAM1-202ENST00000518678 NTM-AS1Q6ZSK4 140 aa12.13□□□□□ -0.47
TRAM1-202ENST00000518678 MRPL18Q9H0U6 180 aaKnown RBP12.13□□□□□ -0.47
TRAM1-202ENST00000518678 LAMTOR2Q9Y2Q5 125 aa12.13□□□□□ -0.47
TRAM1-202ENST00000518678 I3L3M4 83 aa12.12□□□□□ -0.47
TRAM1-202ENST00000518678 SCO1O75880 301 aa12.12□□□□□ -0.47
TRAM1-202ENST00000518678 RPL32P62910 135 aaKnown RBP12.12□□□□□ -0.47
TRAM1-202ENST00000518678 COTL1Q14019 142 aa12.12□□□□□ -0.47
TRAM1-202ENST00000518678 KIAA1644Q3SXP7 199 aa12.12□□□□□ -0.47
TRAM1-202ENST00000518678 WFDC10BQ8IUB3 73 aa12.12□□□□□ -0.47
TRAM1-202ENST00000518678 TRBV27A0A0K0K1C4 114 aa12.11□□□□□ -0.47
TRAM1-202ENST00000518678 VCYO14598 125 aa12.11□□□□□ -0.47
TRAM1-202ENST00000518678 SIVA1O15304 175 aa12.11□□□□□ -0.47
TRAM1-202ENST00000518678 PMCHP20382 165 aa12.11□□□□□ -0.47
TRAM1-202ENST00000518678 FABP9Q0Z7S8 132 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms