RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 Q9H521 79 aa3.83□□□□□ -1.8
CCDC6-203ENST00000518638 PSENENQ9NZ42 101 aa3.83□□□□□ -1.8
CCDC6-203ENST00000518638 TMEM14CQ9P0S9 112 aa3.83□□□□□ -1.8
CCDC6-203ENST00000518638 KLK12Q9UKR0 248 aa3.83□□□□□ -1.8
CCDC6-203ENST00000518638 RAB26Q9ULW5 256 aa3.83□□□□□ -1.8
CCDC6-203ENST00000518638 IGKV2-40A0A087WW87 121 aaPredicted RBP3.82□□□□□ -1.8
CCDC6-203ENST00000518638 RAB19A4D1S5 217 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 HPGDSO60760 199 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 NDUFS6O75380 124 aaKnown RBP3.82□□□□□ -1.8
CCDC6-203ENST00000518638 IGKV2D-40P01614 121 aaPredicted RBP3.82□□□□□ -1.8
CCDC6-203ENST00000518638 CSN1S1P47710 185 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 INPP1P49441 399 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 PKIAP61925 76 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 RRAS2P62070 204 aaPredicted RBP3.82□□□□□ -1.8
CCDC6-203ENST00000518638 TMEM128Q5BJH2 165 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 PRR9Q5T870 116 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 TMUB2Q71RG4 321 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 CLVS1Q8IUQ0 354 aaPredicted RBP3.82□□□□□ -1.8
CCDC6-203ENST00000518638 VCX3AQ9NNX9 186 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 VAX2Q9UIW0 290 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 KIF25-AS1Q9Y6Z4 181 aa3.82□□□□□ -1.8
CCDC6-203ENST00000518638 IGHV3-64A0A075B6Q5 118 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 TRAV21A0A0B4J279 112 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 CENPXA8MT69 81 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 PHOX2AO14813 284 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 PRR3P79522 188 aaKnown RBP3.81□□□□□ -1.8
CCDC6-203ENST00000518638 NEDD8Q15843 81 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 CFAP126Q5VTH2 177 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 IZUMO2Q6UXV1 221 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 SDIM1Q6ZPB5 146 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 Q6ZQT7 251 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 SMIM8Q96KF7 97 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 C20orf85Q9H1P6 137 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 PLAC8Q9NZF1 115 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 NAGKQ9UJ70 344 aa3.81□□□□□ -1.8
CCDC6-203ENST00000518638 MUC2Q02817 5179 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 PANO1I0J062 215 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 HLA-DQA1P01909 254 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 METTL15P1P0C7V9 234 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 LINC00694P0DN24 101 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 FAUP35544 74 aaKnown RBP3.8□□□□□ -1.8
CCDC6-203ENST00000518638 TAS2R30P59541 319 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 CNBPP62633 177 aaKnown RBP3.8□□□□□ -1.8
CCDC6-203ENST00000518638 MIAQ16674 131 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 TMEM14EPQ6UXP3 125 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 ZFP2Q6ZN57 461 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 EXOC3-AS1Q8N2X6 119 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 Q8TAT8 98 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 SPACA4Q8TDM5 124 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 RAB2BQ8WUD1 216 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 SMIM4Q8WVI0 70 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 PTH2Q96A98 100 aa3.8□□□□□ -1.8
CCDC6-203ENST00000518638 NAA50Q9GZZ1 169 aaKnown RBP3.8□□□□□ -1.8
CCDC6-203ENST00000518638 TRAV26-2A0A0B4J265 109 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 A8MWV9 139 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 SSSCA1O60232 199 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 EIF3GO75821 320 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCDC6-203ENST00000518638 S100A5P33763 92 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 TGFBR1P36897 503 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 LSM3P62310 102 aaKnown RBP3.79□□□□□ -1.8
CCDC6-203ENST00000518638 ZNF664Q8N3J9 261 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 ASB13Q8WXK3 278 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 MGST2Q99735 147 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 MCUBQ9NWR8 336 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 PKIGQ9Y2B9 76 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
CCDC6-203ENST00000518638 IGHV3-73A0A0B4J1V6 119 aa3.78□□□□□ -1.8
CCDC6-203ENST00000518638 ANKRD20A5PA0PJZ0 165 aa3.78□□□□□ -1.8
CCDC6-203ENST00000518638 TYMSP04818 313 aa3.78□□□□□ -1.8
CCDC6-203ENST00000518638 NBEAP1P0C6P0 100 aa3.78□□□□□ -1.8
CCDC6-203ENST00000518638 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.78□□□□□ -1.8
CCDC6-203ENST00000518638 GTSF1Q8WW33 167 aa3.78□□□□□ -1.8
CCDC6-203ENST00000518638 SOSTQ9BQB4 213 aa3.78□□□□□ -1.8
CCDC6-203ENST00000518638 DHRS4-AS1Q9P1J3 65 aa3.78□□□□□ -1.8
CCDC6-203ENST00000518638 PSORS1C2Q9UIG4 136 aa3.78□□□□□ -1.8
CCDC6-203ENST00000518638 GNRH2O43555 120 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 SFT2D2O95562 160 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 ANGP03950 147 aaKnown RBP3.77□□□□□ -1.81
CCDC6-203ENST00000518638 PYYP10082 97 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 CAV2P51636 162 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 DSCR10P59022 87 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 AP3S2P59780 193 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 ZNF726P1Q15940 193 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 PRR4Q16378 134 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 FAM74A1Q5RGS3 127 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 MIC13Q5XKP0 118 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 Q6ZN92 141 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 SLC7A5P1Q8MH63 180 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 Q8N377 158 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 HIST1H4GQ99525 98 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 SLC25A21Q9BQT8 299 aaPredicted RBP3.77□□□□□ -1.81
CCDC6-203ENST00000518638 NDFIP1Q9BT67 221 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 LYRM2Q9NU23 88 aaPredicted RBP3.77□□□□□ -1.81
CCDC6-203ENST00000518638 UQCC1Q9NVA1 299 aa3.77□□□□□ -1.81
CCDC6-203ENST00000518638 A0A1B0GW15 77 aa3.76□□□□□ -1.81
CCDC6-203ENST00000518638 TMEM262E9PQX1 116 aa3.76□□□□□ -1.81
CCDC6-203ENST00000518638 SMKR1H3BMG3 65 aa3.76□□□□□ -1.81
CCDC6-203ENST00000518638 H7C1H1 209 aa3.76□□□□□ -1.81
CCDC6-203ENST00000518638 RGS5O15539 181 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms