RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 TRBV6-8A0A0A6YYG3 113 aa7.53□□□□□ -1.2
IGHV3-25-201ENST00000518224 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
IGHV3-25-201ENST00000518224 ZNF56Q15929 161 aa7.53□□□□□ -1.2
IGHV3-25-201ENST00000518224 TOR2AQ5JU69 321 aa7.53□□□□□ -1.2
IGHV3-25-201ENST00000518224 LYZL1Q6UWQ5 148 aa7.53□□□□□ -1.2
IGHV3-25-201ENST00000518224 FAM231DQ6ZW35 169 aa7.53□□□□□ -1.2
IGHV3-25-201ENST00000518224 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
IGHV3-25-201ENST00000518224 NTM-AS1Q6ZSK4 140 aa7.52□□□□□ -1.21
IGHV3-25-201ENST00000518224 MAPKAPK5-AS1Q8N8E1 139 aa7.52□□□□□ -1.21
IGHV3-25-201ENST00000518224 NTN5Q8WTR8 489 aaPredicted RBP7.52□□□□□ -1.21
IGHV3-25-201ENST00000518224 FAM210AQ96ND0 272 aa7.52□□□□□ -1.21
IGHV3-25-201ENST00000518224 TM2D2Q9BX73 214 aa7.52□□□□□ -1.21
IGHV3-25-201ENST00000518224 RPP21Q9H633 154 aaKnown RBP7.52□□□□□ -1.21
IGHV3-25-201ENST00000518224 SMIM17P0DL12 118 aa7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 NTF3P20783 257 aa7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 FOXA3P55318 350 aaPredicted RBP7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 TMEM97Q5BJF2 176 aa7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 CT83Q5H943 113 aa7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 SUMO4Q6EEV6 95 aa7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 GTSF1Q8WW33 167 aa7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 DNAJC30Q96LL9 226 aa7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 RNASE7Q9H1E1 156 aaKnown RBP7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 Q9HAA7 133 aa7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 COX11Q9Y6N1 276 aa7.51□□□□□ -1.21
IGHV3-25-201ENST00000518224 VPS13BQ7Z7G8 4022 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 F5H697 171 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 H7C1H1 209 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 TRGC1P0CF51 173 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 FUSP35637 526 aaKnown RBP eCLIP7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 XGP55808 180 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 KRTAP10-1P60331 282 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 IQCJQ1A5X6 159 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 Q8N1X5 172 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 Q8N814 137 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 FRZBQ92765 325 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 DPH3P1Q9H4G8 78 aa7.5□□□□□ -1.21
IGHV3-25-201ENST00000518224 PSCAO43653 123 aa7.49□□□□□ -1.21
IGHV3-25-201ENST00000518224 SRP19P09132 144 aaKnown RBP7.49□□□□□ -1.21
IGHV3-25-201ENST00000518224 PKIAP61925 76 aa7.49□□□□□ -1.21
IGHV3-25-201ENST00000518224 WFDC2Q14508 124 aa7.49□□□□□ -1.21
IGHV3-25-201ENST00000518224 ELOBQ15370 118 aa7.49□□□□□ -1.21
IGHV3-25-201ENST00000518224 LINC01551Q86U37 167 aa7.49□□□□□ -1.21
IGHV3-25-201ENST00000518224 TPPP3Q9BW30 176 aa7.49□□□□□ -1.21
IGHV3-25-201ENST00000518224 URGCP-MRPS24S4R325 110 aa7.49□□□□□ -1.21
IGHV3-25-201ENST00000518224 A0A087WX48 190 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 FAM231BA6NCW3 169 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 A8MWL6 223 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 SSTP61278 116 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 Q0VG73 95 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 RASL11AQ6T310 242 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 RMI2Q96E14 147 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 PGLYRP4Q96LB8 373 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 SMIM7Q9BQ49 75 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 PRR34Q9NV39 138 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 KLK12Q9UKR0 248 aa7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 SRRM2Q9UQ35 2752 aaKnown RBP7.48□□□□□ -1.21
IGHV3-25-201ENST00000518224 GCSHP23434 173 aa7.47□□□□□ -1.21
IGHV3-25-201ENST00000518224 MPV17L2Q567V2 206 aa7.47□□□□□ -1.21
IGHV3-25-201ENST00000518224 TEX261Q6UWH6 196 aa7.47□□□□□ -1.21
IGHV3-25-201ENST00000518224 ENHOQ6UWT2 76 aa7.47□□□□□ -1.21
IGHV3-25-201ENST00000518224 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.47□□□□□ -1.21
IGHV3-25-201ENST00000518224 EIF5A2Q9GZV4 153 aaKnown RBP7.47□□□□□ -1.21
IGHV3-25-201ENST00000518224 GFRA4Q9GZZ7 299 aa7.47□□□□□ -1.21
IGHV3-25-201ENST00000518224 NIT2Q9NQR4 276 aa7.47□□□□□ -1.21
IGHV3-25-201ENST00000518224 OSTCQ9NRP0 149 aa7.47□□□□□ -1.21
IGHV3-25-201ENST00000518224 GATCO43716 136 aaKnown RBP7.46□□□□□ -1.22
IGHV3-25-201ENST00000518224 MGPP08493 103 aa7.46□□□□□ -1.22
IGHV3-25-201ENST00000518224 TMEM70Q9BUB7 260 aa7.46□□□□□ -1.22
IGHV3-25-201ENST00000518224 SMDT1Q9H4I9 107 aa7.46□□□□□ -1.22
IGHV3-25-201ENST00000518224 TRBV25-1A0A075B6N4 114 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 IGLV5-52A0A0A0MRZ9 124 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 A0A1B0GUV1 79 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 ZNF727A8MUV8 499 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 C9JQL5 133 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 RBX1P62877 108 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 TWIST1Q15672 202 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 FAM74A3Q4VXF1 159 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 Q6ZSA8 131 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 GATD1Q8NB37 220 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 UBE2WQ96B02 151 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 CHCHD5Q9BSY4 110 aa7.45□□□□□ -1.22
IGHV3-25-201ENST00000518224 IGHV1-24A0A0C4DH33 117 aa7.44□□□□□ -1.22
IGHV3-25-201ENST00000518224 TMEM262E9PQX1 116 aa7.44□□□□□ -1.22
IGHV3-25-201ENST00000518224 MIAQ16674 131 aa7.44□□□□□ -1.22
IGHV3-25-201ENST00000518224 KCNIP4Q6PIL6 250 aa7.44□□□□□ -1.22
IGHV3-25-201ENST00000518224 Q8N976 141 aa7.44□□□□□ -1.22
IGHV3-25-201ENST00000518224 V9GYV3 84 aa7.44□□□□□ -1.22
IGHV3-25-201ENST00000518224 IGKV2D-24A0A075B6R9 120 aa7.43□□□□□ -1.22
IGHV3-25-201ENST00000518224 C15orf54Q8N8G6 183 aa7.43□□□□□ -1.22
IGHV3-25-201ENST00000518224 BAALCQ8WXS3 180 aa7.43□□□□□ -1.22
IGHV3-25-201ENST00000518224 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
IGHV3-25-201ENST00000518224 TRBV6-5A0A0K0K1A5 114 aa7.42□□□□□ -1.22
IGHV3-25-201ENST00000518224 A0A1B0GUT8 65 aa7.42□□□□□ -1.22
IGHV3-25-201ENST00000518224 HIGD1CA8MV81 97 aa7.42□□□□□ -1.22
IGHV3-25-201ENST00000518224 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
IGHV3-25-201ENST00000518224 CEBPGP53567 150 aa7.42□□□□□ -1.22
IGHV3-25-201ENST00000518224 RPL23P62829 140 aaKnown RBP7.42□□□□□ -1.22
IGHV3-25-201ENST00000518224 SRSF3P84103 164 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms